Trichosurus vulpecula (common brushtail): 118838332
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Entry
118838332 CDS
T10126
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvp03041
]
118838332 (DDX18)
03009 Ribosome biogenesis [BR:
tvp03009
]
118838332 (DDX18)
Enzymes [BR:
tvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118838332 (DDX18)
Spliceosome [BR:
tvp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118838332 (DDX18)
Ribosome biogenesis [BR:
tvp03009
]
Eukaryotic type
90S particles
Helicases
118838332 (DDX18)
Pre-60S particles
118838332 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
118838332
NCBI-ProteinID:
XP_036601480
LinkDB
All DBs
Position
2:299036146..299062623
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AA seq
642 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNEKLRQRNQRLKQKEALRANIPEAQDEHVSEETVEEIKVEKSPK
KSTVLAASEESTAQLPNSELKKKKKKKKRKITADAGPENKKAKTEDQEESDDESEKDPKI
KENTMEDQNEDAEMPSLPLGLTGSFEDTSFTSLSNIVNENTLKAIAEMGFTNMTEIQHKS
IRPLLEGRDILAAAKTGSGKTLAFLIPSIELIVKLKFMPRNGTGVLILSPTRELAMQTFG
VLKELMSHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGRLLDHMQNTPGFMFKNLQC
LVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKEPLYVGVD
DDKDTATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYID
LPVMAIHGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEY
IHRVGRTARGINGRGHALLILRPEELGFLRYLKQAKVPLSEFEFSWSKISDIQSQLEKLI
EKNYFLHKSAQEAYKSYVRAYDSHSLKQIYNVNSLNLPQVALSFGFKVPPFVDLNVNSSQ
GKRLQKRGGGGGFGYQKPKNVHKSKIFKHISKKKSDGRQFSH
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaccttccgatgaagttgctgcgcaagaagatcgagaagcgcaatgagaagctg
cgtcagaggaaccagcggctgaagcagaaagaggccttgagggccaatataccagaagcc
caagatgagcatgtatcagaagaaacagtagaagaaataaaagtggaaaaatctcccaag
aaatctacagtattagcagccagtgaagaatcaactgcacagctccccaattctgaatta
aaaaagaaaaagaagaagaagaaaaggaagataacagctgatgcaggacctgaaaacaaa
aaagcaaaaactgaagaccaagaggaatctgatgatgaaagtgagaaagatcccaaaata
aaagaaaatactatggaggatcagaatgaggatgctgaaatgcccagcctccctcttgga
ctaacagggtcctttgaggatacttcattcacttcacttagtaatatcgtcaatgaaaac
actctgaaagcaatagcagaaatgggctttactaacatgactgagattcagcataaaagt
atcagaccacttctagagggcagggatattctagcagctgcaaaaacaggcagtggcaaa
accctagcattcctcatcccttcgatagaactcattgtcaagttaaagttcatgcctaga
aatggaacaggagtccttatcctctcacctactcgggagctggctatgcagacctttggt
gttcttaaggaactaatgtctcaccacgtgcatacttacggtttgatcatgggaggcagt
aacagatctgcagaggcacagaaacttgcaaatgggatcaacattattgtggcaacacct
ggccgacttctggaccatatgcagaacaccccaggatttatgtttaaaaacctgcagtgt
cttgttatcgatgaggctgaccgaattcttgaagttgggtttgaggaagagatgaaacag
atcatcaaacttctgccaaaacgcagacaaacaatgctcttttctgccacacaaactcga
aaggtagaagatctggcaaagatttcccttaagaaggagccattgtatgttggtgttgat
gatgataaagatactgcaacagtggatggtcttgaacagggatatgttgtttgtccatct
gaaaaaaggttccttctactctttacattcctcaagaagaaccggaagaagaagctgatg
gtatttttttcttcatgtatgtcagtgaaataccactatgagcttctgaactacattgat
ttacctgtcatggccattcatggcaaacagaagcaaaataagcggacaactaccttcttt
cagttctgcaatgcagattctggaattttgctgtgtacagatgtggctgccagagggcta
gatatcccagaagtagattggattgtccagtatgaccccccggatgatccaaaggaatat
attcatcgtgttggtagaacagccagaggcataaacggaagaggtcatgctctgcttatt
ttacgaccagaagaattgggttttcttcgttacctgaagcaagccaaggtaccattaagt
gaatttgaattttcctggtcaaaaatttctgacattcagtctcagttggaaaaactaatt
gagaagaactacttccttcataaatcagcccaggaggcatataaatcctacgttcgagcc
tatgattcccattctctgaagcaaatctacaatgttaacagcttgaatttacctcaagtt
gctttatcatttggtttcaaagtacctccatttgttgacctaaatgtgaacagcagccaa
gggaagaggttgcaaaaaagaggtggtggcggtggttttggctaccagaagcccaagaat
gtccacaagtccaaaatcttcaagcacattagcaagaagaaatctgatggcaggcagttc
tctcactga
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