Trichosurus vulpecula (common brushtail): 118837717
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Entry
118837717 CDS
T10126
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118837717 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tvp04812
]
118837717 (CLASP1)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118837717 (CLASP1)
Cytoskeleton proteins [BR:
tvp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
118837717 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
HEAT_GCN1
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_MROH2B_C
TPR_CAND1
TOR1L1_N
Sec7-like_HUS
Cnd1
VPS15-like_hel
TPR_DNAAF5
Ltn1_1st
HEAT_DAAF5
RTP1_C1
MMS19_N
MMS19_C
ParcG
KH_DEAH11_1st
TAN
Motif
Other DBs
NCBI-GeneID:
118837717
NCBI-ProteinID:
XP_036600665
LinkDB
All DBs
Position
2:complement(303872302..304229619)
Genome browser
AA seq
1597 aa
AA seq
DB search
MEYRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVALLGMDILSALVSRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKMME
QAASPQYVWDRMLGGFKHKNFRTREGVCLCLIATLNASGAHTLTLSKIVPHICNLLGDPN
GQVRDSAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDDVQRSGNMIQSASDKN
FDDEDSVDGNRPPSASSSTSSKAPPSSRRNIAMGTTRRVGPVALGSKSSATKEGAGAVDE
EDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVTALKKIRSLLLAGAAEY
DNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIP
NSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHS
LERHISVLAETIKKGIHDADSEARIEARKCYWGFHNHFSREAEHLYHTLESSYQKALQSH
LKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSSTSRASTVSTKSVSTTGSLQRSR
SDIDVNAAASAKSKVSTAGSTPFSSAAALPPGSYASLESRHIREDMEYIGLEPGRIRTRR
QSSGSAVSVTTTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSSYGGLTGGS
ARGTPMPSSSDKRSKIPRSQGCSRETSPSRLGGQARSSRIPRPSMSQGCSRDTSRESSRD
TSPARGFPPLDRFGLGQPGRMPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRR
YEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEG
LLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDW
LFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVK
VAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKPQLQHSRVGEDFPA
RSASTSGPGEGNLEEKCKQAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLK
NSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGGLSPSRFWGWSADGLSKHPPPL
SQPNSIPTAPSHKTFRRSYSPSMLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQEDLNE
PIKRDGKKDCDIVSRDGGIASPATDLRGGSDVVEGGRTALDNKTSLLNTQPPRAFTGPRT
RDYNPYPYSDTINTYDKTALKEAVFDDDMDQLRDVPIDHSDLVADLLKELSNHNERVEER
KGALLELLKITREDNLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARF
KNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLA
AIKMQTKVIERISKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKP
HLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atggagtaccgaatggagtcttgcttggcacaggtgttgcagaaagatgtggggaaacga
ctacaagtgggccaagagttaatagactatttctcagacaagcagaagtctgccgatctc
gagcatgaccagaccatgttagataagcttgtggatggacttgccacttcttgggtgaac
tctagtaattataaggttgcacttctggggatggacattttgtcggctctggtgtctcgg
ctgcaggatcggtttaaagcccaaattggcacagtgctacccagtctaattgacaggttg
ggcgatgctaaagattcagtgagagagcaagaccagaccctgctgctgaagatgatggaa
caagctgccagccctcagtatgtatgggacagaatgttaggagggttcaaacacaagaat
ttccgcaccagagaaggtgtttgtctctgccttattgcaacactgaatgcctctggagcc
catactttaacgctaagtaagattgtgccacatatatgtaatttgcttggagatccaaat
ggccaggttcgagactcagcaataaacagcttagtggaaatttacagacatgtaggagaa
cgtgtgagggcagatctcagtaaaaaaggattaccacagtctcggttaaatgtaattttt
acaaaatttgatgacgtccaaagatctggtaacatgatacagtctgcaagtgataagaat
tttgatgatgaagactctgtggatgggaacaggcctccttcagccagctcttctacatct
tcaaaggcccccccaagctcacgaagaaacattgcaatgggaaccactcgccgcgttgga
cctgttgctctaggatctaagtcgtctgctacaaaagaaggagctggtgctgttgatgaa
gaggacttcattaaagcatttgatgatgtaccagtagtacagatttattccagtcgagat
cttgaagaatctataaataaaattagagaaatcttatctgatgacaaacatgactgggaa
cagagagtaacagctctgaaaaagattcgatcattacttctggctggagctgctgaatat
