Trichosurus vulpecula (common brushtail): 118837435
Help
Entry
118837435 CDS
T10126
Symbol
SCN3A
Name
(RefSeq) sodium channel protein type 3 subunit alpha
KO
K04836
voltage-gated sodium channel type III alpha
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
118837435 (SCN3A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvp04040
]
118837435 (SCN3A)
Ion channels [BR:
tvp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118837435 (SCN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
SieB
FraC
Motif
Other DBs
NCBI-GeneID:
118837435
NCBI-ProteinID:
XP_036600204
LinkDB
All DBs
Position
2:complement(217789612..217905839)
Genome browser
AA seq
2003 aa
AA seq
DB search
MAQALLVPPGPDSFRYFTRESLAAIEKRSAEEKAKKAKRELKEDDDENKPKPNSDLEAGK
SLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPLNPVRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPGNSTFETNITSYFNSTI
DINGTSVNTTMTTFNWKEYIEDKSHFYYLDGQSDALLCGNSSDAGHCPEGYICVKAGINP
NYGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAVAAASAASRDFSGIGGLG
ELLESSSEASKLSSKSAKERRNRRKKRKQKEQPGGGQGESDKFPKSESEDSVRRSFHISV
DGSRLNYEKRFSSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDVGSENDFADDEHSTF
EDNESRRDSLFVPHRHGERRHSNVSQASMSSRMVVPVLPANGKMHSTVDCNGVVSLVGGP
STLTSPTGHLPPEGTTTETEVRKRRLSSYQISMEMLEDSSGRQRAMSIASILTNTMEELE
ESRQKCPPCWYRFANTFLIWDCWDPWLKVKRIVNLIVMDPFVDLAITICIVLNTLFMAME
HYPMTQQFNSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKK
EIRECVQKAFVGKPKAIEIKVLEGNKIESCISNNTPVEISKDLNYLKDGNGTTSGVGTGS
SVEKYIIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESELEESKEKLNASSS
SEGSTVDVAPPREGEQAEIEPEEDLEPEACFTEGCIKKFPFCQVSTEEGKGKIWWNLRKT
CYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLK
WVAYGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRF
EGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNVTTGTMFEVKEV
NNFTDCQALGDQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSREVKQQPEY
EVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKIRGSQDIFMTEEQKKYYNAMK
KLGSKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSDDMTSI
LSRINLVFIVLFTGECVLKMISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSP
TLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNF
AYVKKEYGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPETIHPGSSV
KGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVW
EKFDPDATQFIEYSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFT
KRVLGESGEMDALRIQMEDRFMASNPSKVSYEPITTTLKRKQEEVSAAIIQRNFKCYLFR
QRLKKVPNDYNNDNGKGRVELPIKEHLIIDKLNGNTTPEKTDESSSTTSPPSYDSVTKPD
KEKFEMDRLENGSKGKDVRENKK
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgctggtacccccaggacctgacagcttccgctattttactagagaa
tctctcgctgctattgaaaaacgctctgcagaagagaaagctaagaaggccaaaagagaa
ctcaaagaggatgatgatgagaataaaccaaagccaaatagtgacttggaagcaggaaaa
tctctcccatttatttatggagacatcccacctggaatggtgtcagagcccttggaggac
cttgacccatactatatcaataaaaaaacttttatagtattgaataaaggaaaggcaatc
tttcgattcagtgccacatctgccttgtatattttaactcctctcaaccctgttagaaaa
