Trichosurus vulpecula (common brushtail): 118836754
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Entry
118836754 CDS
T10126
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1
KO
K06491
neural cell adhesion molecule
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tvp04514
Cell adhesion molecules
tvp05020
Prion disease
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
118836754 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118836754 (NCAM1)
09160 Human Diseases
09164 Neurodegenerative disease
05020 Prion disease
118836754 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvp04131
]
118836754 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvp04515
]
118836754 (NCAM1)
04090 CD molecules [BR:
tvp04090
]
118836754 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
tvp00536
]
118836754 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tvp00537
]
118836754 (NCAM1)
04091 Lectins [BR:
tvp04091
]
118836754 (NCAM1)
Membrane trafficking [BR:
tvp04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
118836754 (NCAM1)
Cell adhesion molecules [BR:
tvp04515
]
Immunoglobulin superfamily
NCAM1/2
118836754 (NCAM1)
CD molecules [BR:
tvp04090
]
Proteins
118836754 (NCAM1)
Glycosaminoglycan binding proteins [BR:
tvp00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
118836754 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tvp00537
]
Others
118836754 (NCAM1)
Lectins [BR:
tvp04091
]
I-type lectins (Siglecs)
118836754 (NCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
C1-set
Ig_5
C2-set_3
Ig_VEGFR-1-like_5th
V-set_CD47
VEGFR1-3_N_Ig-like
Collagen_bind_2
Motif
Other DBs
NCBI-GeneID:
118836754
NCBI-ProteinID:
XP_036599842
LinkDB
All DBs
Position
2:complement(132352626..132463773)
Genome browser
AA seq
1165 aa
AA seq
DB search
MRNVNQATTGNSTATVLQTLMESRTPGTLSALPLPTTIPAFQPAAKLSVIKGNNRCEDVS
LQVDIVPSQGEISVGESKFFLCQVAGEAKDKDISWFSPNGEKLTPNQQRISVVRNDDFSS
TLTIYNANIDDAGIYKCVVSGEDSSESEATVNVKIFQKLMFKNAPTPQEFREGEDAVIVC
DVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRNIKKSDEGTYRCEGRILARGEI
NFKDIQVVVNVPPTVQARQSTVNATANLGQSVILMCEAKGFPEPTMSWTKDGEQIEIEED
DKYAFSEDSSELTIRRVDKSDEAEYVCIAENKAGEQDASIQLKVFAKPKINYVENKTAME
LEEQITLTCEASGDPIPSITWRTSTRNISNEEKASWTRPEKQETLDGHIVVNSHVRVSSL
TLKSIQYTDAGEYICTASNTIGQDSQAMYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFA
YPSATISWFRDGQLLPSSNYSNIKIYNSPSASYLEVTPDSENDFGNYNCTAVNRIGQESL
EFILVQADTPSSPSIDEVEPYSSTAQVHFDEPEATGGVPILKYKAEWRVVGEEMWHFKWY
DAKEANMEGIITIMGLKPETTYAVRLSALNGKGLGEISGVSEFKTQPVQGEPSAPKLEGQ
MGEDGNSIKVNLIKQDDGGSPIRHYLVKYRAKLSSEWKPEIRLPSGSDHVMLKALEWNAE
YEVFVVAENQQGKSKAAHFVFRTSAQPTAIPANGSPTTSLGTGAIVGILIVIFVLLLVAV
DITCYFLNKCGLLMCIAVNLCGKAGPGAKGKDMEEGKAAFSKDESKEPIVEVRTEEERTP
NHDGGKHTEPNETTPLTEPELPADTTATVEDMLPSVTTITTNSDTITETFATAQNSPTSE
TTTLTSSIAPPATAIPDSNSVPAGQATPSKGPGVSASSPPPASAPKVAPLVDLSDTPTST
PAASNLSSSVLATQGAVLSPSAPTNVVEASKTPPGNKAVPAPTPTNSTSPLAAVSEPPEA
KQEPATTKGPDPEPTPPSTVKSPTEAATTLTSPKSEAASVNTAKPSQGEDFKMDEGTFKT
PEIDLAKDVFAALGSAAATPAASGQAPELASSPADSSVSPAPTKTEKAPVEGKSAPQETE
TQPAPAEVKTVPNEATQTNGNESKA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgtgaatcaagctaccaccggcaattcaacagccactgtccttcagaccctg
atggagtccaggactcctgggaccctcagtgccctccccctcccgactaccattcctgct
ttccaaccagccgctaagttatctgtcatcaaagggaacaaccgctgtgaagatgtttct
ctacaggtggatattgttcccagccaaggagaaatcagtgttggagaatccaaattcttc
