Trichosurus vulpecula (common brushtail): 118838359
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Entry
118838359 CDS
T10126
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118838359 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvp04121
]
118838359 (MID1)
Enzymes [BR:
tvp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118838359 (MID1)
Ubiquitin system [BR:
tvp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118838359 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
118838359
NCBI-ProteinID:
XP_036601525
LinkDB
All DBs
Position
2:complement(413773136..413928829)
Genome browser
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNAMTSSEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDLLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNSPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRNSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWVLCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSLHLYTFDITFAQPVCPTFTVWNKCLTIITGLPIPDHL
DCLEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacattggagtcggaactgacctgccctatctgtctggagctgtttgaagacccg
ctactgctgccctgtgcccatagcctctgtttcaactgtgcacatcgcatcttagtctcc
cactgcgccaccaacgaatccgtggaatccatcactgccttccagtgccctacttgtcgt
tatgtcatcaccctcagccagagaggtctagagggactcaagcgtaacgtcaccctgcaa
aacattatcgacaggtttcagaaggcttccgtgagtgggcccaactctcccagtgagacc
cgccgagagcgggccttcgatagcaacgccatgacctccagcgagaaggtcctctgtcag
ttctgtgaccaggaccctgcccaggatgctgtgaaaacctgtgtcacttgtgaagtgtcc
tactgtgaggagtgtctgaaagcaactcacccgaataagaagcccttcacgggccaccgt
ctcattgagccaattccggactctcacattagaggattgatgtgcctagagcatgaggat
gagaaggtgaatatgtactgtgtgacagatgaccagctaatctgtgccttatgtaaactg
gttgggcgacaccgggatcatcaggtggcagctttgagtgagcgctatgacaagttgaag
caaaacttagagagtaacctcaccaaccttattaagaggaatactgaactggaaacactt
ttggctaagctcattcaaacttgtcagcatgttgaggtcaatgcgtcacgacaagaaacc
aaactgatggaggaatgtgacctactcattgaaatcatccaacagagacgccaaattatt
ggaaccaaaatcaaagaagggaaggtggtgagacttcgaaaactggcccagcagattgca
aactgcaaacagtgcattgaacgatctacatccctcatctcccaagctgaacagtcgctg
aaggagaatgatcatgcccgattcttacagacagctaaaaatatcactgaaagggtctcc
atggcaactgcatcctcccaggttctaattcctgaaattaacctcaatgacacttttgat
accttcgcattagatttttccagagagaagaaattactagaatgtctggattaccttaca
gctcccaactctccaacaattagagaagagctctgtacagcctcatacgacaccatcact
gtgcactggacctccgatgatgaatttagtgtggtttcatatgagcttcagtataccatc
tttactggacaagctaacgttgttagtttgtgtaactccgccgacagctggatgattgtg
cccaacatcaaacaaaaccactacacagttcacgggctccagagcggcaccaagtacatc
ttcatcgtcaaagctattaatcaggctggcagtcggaacagcgagcccggcaaactgaag
acaaacagccagccatttaaattggaccccaaatctgcccaccgaaaactaaaggtgtcc
catgacaacttgacagtagaacgtgatgaaacatcatcaaaaaagagtcacacacctgag
cgcttcaccagccaagggagctatggcgtagcaggcaatgtgttcatcgacagtgggcgc
cattactgggaggtagtcataagtggaagcacatggtatgcaattggtcttgcttacaaa
tcagccccaaagcatgagtggattggaaagaattctgcttcttgggtgctctgccgttgc
aataataattgggtggtgagacataatagcaaggaaattcccatcgaaccagcaccccac
ctccggcgcgtgggcattctgctagactatgataatggctccatcgccttttatgatgct
ttgaactcccttcatctttatacatttgatatcacatttgcacagccggtgtgtcctacc
ttcactgtgtggaataaatgtttgacaattataacaggccttcccatcccagatcacttg
gactgccttgagcagctgccctga
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