attgctattaagattttggtacattctttattcagcatgctcattatgtgcactattctg
accaactgtgtgtttatgaccatgagtaaccctccagactggacaaagaatgtagagtac
actttcacaggaatttataccttcgaatcacttataaaaattttggcaagaggtttctgc
ttagaaggctttacttttctccgtgatccatggaactggctggatttcagtgtcattttg
atggcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctctgaaaactatttctgtaatcccaggtttaaagactattgtgggggcc
ctgatccagtcagtgaagaagctttcggatgtcatgatcctgactgtgttttgtctgagt
gtatttgctctcattggactgcagctgttcatgggcaacctgaggaataaatgtttgcaa
tggcccccaggcaattctacttttgaaacaaacattacttcctactttaatagtacaata
gatataaatgggacatctgttaatacaacaatgaccacatttaactggaaggaatacatt
gaagataaaagtcatttttattatttagatggacaaagtgatgctttactctgtggaaat
agctcagacgcaggtcactgtccagaaggatatatatgtgtgaaagctggtataaatccc
aattatggatacactagttttgacaccttcagttgggccttcttgtctttgttccgacta
atgactcaagattactgggaaaacctttaccagctgacactacgtgctgcaggaaaaaca
tacatgatattttttgttctggttattttcctgggctcattctatttggtgaacttgatc
ctggctgtggttgccatggcttatgaggagcagaaccaggccactttggaagaggcagag
cagaaggaggctgagtttcagcaaatgctggaacaacttaagaagcaacaagaagaagcc
caggcagtagcagcagcatcagctgcatcaagagatttcagtggaataggtgggctaggg
gagctcttggaaagttcttcagaagcatcaaaattgagctcgaaaagtgctaaagaaaga
agaaatagaaggaagaaaagaaaacagaaggagcagcctggtggaggtcaaggagaaagt
gataagtttcccaaatctgaatctgaagatagtgtcagaagaagtttccacatatctgtg
gatggaagccgactgaattatgaaaagagattctcttctcctcatcagtctctgctgagc
atccgtggctccctgttttccccaaggcgtaatagcaaaacgagcattttcagcttcaga
ggtcgagcaaaggatgtcggctctgaaaatgattttgctgatgatgagcacagcacattt
gaagacaatgagagcaggagagattcactctttgtgccgcacagacatggagaacgacgc
cacagtaacgttagtcaggccagtatgtcatccaggatggtggtgccagtgcttccagcc
aatgggaagatgcacagcactgtggattgcaatggtgtggtttccttggtgggtggacct
tcaacacttacgtcacctactggacatcttccaccagagggcaccactacagaaactgaa
gtgagaaaaaggcggttaagttcttaccagatttctatggagatgctagaagattcctct
gggaggcaaagagctatgagtatagccagcatattaaccaacacgatggaagaacttgaa
gaatccaggcagaaatgtccaccatgttggtatagatttgctaatactttcctcatctgg
gactgctgggatccatggttaaaagtgaaacgcattgttaatctgattgtgatggatcca
tttgttgatcttgccatcaccatctgcattgtcttaaacactctatttatggccatggaa
cactatcctatgactcagcaattcaacagtgtgctgtctgtaggaaacctggtatttact
ggaatcttcacagctgaaatggttctcaagataattgccatggatccatattattatttc
caagagggttggaatatctttgacggcattattgtcagccttagtttaatggagctcggc
ttggccaacgtggaaggattgtcagttctccgatcatttagactgctccgggttttcaag
ttggcaaaatcttggccaacactgaacatgctgataaagatcattggcaactcagtgggg
gctctgggaaacctgactttggtgttggccatcattgtcttcatttttgctgtggttggc
atgcagctctttggcaagagctacaaagaatgtgtctgcaagatctccagcgattgtgaa
cttccacgctggcacatgcatgacttcttccattccttcctcattgtattccgggtgctg
tgtggagaatggatagagaccatgtgggactgtatggaggtggcaggccaaaccatgtgc
cttattgttttcatgttggtcatggtgattgggaacctagtggtactgaatctgtttctg
gccttgctgctgagctcatttagttcagacaatcttgctgctactgatgatgataacgaa
atgaacaatctccagattgctgtggggagaatgcagaaggggatagattatgtgaaaaaa
gaaattcgggaatgtgtccaaaaagcctttgttggaaagccaaaagctatagaaatcaaa
gtccttgaaggcaataagatagaaagttgcatttccaataatactccagttgaaataagc
