Trichosurus vulpecula (common brushtail): 118838002
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Entry
118838002 CDS
T10126
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04360
Axon guidance
tvp04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
118838002 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
118838002 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvp04040
]
118838002 (TRPC4)
Ion channels [BR:
tvp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118838002 (TRPC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
118838002
NCBI-ProteinID:
XP_036601086
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All DBs
Position
2:complement(91388690..91570033)
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AA seq
975 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSAFNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGTNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLLKWIWTHLCKKNMRRKPESFGTIGRRTADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGSKLASLRSSKIIKEPPLETEERSD
SEGSDKTKKKNFSLFDITSMIHPRSAAIASERHSVSNGTALMVHETPREKQKKVNFVSDV
KHFGLFHKRSKPHSAEANANQIFSVSEEVSRQQADEELGKHFQLEARGLASKGEQSIPGL
SEQCVLADTKRRNRETLNLHFSDSLCTLESEKLVVEDTVPIIPKEMHAKEEASAKDCELK
ITETVIHEDYVTTRL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattataaaaggaatgtcaatgctccctacagagatcgcatccctctt
cggattgtaagagcagaatctgaactctcaccatcagagaaagcctatttgaatgctgtg
gagaagggagattatgccagtgtcaagaaatccctggaggaggcagaaatttattttaaa
attaatattaactgcatcgatccccttggaagaactgctctcctcattgcgatcgaaaac
gagaacctagaacttattgaattgctcttaagttttaatgtgtatgttggagatgccctt
ctacatgccataagaaaggaagtcgtgggggctgtggagctgctattaaaccacaagaaa
cctagtggagagaaacaggtccctccaatactccttgataaacagttctctgaattcaca
ccagatatcacaccaatcattttggcagctcatacaaataattatgagataataaaactt
ttagttcagaaaggtgtttctgtacctaggccccatgaggttcgctgtaattgtgttgaa
tgtgtctccagttcagatgtagacagcctccgtcattctcgttccagactcaatatctat
aaagccttggcaagcccatctctgattgcattgtcaagtgaggatccatttctcacagct
tttcaactgagttgggagctgcaagaactgagcaaagtggaaaatgaatttaaatctgaa
tatgaagaactatcccggcagtgcaaacaatttgctaaggaccttttggaccagacaagg
agttccagggagttggaaatcatcctgaattatcgagatgataacagcttgatagaagaa
caaagtggcaatgaccttgcaagactcaagttggctattaagtaccgacaaaaagagttt
gttgcccaaccgaactgtcagcagctccttgcatctcgttggtatgatgagttcccaggc
tggaggagaagacactgggcagtgaagatgttgacatgcttcatcataggacttcttttc
cctgtcttctctgtgtgctacctgatagcccccaaaagcccccttggactcttcatcaga
aaaccatttatcaagtttatctgccacactgcatcctatttgacttttttgttcctgctg
ctgcttgcctctcaacatattgacaggtcagacttgaacaggcaggggccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggtgaaattaaacag
atgtgggatggtggacttcaagattacatccatgactggtggaatctaatggactttgta
atgaattccttatacttggcaacaatctctttgaaaatcgttgcatttgtaaagtatagt
gcatttaacccccgagaatcttgggatatgtggcaccccactttggtggcagaggcttta
tttgctattgcaaacatcttcagttctctgcgtctgatctcactgtttactgccaattct
cacctgggacctctgcagatctctctcggaagaatgctgctagacatcttgaagtttttg
ttcatttactgtcttgtattgctagcttttgcaaacggcttgaatcagttgtacttttat
tacgaagaaacaaaaggaacaaattgcaaaggaatacggtgtgagaaacagaacaatgcc
ttttccacgttatttgagacacttcagtctctattttggtctatatttgggctcattaat
ctgtatgtgaccaatgtcaaagcacagcatgaatttacagaatttgttggggccaccatg
tttggaacatacaatgtcatctctctagttgttctactcaacatgcttatcgctatgatg
aataattcttaccaactcattgctgatcatgcagacattgaatggaaatttgcacggacc
aagttatggatgagttattttgaagaaggaggtactctgcctactcccttcaatgtcatc
ccaagccccaaatctctctggtatcttctcaaatggatttggacgcacctgtgcaagaaa
aacatgagacgaaaaccagaaagttttggaacaatagggagacggacagctgataatttg
agaagacatcatcagtaccaggaagtcatgaggaacttggtgaagagatatgttgcagcg
atgattagagatgctaaaactgaagaaggccttactgaggaaaactttaaggagctaaaa
caagacatttccagcttccgttttgaagtcctaggattgctgaaaggaagcaagcttgct
tctttacgatcttcaaaaattataaaggagcctccattggagactgaggagaggagtgac
agtgaagggagtgacaagacaaagaaaaagaatttcagcctctttgatataaccagcatg
attcatccaaggtcagcagccatcgcttcagaaagacacagcgtgagcaatggcactgcc
ctgatggttcatgaaacccccagagagaagcagaagaaagtgaattttgtatccgacgtc
aaacactttgggctgtttcataagcgttccaaaccacactctgctgaggcaaacgccaac
cagatcttctcggtttcagaggaagtttcacgtcaacaggcagatgaagaacttgggaaa
cattttcaactggaagcaagaggactggccagcaaaggtgaacagagcatcccaggcctc
agtgagcagtgtgtgttagcagacacgaaaagaaggaacagagagactttgaatttacat
ttcagtgacagcctttgcaccttggaatcagagaagttagtggtagaggacactgtgccc
ataataccaaaggagatgcatgccaaggaagaggccagtgctaaagactgtgagttaaaa
atcacagagacagtgatacacgaagactatgtaacaacgagattgtga
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