Trichosurus vulpecula (common brushtail): 118837810
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Entry
118837810 CDS
T10126
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04270
Vascular smooth muscle contraction
tvp04360
Axon guidance
tvp04611
Platelet activation
tvp04625
C-type lectin receptor signaling pathway
tvp04810
Regulation of actin cytoskeleton
tvp05135
Yersinia infection
tvp05152
Tuberculosis
tvp05163
Human cytomegalovirus infection
tvp05200
Pathways in cancer
tvp05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118837810 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
118837810 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
118837810 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
118837810 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
118837810 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118837810 (ARHGEF12)
05205 Proteoglycans in cancer
118837810 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
118837810 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
118837810 (ARHGEF12)
05152 Tuberculosis
118837810 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvp04131
]
118837810 (ARHGEF12)
Membrane trafficking [BR:
tvp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118837810 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
118837810
NCBI-ProteinID:
XP_036600800
LinkDB
All DBs
Position
2:complement(269410540..269613453)
Genome browser
AA seq
1537 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHASILTRESPTDKKQKVERSTSHDFDPTDSSSKKTKSSSEE
SRSETYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVEPTAFGHMSPIMTSPHSPG
TSGNTERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYSRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVVISSKTSGDSLLLSEVEADSGDGLGRIDYSSGDGS
RPNSDIADSPRGGLKERIYLEESPEKSEMVPDNDTQSNIGSPLIRTAPQIIGAEDDDFGT
EHEQINGQCSCFQSIELLRSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRAAHLKVSVPDEISLDLEKRRPELIPEDLHRHYVQTMQDKVYPEVQKHL
EDFRQKRSMGLTLAESELTKLDADRDRDRVTLEKERACAEQIIAKIEEVLMTAQAVEEDK
SSTMQYVILMYMKHLGVRVKEPRNLEHKRGRIGFLPKIKQSIKKDREGEEKVKRRGFPSI
LGPPRRPSRHDNSAIGRAMELQKQRHPKHLPTPSSVSPEPQDSAKLRQSGISSDVADVMY
VPANPTSSLTSGTSASQEGGKENEIGSKQIGEAPASGDSTDGTPRTPNTVFDFPAPPLDQ
LQEEEGEVERLPEHGTPKSFRKLDSIAFGESQSEDEHDNDLETDPPNWQQLVSREVLLGL
KPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSSSELRRIFSNLEEILQL
HIGLNEQMKAVRKRNETSVIDEIGEDLLIWFSGAGEEKLKHAAATFCSNQPFALEMIKSR
QKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTERPKEREKVK
KAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKMI
HEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIK
LNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKAVWQDLIGRMALTVKEQSTKP
ISLPGSPPCEGERDEEEASKLKEESHGVSTSSLQSPEKHMGAETPLISKPQSPSSVTSGK
SKISDLLAERQFEKEQAEETSKAPGMDYQSTIPEPHFPVSEERWALDALRNLGLLKQLLV
QQLGLIEKGTHEDWQHFLRFRTASQGVQVESPGAIQNVLDHSENSKTSQPGEGQMPLQTG
TGEIAACYSPRTSVESPVPQDYMELASQDSRASNVLVMDHMIMTPEPSSAELEGGPDDSG
EHFFDAREAHSDDNPSESDGTERKEEEALQLRISGNVLILDGFETVQESSTEEEVASGLP
SMGWAHQQQPLCDPRSDGGGSPFTSDFLVQQRWGPGEESGFSAQSPSSSADSHSQIMQYI
RKIEADLEHLKKVEESYMTLCQRLAGSALTEEHSDKS
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcacggacaggtttcccctcaaaaaacctataaggcat
gcaagtattttgacccgagagtctcctacagacaagaagcagaaagttgaacgcagtaca
tcacatgactttgaccccacagacagctcctccaagaagacaaagtctagttcagaggag
agtagatcggagacatatggtcttgttcagcgctgtgtgattatccagaaggatgacaat
ggatttgggctgacggtcagtggagacaatccagtcttcgtacagtctgttaaagaagat
ggagcagccatgcgggctggagtacaaacaggtgatcgaatcatcaaggtaaatggaact
ctagtgactcattcaaaccatttggaagtggtgaagcttatcaaatcgggttcctatgta
gctctcactgttcagggacgcccacctgggtcgccccagattccactagctgattctgaa
gtggagccaacagcctttggacatatgtctcccatcatgacatccccccattcacctgga
acatctggaaatacagagagaatcaccagcccagtgttgatgggggaagaaaataatgtg
gttcacaaccagaaagtagagattctgaggaagatgctgcagaaagagcaggaacggcta
cagttgttgcaagaagattacagccgcacacctgctcagcgattgcttaaggagatccag
gaggccaagaaacacatccctcagttgcaggagcagttatccaaagcaacaggctctgct
