Trichosurus vulpecula (common brushtail): 118838333
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Entry
118838333 CDS
T10126
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
118838333 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvp03000
]
118838333 (CIC)
Transcription factors [BR:
tvp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118838333 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
118838333
NCBI-ProteinID:
XP_036601481
LinkDB
All DBs
Position
2:complement(41372644..41383480)
Genome browser
AA seq
1602 aa
AA seq
DB search
MYSAPRPLPAPGAAAPRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQ
PASHPVSSSQSKEPAESAAVAHEQSPSGTGGPESGRPPGATCPESPAPGPPQAPGASEGS
KVPPQHSEEEGPGPTGESRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKE
RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA
LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSDAKPVALGLTGGPKEMRERSM
SETGTAAAPGVSSELLSAAAQTLLGTEVKTPASGPGTAERLHPAGPGPTRPRAFSHSGVH
GLDGGEADSQALQELTQMVSGPAPYTGPKPPPQYGGPGPFATPSEGGTLAGGRPPMLPAR
PSRSQRTASEDMTSDEERMVICEEEGDDDVIADDSFGTTDIDLKCKERVTDSDTEDSSGE
DPEGAKGFGRKLFSPVIRSSSLSAAFTHCRPALESEPPGAPDPSAFPKGYGPAPTSSSSS
SSFQSAPREPGRGAAGGPLRAQHPAGGGPLPPKARFPPVDPNAYRRKRPESTAGPEPFPG
PSVIASPPGGGVLQALVLPSGGSLYPAKEPPERDSSVARLPSATVLVTAPTSLGSGGLTY
GAPPAPPRPAPTVVTNVVRPVSSTPVPIASKPFPGVGRGEGSPAEGGAKGEAGAGPRAPG
GSPLGIGLVYTDKKQAAPTAPHLVAGPLLGVGKAPAAVTNLLVGAPGYGTSAPPAVQFIA
QGPPGGGGAAAAAGPPTGSGPNGPVPLGILQPAPLGKPGGITQVQYILPTLPQQLQVAPA
PAAPGPKAAAVGGSGPTASIRFALPPGTTTNGKVLAPATPAPGIPILQPVPSPAPPKAQS
VSPVQAQPSAGPTQLLPGKVLVPLAAPSVAVRGGGASQPLPLVSPPFSVPVQNGAQPSSK
IIQLTPVPVTTPGNLVPPLSPATLPSPASQSQKVILPSSTRITYVQSAAGHALPLGPSPS
SSQSGAPGTPASYGPASSVALGFTTIGPSGPAIVQPLISGQAPLLAPGQVGVSPVPSPQL
PPACAGGPVITAFYPGGPGGPSAMPLPQPAPPTPAPPGLVYTVATSAAPPAAILPKGGAP
GPPAPTASQTPTSPFPSATGSVAYSLVTPKAQRPPPKPPQKVKAAIASIPVGSYESGVPT
RPGPVPRQAAEQGAPREVAPETEADGGPATPAPPPPPDNWAPPGRESARSSPPPAPPAED
RPGVKASETASKIPSSPDWRIPALALESRGEPPAPPSPAPAPGGSEGASGRPPGAGDTPE
RKEAPSKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPTLQSLATS
PRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFDRT
GTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADIFP
SKVCLQLKIREVRQKIMQAATPTEQPPGGEAPGPGPPPASAGAAPPPPSEGPDSPPPAPD
SSSSSVPSAAPPQPSEPAPGESSWDGASQPSPPPPGPSPGGR
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggccccccggccgctgcccgcgcccggcgccgccgccccccgcggcctcggc
atgttcgtgtggacaaatgtggagccacgatcagtggccgtatttccctggcactcgctt
gtcccgttcttggcacccagccagcctgacccttctgttcagcccagtgaggcccagcag
ccagccagccaccctgtctcctctagccagagcaaagagcctgccgagtcagcagcagta
gcccatgagcagtcccccagtgggacagggggcccagaatctggacggccacctggggcc
acctgtcctgagagcccagctcccgggcctccacaggcccctggggcctccgaaggcagc
aaggttccacctcagcattctgaggaggaaggccctggccctacaggggagagtcggctg
gacagcgagacagagagtgaccacgatgatgcgttcctctctatcatgtctccggagatc
cagttgccactaccaccaggaaagcgccggacgcagtccctcagcgccttgcccaaggaa
agagattcctcttctgagaaggacgggcgcagccccaacaagagggagaaggatcacatc
cgacgccccatgaacgccttcatgatattcagcaagagacaccgggccctggtgcaccag
cgccacccgaaccaggataaccggactgtcagcaaaatcctgggcgagtggtggtatgca
ctggggcccaaggagaagcagaagtaccacgatctggccttccaggtgaaggaggcccac
ttcaaggcccacccagactggaaatggtgcaacaaggaccggaagaaatcgagctcagat
gccaagcccgtggccctgggtctgacaggaggccccaaggagatgcgggagcgcagcatg
tcagagaccggcacagcagctgctcctggagtctcatcagaattactgtcagcagcagcc
caaaccctgctgggcacagaggtcaagacccctgcatctggccctgggacggcagaacgg
ctccacccagcagggcctggccccaccaggccgagagctttctcccacagtggtgtgcat
ggcttagatgggggtgaagcagacagccaggcgctgcaggaactcacccagatggtgtca
gggccagctccctacacggggccgaagcctccgcctcagtatgggggcccaggacccttt
gccactcccagtgagggtggaaccttggcaggtgggcggcccccaatgctgccagcaaga
ccatcccgctcccagcgcacagctagcgaagacatgaccagtgacgaggagcggatggtc