aaagaccttaattatctgaaagatggtaatggaactaccagtggtgtaggtacaggaagc
agcgtggaaaaatatataattgatgaaaatgattacatgtcattcataaacaaccccagc
cttactgtaacagtaccaattgcagttggtgaatctgattttgaaaacttaaatactgaa
gatttcagcagtgaatcagaactggaagaaagcaaagagaaattaaatgcatccagttca
tctgaaggcagcacagttgatgttgcccctcccagagaaggtgaacaagcagaaattgaa
ccagaagaagaccttgaaccagaagcctgttttactgaaggctgcataaaaaagttccca
ttttgtcaagtaagtacagaagaaggcaaaggaaaaatctggtggaatcttaggaaaacc
tgctacagcattgttgaacacaactggtttgagacatttattgtcttcatgatcctactt
agcagtggtgctctggcttttgaagacatttacattgaacaacgaaagaccattaagaca
atgttggaatatgctgacaaagtcttcacttatatcttcattttggaaatgcttctaaaa
tgggtggcttatggttttcaaacatacttcactaatgcctggtgctggctggatttcttg
attgttgatgtatcgttggtcagcttggtagccaatgctctgggctattcggaacttggt
gccatcaaatcccttcgaacactaagagcattaagacctctgagagcattgtccaggttt
gagggaatgagggtggttgtgaatgctctggttggagccattccctccatcatgaatgtc
ctcttggtttgtctcatattctggctcatcttcagtatcatgggagtaaatttgtttgct
ggcaaattctaccactgtgttaatgtcacaactggtaccatgtttgaagttaaggaagtc
aacaattttactgactgtcaggctcttggagaccaggctcggtggaaaaatgtgaaagta
aactttgataatgttggagctggatatcttgccctgcttcaagtggccacgtttaaagga
tggatggatattatgtatgcagctgttgattcacgagaagtaaaacaacaacctgaatat
gaagtcaatttatacatgtatttatactttgtcatctttatcatttttgggtcatttttt
actctgaacctatttattggtgtcatcatagataacttcaaccagcaaaaaaagaagata
agaggaagtcaagacatttttatgacagaggaacagaaaaaatattacaatgcaatgaag
aaactaggatcgaagaaaccccagaaacctatccctagaccagcaaataaattccaggga
atggtctttgattttgtaaccagacaagtctttgatatcagcatcatgattctcatctgc
ctcaacatggttaccatgatggtggagactgatgaccagagtgatgatatgactagcatt
ctgtcccggattaacctggtgttcattgtcctcttcactggagaatgtgtgctgaagatg
atctccctccgtcattactacttcaccataggatggaacatttttgattttgtggtggta
atcctttccattgtaggtatgtttctagctgaaatgatagaaaaatattttgtgtcccct
accctgtttcgagtgatccgtcttgccagaattggccgaatccttcgtctcattaaaggg
gcaaaggggatccgcacgctgctctttgctttgatgatgtccctccctgctctgtttaac
atcgggctcctgctcttcctggtcatgtttatctatgctatctttggaatgtccaatttt
gcttatgttaagaaagaatatgggattgatgacatgtttaactttgaaacctttggcaac
agcatgatctgcctcttccaaattaccacatctgctggttgggatggtttgcttgcaccc
attcttaacagtggaccaccagactgtgacccagaaacaattcaccccggaagttcagtc
aaaggagattgtggcaacccctctgttgggattttcttttttgtcagttacatcatcatc
tcattcctggtggttgtaaatatgtatatcgctgttatcctggagaatttcagtgttgct
acggaagagagtgctgagccattgagtgaggatgactttgagatgttttatgaggtttgg
gagaagtttgatcctgatgccacccaattcatagaatacagtaaactctctgattttgca
gctgccctggatccacctcttcttatagcaaaaccaaacaaagtccagctcatagccatg
gatctgcccatggtaagtggggacagaattcactgtcttgacatcttatttgcttttaca
aagcgtgttttgggtgagagtggagagatggatgctctcagaatacagatggaagatcga
tttatggcatctaatccttccaaagtctcctacgagcctattacaactactttgaaacgg
aaacaagaagaggtttctgctgctatcattcagcgtaatttcaaatgctatctttttaga
caaaggcttaaaaaggtaccaaatgactataataatgataatggtaaaggtagggtagaa
ctacctattaaagaacatttaattattgataaactaaatggtaacaccactccagaaaag
acagatgaaagttcctctacaacttctccaccttcatatgatagtgtaacaaaaccagac
aaagaaaagtttgaaatggacagactagaaaatggaagtaaaggaaaagatgtcagggaa
aataaaaagtaa
DBGET
integrated database retrieval system