gataatttctttcaacatttgcgtctgttggatggagcatttaaattatctgctaaagac
ctgcggtctcaagttgtccgggaagcttgtatcacgctggggcatctgtcgtcagtcctt
ggaaacaagtttgatcatggagctgaagccatcatgccaaccatctttaatttaatccca
aacagtgccaaaatcatggccacatctggtgttgtagctgttaggttaattattcgacat
acacacatccctaggctaatacctgttataactagcaactgtacgtccaaatctgttgca
gtaagaaggcgctgttttgaatttttagatttgcttttacaagaatggcaaacacattca
ttagaaagacacatatcagtattagcagaaacaataaagaaaggaatacatgatgctgat
tctgaagcaaggatagaagcaagaaaatgttattggggtttccacaatcacttcagtaga
gaagcagaacatttataccataccttggagtcatcttatcaaaaagctttgcagtcacat
ctgaagaactcagacagcattgtgtccttgcctcagtccgatcgttcctcttctagttct
caagagagcctaaaccgtccactgtctgccaaaagaagcccaactggaagttccacatct
cgagcttctacagttagtaccaaatctgtttcaacaactggatccctgcagcggtctcgg
agtgacattgatgtgaatgcagcagccagtgccaaatcaaaagtctcaactgctggctcc
acccctttcagttcagcagctgccttgcctccaggctcatatgcatcgttagaatccaga
cacatcagggaggacatggagtacataggccttgaaccaggccggatacgcacgcgacgg
cagagctctgggagtgcagtcagtgtcaccaccacccctgataaccgtggccgcagcaga
gccaaagtggtttcacagtcccagcgatccagatctgctaatcctgctggtgctggtagc
cgatcaagctccccaggaaaactgttgggaagttcttatggtggacttacgggcggatct
gccagaggtacacctatgccctcatcctcagataaacgaagcaagatcccaagaagtcag
ggatgtagtcgagaaacaagtcctagccgcttgggtggacaagcacggagcagccgtatc
cctcgacccagcatgagtcaggggtgcagccgcgataccagccgtgagagcagccgagat
acaagccctgctcggggcttccctccactggatcggtttgggcttgggcagccgggaagg
atgcctggttctgtcaatgccatgcgagttctaagtacaagcacagatctggaagcagct
gtcgctgatgctttgctattaggagactccaggagcaagaaaaagccagtgaggagaaga
tatgaaccatatgggatgtattctgatgatgatgctaacagtgatgcatcaagtgtttgc
tcagagcgttcttatggctccagaaatggtggaattcctcactacctacgacagactgaa
gatgtagcagaggttctaaaccactgtgctagttcaaactggtctgaaagaaaagaagga
cttcttggattgcagaacttactgaagagccagagaacactaagtcgagttgaattaaaa
aggctatgtgaaatcttcactcgaatgtttgctgatcctcacagcaagagagttttcagt
atgttcctggaaactctagtggactttattataatccataaagatgacttgcaagactgg
ctttttgttcttctgacacagttacttaagaaaatgggagcagatttacttggatctgta
caagcaaaggttcaaaaggctctggatgtaacaagggattcctttccatttgatcagcag
tttaacattttgatgagatttattgtggatcagacacaaacgccaaaccttaaggtcaaa
gttgcaattctgaaatacattgagtctctggccaggcagatggatccaacagactttgta
aactctagtgagacaaggcttgctgtttcaagaattataacctggacaacagaaccaaag
agttcagatgtgagaaagcctcagctacagcatagtcgggtaggtgaggatttcccagct
aggtcagcttcaacctctgggcctggagaaggaaacttggaagaaaaatgtaaacaggca
gcacaaattgttctgatttctctgtttgaactgaatactccagagtttaccatgttactt
ggtgccttgccaaaaacattccaggatggtgccaccaaactcctacacaaccacctgaag
aattccagtaacacaagtgtgggctctccaagcaataccattggtcgaactccttcaaga
cacaccagtagcagaaccagccccttgacttcacctaccaactgttcccatggtggtctg
tcaccgagtcggttctggggttggagtgccgatgggctgtcgaagcacccacctcccctt
tctcagcctaactccatccccacagctccttcccacaagactttcaggcgctcttactct
cccagcatgctggactatgacacagagaacttgaactcagatgaaatctacagctctctg
cgtggagtaacagaagccatagaaaagtttagtttccggagccaggaggatctgaatgag
cctattaagcgggatggcaaaaaagactgtgatattgtttcacgagatggtgggatagct
tcgcctgccactgatctgcgaggaggaagtgatgtagtagaaggaggaaggacagctctc
gataacaaaacctcactcctcaacacccagcctccacgagcctttactgggccccgaact
cgagactataatccctatccctactccgatacaatcaacacctatgacaagacagctctg
aaagaagccgtatttgatgatgacatggatcagcttcgtgatgtacccattgaccattct
gatttggtagctgatctcctgaaagaattatccaatcacaatgaacgggtggaagaaagg
aaaggagccttattagaattactcaagatcacccgagaagataacctaggagtttgggaa
gaacacttcaaaacaattttgctcttgctgctagaaacacttggagataaagatcattcg
atacgggcattggcattgcgagtattacgggaaattctgagaaaccaaccagcaagattt
aaaaactatgctgaactgacaatcatgaaaacactggaggcacataaagattcccacaaa
gaggttgtgagagctgcagaggaggctgcttcaacattggccagttctatacaccctgag
cagtgtatcaaagtgctttgcccaatcatccagactgcagactaccccatcaatctagct
gccattaagatgcagaccaaagttatcgagaggatttccaaggaatctttgcaccagctc
ctccctgacatcatcccaggcttgctacagggctatgacaacactgaaagtagtgttcgt
aaggccagtgtgttttgcttagtggcaatttattctgtaattggagaagaactgaagcct
caccttgcacagctcacagggagcaagatgaagctattaaatttgtatataaagagggcc
cagaccaccaatagcaacagcagttcatcttcagatgtttcgacgcacagttaa
DBGET
integrated database retrieval system
