KEGG   Trichosurus vulpecula (common brushtail): 118838189
Entry
118838189         CDS       T10126                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118838189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvp03019]
    118838189
   03036 Chromosome and associated proteins [BR:tvp03036]
    118838189
Messenger RNA biogenesis [BR:tvp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     118838189
Chromosome and associated proteins [BR:tvp03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     118838189
    COMPASS/SET1 complex (yeast)
     118838189
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st DSE1_N Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_TEP1_C PAC11 Beta-prop_IFT140_1st Beta-prop_SCAP ASA1 WDR90_beta-prop_4th TRM82_WD Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_NWD2_C Beta-prop_SPT8 WD40_RFWD3 DCX Beta-prop_DCAF4 Beta-prop_HPS5 VID27
Other DBs
NCBI-GeneID: 118838189
NCBI-ProteinID: XP_036601312
LinkDB
Position
1:342409867..342411326
AA seq 447 aa
MHVLDGSTAPPTSGLASTKSPEVYQRGVRGIEQLNNPAEREGSVRSGEDSNSREEPLLFT
SLAVALARFASPVTPEGRKSAQAIFYLEVFDQSKPRYHPSPRRQPLSTSQRLLMAETPEK
GTSAPAAFCRELRFSSTFPKLTEEQLQNFRVSKICHRNKDKLISLDFSNDGEHVVACCAD
NTLLIYNCQQGMATGELSLSQYGGDIIRWGHDSDTVIHSSKIFDYNICYLALQEAKYITL
LKGHQQKVLSLSLSSQNYLISGSLDQSIRLWDLRFSDCINIKSFQGETVCTFHPEGTLIA
TGIGSKKVVFHDIRFASRPLNTFWIGRYGNWGGLKFSNDGKLLLISTNSSCSYLTDPEQQ
TVFHTFEGYDNTNAFPLEASFTPDSEFIIIGSEDGKVHIWNAESGRKVVVLNEEKVDSIT
CLQFNPKLMSFVSANTNMAFWEPRIDN
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgcacgtgttggacggttctactgccccgcctacctctgggctagcctctacaaaaagc
ccagaggtttaccagagaggtgtaagggggattgagcagctgaacaacccagctgagaga
gaaggaagtgtccgcagtggtgaggacagtaacagcagggaggaaccgctgctttttacc
agtctagcagttgccttggccagattcgcaagtccggtaactccggagggaagaaaatca
gcccaggccatcttctacctcgaggtcttcgaccagtccaagccgcgctaccatccatct
cccagacgccagcctctgtctactagccagcggcttctaatggctgaaactccagagaaa
ggcacatcagctcctgcagcgttttgccgagagcttcgtttctcctcaacgttcccaaag
ctgactgaggagcagctgcagaatttcagagtgtccaagatctgccacaggaacaaggac
aaattaatctctctagattttagcaacgatggtgagcatgtcgttgcgtgctgcgcggat
aacacactccttatatataactgccaacagggcatggccacaggagaactgtccctcagc
caatacggaggggacatcatcagatgggggcatgactcagacactgtaatacacagctcc
aaaatttttgactataacatctgttacttggctttgcaggaggctaaatacatcacactt
ttaaagggacatcaacagaaagtgctatccttgtccttgtcatcacaaaactacctaatc
tcaggatctctagatcaaagcattagactttgggatttgaggttttctgactgcataaac
attaagtctttccagggggagacagtttgtacttttcacccagaagggacactgattgct
actggcatcggctctaaaaaggttgtgtttcatgatattcgttttgccagtaggccattg
aacaccttctggattggacgttatggtaattggggaggcctgaaattcagcaacgatggc
aaattgctccttatatctaccaatagcagttgtagctacttaactgacccagagcaacag
actgtcttccatacgtttgaaggttatgataacaccaatgccttcccactagaagcctct
ttcactccagattctgagtttattattattggctctgaggacggcaaagtgcacatctgg
aatgcagaaagtggtaggaaagtagttgtgttaaatgaggaaaaagttgattctattacc
tgtttgcaattcaatcccaaattaatgtcctttgttagtgcaaataccaacatggcattc
tgggaaccaagaatcgataactaa

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