Trichosurus vulpecula (common brushtail): 118837420
Help
Entry
118837420 CDS
T10126
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04120
Ubiquitin mediated proteolysis
tvp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118837420 (UBE4B)
04120 Ubiquitin mediated proteolysis
118837420 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvp04121
]
118837420 (UBE4B)
Enzymes [BR:
tvp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118837420 (UBE4B)
Ubiquitin system [BR:
tvp04121
]
Ubiquitin ligases (E3)
U-box type E3
118837420 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
118837420
NCBI-ProteinID:
XP_036600180
LinkDB
All DBs
Position
2:complement(19006695..19155021)
Genome browser
AA seq
1355 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLTSPQRENPPGPPVAAPAPGPSHNLGLNVHNM
TPATSPIGASGVTHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRTLSDKELSSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
TSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIATAARSPD
RNLMLSTGSNPGTSPMFCNVASFNASSLSSLYDTSPTPNTPFSSYVPVTSSSCASPSNAT
APISVPSISLSPHIPGESPAGSQASSPRYRPYTVAPPWGFSTSPTPRSSSLSALSSSPNP
PALSTSPSRQRSTAMGPPLFPASPGPMSRRPSTLRIPSSTYDHPFSFLFLALSDMSGDSS
DEENEDDDGDDEDEDEGGGGDDDFACIQFGSSLGASGGASASDSCSDHFTIETCKETDML
NYLIECFDRVGIEERKAPKMCSQPAVSQLLSNIRSQCISHAALVLQGSLTQPRSMQQQSL
LVPYMLCRNLPFGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMA
LGELCEIKFGKTHPICSLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSLSVFAEDDAKV
VEKYFSGPAITLENTRVVSQSLQHYLESARQELFKILHSILLNGETREAALSYMAAIVNA
NMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETIDPTYIFHPRCRIVLPSDETRV
KATMEEVTSWMTELYGDQSPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELN
RTVEDLKNNENQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFY
GIVIQLLLRILDPAYPHITLPLNPDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPC
TQDIAMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLV
PSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYI
NMLINDTTFLLDESLESLKRIHEVQEEMRNKEQWDLLPRDQQQARQSQLAQDERVSRSYL
ALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFE
PKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVILKMRKAGIKSTIAIEKFKLL
AEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPT
DPFNRQMLTESMLEPVPELKEQIQAWMREKQNTDH
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgacgagatccgacggaggcgccttgctcgacttgctggtgga
cagacttcacagccctctaccccacttacctctccacagagagaaaacccaccaggccct
cctgtagcagcaccagccccaggcccttcccataatcttggtctaaatgtccacaacatg
accccagctacctccccaataggtgcatcaggagtcacgcatcgaagccagagcagtgaa
ggagtcagttcgctcagcagctcaccgtctaatagccttgaaacgcagtcacagtctctc
tcacggtcccagagcatggatatcgacagtgtctcctgtgagaaaagcatgtcccaggtg
gatgtagattcaggaattgaaaatatggaggttgatgaaaatgatcgcagagaaaaaagg
accctctctgataaggaactgtcatcgggttctgaggtatcagaagaacaggccttacag
ctggtctgtaagatctttcgtgtctcttggaaagaccgggacagagatgtcatctttttg
acttcgctttctgcacaatttaagcagaatccaaaagaagtgttctcagattttaaggat
ttgattggccagattttaatggaagtgctaatgatgtccactcaaactagagatgagaat
ccttttgccagtctgactgcgacttcccagccgattgcaactgcagctcggtcaccggac
agaaacctgatgcttagtacaggatccaatccaggaacgagccccatgttctgtaatgtg
gcttccttcaatgccagctcactgtccagcctctatgacactagcccaactcccaatacc
cctttctcaagctatgtgccagtgacgagttcctcctgtgcctcaccttccaatgcaacc
gctccgatatctgtgccttccatttcgctcagtcctcatattccaggagaaagtcctgca
