KEGG   Trichosurus vulpecula (common brushtail): 118837966
Entry
118837966         CDS       T10126                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03010  Ribosome
tvp04120  Ubiquitin mediated proteolysis
tvp04137  Mitophagy - animal
tvp04140  Autophagy - animal
tvp05012  Parkinson disease
tvp05022  Pathways of neurodegeneration - multiple diseases
tvp05167  Kaposi sarcoma-associated herpesvirus infection
tvp05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    118837966
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118837966
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    118837966
   04137 Mitophagy - animal
    118837966
 09160 Human Diseases
  09172 Infectious disease: viral
   05171 Coronavirus disease - COVID-19
    118837966
   05167 Kaposi sarcoma-associated herpesvirus infection
    118837966
  09164 Neurodegenerative disease
   05012 Parkinson disease
    118837966
   05022 Pathways of neurodegeneration - multiple diseases
    118837966
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tvp03011]
    118837966
   04121 Ubiquitin system [BR:tvp04121]
    118837966
Ribosome [BR:tvp03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    118837966
  Archaea
    118837966
Ubiquitin system [BR:tvp04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   118837966
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 zf-C4pol OTU1_UBXL Dsc3_N UBL_UBAC1
Other DBs
NCBI-GeneID: 118837966
NCBI-ProteinID: XP_036601027
LinkDB
Position
2:225338239..225338797
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCSHTNN
LRPKKKVK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccctgacgggcaagaccatcacacttgaggtcgaaccaagt
gatactatcgagaatgtcaaagccaaaatccaggacaaggaaggtatcccaccagatcaa
caacgtctgatttttgctggaaaacagctagaagatggccgaactctttctgactacaac
atccagaaagagtccactctgcacttggtgctacgtcttcgagggggcatcattgagcct
tcccttcgccagctggcccagaagtacaactgtgacaagatgatctgccgcaagtgttat
gcccgcctgcacccccgcgctgtaaactgccgtaagaagaagtgcagccacaccaacaat
ctgcgccccaagaagaaggtcaaataa

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