ttatgtcaagtcgctggggaagccaaggataaagacatttcctggttctcccccaatgga
gaaaagctgaccccaaaccagcagcggatctcagtggtacggaatgatgatttttcctcc
acacttaccatctacaatgccaacattgatgatgccggcatctacaagtgcgttgtttca
ggagaggacagcagtgaatcagaggccaccgtcaatgtgaagatcttccagaaactcatg
ttcaagaatgcaccaactcctcaggagttcagggagggagaagatgctgtgatcgtgtgt
gatgtggtcagctcactgccacctaccatcatctggaagcataaaggccgagatgtcatc
ttgaaaaaagacgtcaggttcatagtcctgtccaacaactacctgcagattcgcaacatc
aagaaatcggatgaggggacataccgctgtgagggccggatcttggcccgtggggagatc
aacttcaaggacattcaagttgttgtaaatgtaccacccactgttcaggccaggcagagc
acagtgaatgcaacagcaaaccttggtcagtcagtcatactgatgtgtgaggcgaaaggt
tttccagaacccacaatgagttggacaaaggatggagaacagattgaaatagaggaagat
gacaagtatgccttcagtgaagatagctctgagctgaccatcaggagagtggacaagagt
gatgaagcggagtatgtctgcattgctgagaacaaagcaggagagcaagatgcttccatc
caactgaaagtcttcgcaaaacccaaaattaactatgtggagaacaaaaccgccatggag
ttggaggaacagattactcttacctgtgaggcctcaggagaccctatcccctccatcacc
tggagaacttccacaagaaacatcagcaacgaagaaaaggcttcgtggactcgaccagag
aagcaagagactctggacgggcatattgtggtaaacagccacgtgcgagtgtcatcgctg
acactgaagagtattcagtacacagacgccggagagtatatctgcacagccagcaacacc
attggccaggattcccaggctatgtacctcgaagtacaatatgcccccaagcttcagggc
cccgtggctgtgtatacctgggaagggaaccaggtcaacatcacctgtgaggtatttgcc
tatcccagtgccaccatctcctggttccgagatgggcaactgctgccaagctccaactac
agtaatatcaagatttacaacagcccttctgccagctacctggaggtgacccccgactct
gagaatgactttggaaactacaattgtactgcagtgaaccgtattggtcaagagtcctta
gagttcatccttgtccaagcagatactccatcttcaccatccattgacgaagtggagcca
tattccagcacggcacaggttcactttgatgagcctgaggccacaggcggggtgcccatc
ctcaagtacaaagccgagtggagagttgtgggtgaggagatgtggcatttcaagtggtat
gatgccaaggaagcaaacatggaaggtatcatcaccatcatgggcctgaagccagagaca
acttacgccgtccgactgtctgccctcaatggaaagggactgggggagatcagtggggtc
tccgagttcaaaacacagccagtccaaggagaacccagtgcacccaagttggaaggacag
atgggagaagatggcaactctattaaagtgaacttgatcaaacaggacgatggagggtcc
cccatcagacactatctggtcaagtatagagcgaagctgtcttcagagtggaaacctgag
atcagactcccctcaggcagcgaccatgtcatgctcaaagccctggaatggaatgcggag
tacgaggtctttgtggtggctgagaaccagcaggggaaatccaaggcagcccattttgta
tttagaacctctgcccagcccacagctatcccagccaatggcagccccaccacaagcctg
ggcaccggtgccattgtgggtatcctcattgttatctttgtcctcctcttggtggctgtg
gacatcacctgctacttcctgaataagtgtggcttgctcatgtgtattgctgtcaacctg
tgtggaaaagctggcccaggagccaaaggaaaagacatggaggaaggcaaagctgcattc
tcgaaggatgagtccaaggagcccatagtagaggtgcggacagaagaggagcggacccca
aaccatgatggagggaaacatacagagccaaatgagaccacgccactgacagaaccagag
ctgccagctgacaccacagccactgtcgaggacatgctgccttctgtcaccaccatcacc
actaactctgatactatcaccgaaacttttgccactgctcagaacagccccaccagtgag
accacaaccctgacttctagcattgcccctccggccactgccattccggattcaaattca
gtgccagctggccaggccactccctctaagggcccaggggtgtctgcctcctccccacca
cctgcgtcagcccccaaagttgccccccttgttgacctgagcgataccccaacctcaact
cctgcagctagcaatttgtcttctagtgttctggccacccagggggctgtcctcagcccc
agcgcccccaccaatgtggtagaggcctccaagactcctcctgggaataaggcagtccca
gctccaacccctaccaattccactagtcccctggctgctgtttcagagccccccgaggcc
aaacaggagccagccaccaccaaaggcccagacccggagcccactcctcccagcacggtg
aagagcccgacagaggcagccacgaccctcactagcccgaagagtgaagctgcctccgtc
aacactgcaaaaccctcccagggcgaggactttaaaatggacgaagggaccttcaagacc
ccagagattgaccttgcaaaggatgtctttgcagccctgggctctgctgctgccacccct
gcagcgagtgggcaggctcctgagcttgcttcttcccctgcagacagctctgtgtcgcct
gcaccaacaaagaccgagaaagcccccgtagaaggaaagtctgcaccccaggagacagaa
acccagccagctccagcagaagtcaagacggtccccaacgaagccacacaaacaaacggg
aatgagagcaaagcgtga
DBGET
integrated database retrieval system