atttgtgaagaggagggagatgatgatgttatagcggatgacagctttggcaccactgac
atcgacttaaagtgcaaggagcgggtgacggacagtgacaccgaggacagttctggggag
gacccagagggggccaagggatttggcaggaagttgttctcacctgtgatccgttcatcc
tctctatctgctgccttcacacactgccgcccagcactggagtccgaaccccctggagcc
cctgacccttccgcttttcccaagggctatggccctgcacccacctcctcctcttcttcc
tcctccttccagtcggctccccgggagcctggtcgaggtgcagctggagggcctctgcgt
gcccagcacccggctgggggaggcccgctgcctcctaaagcccgatttcctcctgtggac
ccaaatgcctatcggcgcaagcggccagagagcacagcagggccagagcccttccccggc
ccctcagtcattgcctcgccccccggaggaggtgtcctacaggccttggtgctgccctcc
gggggcagcctgtacccggccaaggaacccccagagcgggacagcagtgtggcccgactg
ccatcagccacagtgttggtgacagcccctacctccctagggagtggagggctcacctat
ggagccccaccggctcccccacgtcccgctccaactgtggtgaccaatgtggtacggcca
gtcagcagtacacctgtgcccattgcttctaaacccttccctggagtgggacgaggtgag
gggtcaccagctgaaggaggcgccaaaggggaggcgggggctggtccccgagcaccaggg
ggctccccactcggtattggtctggtctacactgataaaaaacaagcagcccctacagcc
ccgcatctggtggcaggaccccttctgggagtgggcaaggcccctgctgctgtgactaac
cttctcgtgggcgccccaggctatggcacctctgcccctccagccgtgcagttcattgcc
caaggcccacctggtggaggcggggcagcggctgcagcagggccccccactggcagtggc
cccaacggccccgtgcccctgggcatcctgcagcccgcccctctaggcaagcctgggggc
atcactcaggtgcagtatatcctgcccacgctgccccagcagctgcaagtggccccagcc
ccagcagcgcctggccccaaagccgcagctgtcgggggctcaggccctacggccagcatc
cgctttgccctgccaccaggaactaccaccaatgggaaggtcctggcaccagccacccca
gcccctgggattcccattctgcagccagtgccctctcctgcacccccgaaagcccagtcg
gtgtctccagtgcaggcccagccctcagcaggccccacccagctgctgcctgggaaggtc
ctggtgcccctggcagcacctagtgtggcagtacggggtgggggggccagccagcctcta
cctttggtgagcccacccttctctgttccagtgcagaatggagcccagccatcgagcaaa
atcatccagctcaccccagtgccagtgaccacccctggtaatctggtacccccactcagc
ccggccacgctgcccagtcctgcatcccagtctcagaaggtcattttgccctcttccacc
agaataacttacgtacagtcggctgctgggcatgcccttcccctgggccccagcccttct
tccagccagagtggagcccctggcaccccagcctcttatgggccggccagctccgtggcg
ctgggcttcaccaccatcgggcccagtggccctgccatagtccagcccctgatctcaggc
caagccccgctgctggccccaggccaggttggcgtatcaccagtccccagtcctcagctg
ccaccagcctgtgctgggggtcctgtcatcacagcattctaccctggcgggccagggggc
ccctcagccatgcccctccctcagccagccccaccaaccccagcccctcctggtctcgtc
tatactgtggccaccagcgctgccccacctgctgccatcctgcctaagggcggggcacct
ggtcctccagcccccactgcctctcagacccctaccagtcctttccccagtgccacaggc
tccgtggcctatagcttggtgaccccaaaagcccagcgtccaccacccaagcccccacag
aaagtgaaggcggccattgccagcatccccgtgggctcctatgagtctggcgtccccacc
cggccaggccctgtcccccggcaggctgcagagcagggcgcccccagggaggtggccccg
gagacagaagctgatggtgggccagccacgcccgcacccccacctccaccagataattgg
gctccacctggccgagagagcgcccgcagcagccctccccctgccccgccagcagaggat
cggccaggagtcaaggcatcagagacggccagcaagattcccagttcccctgattggcgg
attccagctctggcactggagagccgtggggagcccccggctccgcccagcccagctccc
gcccctgggggcagtgaaggggcaagtgggcggcctccaggggctggggacaccccggag
cggaaggaagcccccagcaagaaggtcaaggttcggccccctcccctgaagaagactttt
gactcggtggacaacagggtcctctctgaggtggactttgaggagcgctttgcagagctg
cctgaattccggccagaggaggtgctgccctcacccaccctgcagtcgctggccacctcc
ccccgagccatcctgggctcctaccggaagaaaagaaagaactcaactgacctggactca
gccccagaggaccccacctcccccaagcgcaaaatgaggcgtcgttcgagctgcagctct
gagcccaacacgccgaagagcgccaagtgtgagggcgacatcttcacctttgaccggact
ggcactgaggcagaggatgtgctgggggagctggagtacgagaaggtgccctactcgtct
ctgcgccgcaccctggaccagcggcgggcactggtcatgcagctcttccaggaccatggc
ttcttcccctcagcccaggctacggcggcgttccaggcccgctacgcagacatctttccc
tccaaagtgtgtctccagctcaagatccgagaggtcagacagaagattatgcaggcagcc
acacccacagaacagccccctggtggggaggcccctggacctgggcctccaccagctagc
gcaggggctgctcctccgcccccctctgagggccctgactcgcccccacctgctccggac
tcttcctcatcctccgtcccctcagctgcccctccccagccctcggagcctgcgcccggt
gaatcgagctgggatggggccagccagccttcccctccaccccctggcccttccccaggg
ggcaggtga
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integrated database retrieval system