caggatggagctgtagttatatccagcaagacttctggtgactcccttctactcagtgaa
gtagaagcagacagtggtgatgggttgggcagaattgattatagcagcggagatggttct
cgacccaatagtgacattgcagacagtcccagaggtggcttgaaggaaaggatttatcta
gaagaaagcccggagaaaagtgagatggtaccagataatgacactcaatcaaacattggg
agtcccttaattcgaacagcacctcagatcattggagcagaggatgatgactttggcact
gaacatgaacagattaatggacagtgcagctgcttccaaagtattgaactgctgagatct
cgccctgctcacctagctgttttcttacaccacgtggtttcacagttcgaccctgcaaca
ttgctctgttatctttattcagacttgtacaaacagaccaattccaaggaaactcggcgc
gtcttccttgagtttcaccaattcttcctggaccgagccgcacacttgaaggtttctgtt
ccagatgaaatatctctagacttagaaaaaagaaggccagaacttatacctgaagatttg
caccgacattatgtccaaactatgcaagataaagtctatcctgaagttcagaagcacttg
gaagattttaggcagaaacgtagtatggggctaaccttagctgaaagtgaactgaccaaa
cttgatgcagatcgagaccgtgaccgggtaaccctggagaaagaacgggcatgtgcagag
cagatcattgccaaaattgaagaagttttgatgacagctcaagctgttgaagaagacaag
agttcaacaatgcaatatgtgatcctcatgtacatgaaacatttaggagtcagagtaaaa
gaacctcggaatttggagcataagcgaggtcgcattgggtttctgccaaaaatcaagcag
agtataaagaaagatagggaaggtgaagaaaaagtgaagagaagaggattcccaagcatt
ttaggacccccaaggaggccgagccgtcatgacaacagtgcaattggcagagccatggaa
ctacaaaaacagcgccatcccaagcacttacctacaccctcgtcagtgagtcctgaacct
caggactctgccaagttgcgccagagtgggatctccagtgatgtagcagatgttatgtat
gtgcctgctaatcccacatcttctttgacttcagggactagtgcctcccaagagggaggg
aaagagaatgaaatagggtcaaaacagattggagaagcaccagcttctggagattctaca
gatggtacaccacgaacccccaatacagtctttgatttcccagctccaccactggaccaa
ttgcaggaggaggaaggtgaagtagaaaggttacctgaacatggaacaccaaaatctttt
cgaaagcttgatagtatagcttttggggaaagtcagagtgaagatgaacatgacaatgac
ttagaaacagatccaccaaattggcagcagcttgttagcagagaggttctactagggcta
aaaccttgtgagatcaaacggcaggaagtgatcaatgagttgttctacactgagcgagct
catgtccgtacactgaaggttctagatcaggtgttctaccagcgagtgtcccgagagggg
attctgtcgtcatcagaactgagaagaatcttctccaacctggaagagattcttcagctt
cacattgggttgaatgaacaaatgaaggctgttcgaaagaggaatgagacttctgtaatt
gatgagatcggagaagatttattgatctggttcagtggagcaggagaggagaagttgaaa
catgcagctgctaccttctgtagtaaccagccttttgccctggaaatgatcaagtctcgt
cagaaaaaggactctcgattccagacttttgtgcaggatgctgagagtaatccactgtgc
cgtcgactgcagctaaaggatattattcctactcaaatgcagagactcactaaatatccc
cttctgttggataacattgctaagtacacagaacgtccaaaggaaagagaaaaggtgaag
aaagcagcagatcactgtcgtcaaatcctaaattatgtgaatcaagctgtcaaggaggca
gagaacaaacagcgcttagaagattatcagcgccgccttgatacatctaacttgaagctg
tcagagtatccaaatgttgaagagctcaggaatttggatttaacaaagaggaagatgatt
catgaaggaccattggtatggaaggtgaatagagataagactattgatctatacacattg
ctgctggaggacattcttgtattgttacaaaagcaggatgatagactggtgttgaggtgt
catagtaaaattctagcatctacagcagatagcaaacacacattcagccctgtaatcaaa
ctgaatactgtgttggttcgacaagttgcaacagataacaaagcattattcgtcatctct
atgtcagacaatggagcccaaatttatgaattggtggcacagacagtttctgaaaaggca
gtctggcaggacttgattggcaggatggccctaacagtaaaggaacagtcaacaaagccc
atctcattaccagggtcacccccttgcgaaggggagcgtgatgaagaagaggcttccaag
ttgaaggaggaatcacatggtgtttctacctctagtcttcaaagtccagaaaaacacatg
ggagcagagactcctttaatatcaaaacctcagtccccttcatcagttacctctgggaaa
tcaaagatcagtgatctactggctgaaagacagtttgaaaaggaacaagcagaagagaca
tctaaagcgcctggaatggactatcagagtactatcccagagccacatttccccgtctct
gaagagcggtgggcattggatgcactgaggaacttgggtctgttgaagcagttgctggta
cagcagctaggtttgattgagaaggggactcatgaagactggcaacatttcctcaggttt
aggacagcctctcagggggtacaggtagagagtccaggtgcaatccaaaatgtcctagac
cattctgaaaatagtaagaccagccagcctggtgaaggacagatgcctctccaaacagga
actggtgaaattgctgcatgttacagcccaaggacttcagttgaatccccagttccacag
gattatatggaactggcatctcaagatagcagggcaagtaatgttttagtcatggaccac
atgatcatgaccccagagccgtctagcgcagagctagaagggggtcctgatgacagcgga
gagcacttttttgatgcccgtgaagcccatagtgatgataatccttcagaaagtgatggg
acagaaaggaaggaagaggaagctcttcaattacggatctcaggaaatgttctgatcctc
gatggctttgaaacagtgcaggagagctctacagaggaggaagttgcttcaggcctccct
tctatggggtgggctcaccagcagcagcctctgtgtgatccccggtctgatggaggaggt
tctccattcacctctgatttcctagttcaacagcgctggggacctggggaggagtctggc
ttcagtgcccagagtccctcttcctctgcagactcacacagccaaatcatgcagtacatt
cggaagatagaggctgaccttgaacacttaaagaaggtggaggaaagttacatgactctt
tgccaaaggctggctggatcagccctcacagaggagcactcagataaaagttaa
DBGET
integrated database retrieval system