ggaagccaggcttcgtctccgaggtatcgcccttacactgtggcccctccctggggcttc
tcgacttctcccaccccgcggtcctcgagcctctctgctttgtctagctcaccaaacccg
cctgccctgtcgaccagcccttccagacaaagatccacagccatgggcccacccttgttt
cctgcttctccaggtcccatgagcaggcgtccctctaccctaaggattccttctagtacg
tacgaccatcctttctccttcctcttcctcgcactttctgatatgtctggggacagtagc
gatgaagaaaatgaagatgatgatggtgatgatgaggatgaggatgaaggtggtggtggt
gatgatgattttgcttgtatccagtttgggtccagtttgggagcctctggtggggcgagt
gcttctgattcctgcagcgaccatttcaccattgaaacgtgcaaggagacagacatgctg
aactacctcatcgaatgttttgacagagttggaatagaggaaagaaaagcaccaaagatg
tgcagccaaccggcggtcagccagttactgagcaacatccgctcacagtgcatatcccat
gctgcgttagtgttacagggctcattaacgcaaccaaggtccatgcagcagcagtctctc
ttggtaccctatatgctgtgtaggaacctcccatttggtttcatccaagagctggtgaga
acaacccaccaggatgaagaagtgttcaaacagatctttatccctattttacaaggtttg
gctcttgctgccaaagagtgctcccttgatagtgactactttaaatacccccttatggca
ttaggtgaactctgtgaaattaagtttgggaaaacccatcccatttgtagtttggtcgcc
tctttgcctttgtggctgccgaagtccttaagcccgggttctgggcgggagttgcaaaga
ctctcttatttgggggccttcttcagtctctccgtctttgccgaagacgatgcaaaggtg
gttgaaaagtatttctcagggcctgccattaccctagagaacacccgagtggtcagccag
tcactacaacattatttggaatcagccagacaagaattgttcaagattctacatagtatt
ttgctgaatggtgaaactcgtgaggcagctctcagttacatggcagctattgtcaatgcc
aacatgaagaaggcacagatgcagacagatgaccggttggtgtctacggatggatttatg
ctgaatttcctttgggtgctgcagcagttaagcacaaagatcaagctggaaacaatagat
cccacctatatattccatccacggtgtcgtatcgttcttccaagtgatgagacacgagtg
aaagcaacaatggaggaggttacgagttggatgactgaactttatggagatcagtctcca
ttttctgagccgaaattccctacagaatgcttcttccttacgctgcatgcccaccacctc
tctattttgccaagctgtcgtcgatatatacgcagactccgggccatcagggagcttaac
agaactgtggaagatcttaaaaacaacgaaaatcaatggaaagattccccactggcaacc
agacatcgggaaatgttgaaacgttgcaaaactcagctcaagaagttggtgcgatgcaaa
gcctgcgccgatgcaggtttgctggacgaaaacttcctgcgcagatgtctgaatttctat
ggcatcgtaatccagctgctgctgcgcatccttgaccctgcctatcctcatatcacactg
cctttaaatccagatgtccctaaggtgtttgcagcattgcctgagttttacgtggaagat
gttgctgaatttttattttttattgtacaatactcacctcaggtgctgtatgagccctgt
actcaggatatcgccatgttccttgttgtgatgctctgcaaccagaactatatccggaat
ccatacttggtggccaaattggtggaggtcatgttcatgaccaacccttctgtccagccg
cggacccagaagttctttgaaatgatagagaaccaccctctttccaccaagctgctagtc
ccctcactgatgaagttttatacagatgttgagcacactggagccaccagcgagttctat
gacaaattcacaatccgataccatatcagcaccatttttaaaagtctctggcaaaacata
gcccaccatggcacctttatggaagagttcaattctgggaagcagtttgttcggtacata
aacatgctgataaatgacacaacatttttattggatgagagtctggagtccttgaagcgg
atccatgaagtgcaagaagaaatgaggaacaaggagcagtgggacctgctgccccgggac
cagcagcaggctcgtcagtctcagctcgctcaggacgagcgtgtgtctcgctcatatctt
gcactagcaacagaaacagtggatatgtttcatattctcaccaagcaagtccagaagcct
ttcctcagacctgaacttggaccacgcttggctgctatgctgaattttaatcttcagcaa
ctctgtggccccaagtgccgtgacctgaaagtggaaaaccctgagaaatatgggtttgaa
ccaaagaagctcttggaccaattgacggatatttacttgcagctagactgtgcccgcttt
gctaaggctattgcagatgaccagagatcatatagcaaggaactatttgaagaggtgatt
ttgaagatgcgcaaagcaggaataaagtccacaatagcaatagagaagtttaagctgctg
gcagagaaggtggaggaaatagtagccaagaatgcccgggccgaaattgattacagtgat
gctccagatgaattcagagacccgttaatggacaccctaatgactgatcctgtgaggttg
ccctctggcaccatcatggaccgctcaatcattcttcggcacctgctgaattcacccacc
gaccccttcaatcgacagatgctgacagagagcatgctggagccagtgccagaattgaaa
gaacaaatccaagcctggatgagagagaaacagaacactgatcattag
DBGET
integrated database retrieval system
