Trichosurus vulpecula (common brushtail): 118840324
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Entry
118840324 CDS
T10126
Name
(RefSeq) dynein intermediate chain 1, axonemal-like
KO
K10409
dynein axonemal intermediate chain 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04814
Motor proteins
tvp05014
Amyotrophic lateral sclerosis
tvp05016
Huntington disease
tvp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118840324
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118840324
05016 Huntington disease
118840324
05022 Pathways of neurodegeneration - multiple diseases
118840324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tvp03037
]
118840324
04812 Cytoskeleton proteins [BR:
tvp04812
]
118840324
Cilium and associated proteins [BR:
tvp03037
]
Motile cilia and associated proteins
Dynein arm
118840324
Cytoskeleton proteins [BR:
tvp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
118840324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_WDR19_1st
EIF3I
WDR55
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_RFWD3
DUF4191
Beta-prop_RSE1_2nd
Beta-prop_LRRK2
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
118840324
NCBI-ProteinID:
XP_036603700
LinkDB
All DBs
Position
2:complement(418973224..418976383)
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AA seq
714 aa
AA seq
DB search
MAPKPAARRSSGGGQPVSRITRKRDEDAGPDVGEGADEWAQAKTLIKPPDQLELSEAELK
EEFTRILTSNNPHAPQNIVRFSFKEGTYKPVSFIAQLAVHFSLTGNMIPKDSDEGRRQNY
VAGSIQEVEEAQPAEAEGGGEGEEGEEGEEGGEGGEGGEGGEGGEPKEAGSQGEVQAAEE
AAEGEAEAEIEEVITPRKPKERKLTNQFNFSERASQTFNNPLRDRDCQMEPPPRANFSAT
ATQWEIYDAYSEELEKQEKTKELEKAKGPVAKKVEKKTTGKLTSLDLLSDDITKVTQAAK
IVERMVNQNTYDDIAQDFKYYEDAADEYREQEGTLLPLWKFQYDKAKRLAVTALSWNPKY
NDLFAVGHGSYDFMKQNRGMLLLYTLKNPSFPEYIFSSECGIMCLDMHVEHPYLVAVGYY
DGNVAIYNLKKPHSQPSYKSSAKLGKHSEPVWQVRWQNDDMDNNLNFFSVSSDGRIVSWT
LVKNELMHTDIITLNVEGTTTEGPEELNVYTIGCGTSFDFHKQIDYLFLVGTEEGKIYKC
SKTYSNEFIDVFEAHNMTVDAVIWNPYHSKVFMSCSSDWTVKIWDHTIKKPVFIYDLNSA
VGDIAWAPYSSTVFAAVTADGKAHVFDLVINKYEALCNQPVVAKKKSKLTHVRFNAVHPV
IIVGDDHGQVTCLKLSPNLRKMPKKKKGQEVKRGPEVEIAKLDKLLNLVKEAKS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggccccgaaacctgcggcccgtagatcgagtggcggtggacaaccagtttccaggata
accaggaaaagagatgaggacgctggcccagatgtgggagaaggggcagatgagtgggct
caggccaagacgctgatcaaacccccagaccagttggagctgagtgaagctgagttaaaa
gaagaattcactcgtatcctgacgtccaataacccacacgctccccaaaacatcgtcagg
ttcagctttaaagaagggacgtataaacctgtaagttttatagcccaactagcagtccac
ttcagcttgactgggaacatgatccccaaagactcagatgaaggcagacggcagaattat
gtagcaggaagtattcaggaggttgaggaggctcaacccgcagaagcagaaggtggtggt
gaaggtgaagaaggtgaagaaggtgaagaaggtggagaaggtggagaaggcggtgaaggc
ggtgaaggtggagaaccgaaggaagcagggagtcaaggggaggttcaggcggctgaagaa
gcggcagaaggggaagcagaagccgaaatagaagaggttattacccctagaaagccaaag
gaacggaagctcaccaaccagtttaattttagtgaaagagcatctcagacgttcaacaac
cctttacgggaccgagactgtcaaatggaacctccgcctagagcaaacttctctgccaca
gctactcagtgggagatctatgatgcatattcggaagaactggagaaacaagaaaagact
aaggagttggagaaggcaaaaggcccagtagctaaaaaagttgagaagaagacaacgggg
aaattgacatccctggatttgctgagtgacgacataaccaaggtgacccaagcagccaaa
atagtggagcgaatggtcaatcagaacacatacgatgatattgcccaagattttaagtat
tatgaagatgccgctgatgagtatcgggaacaggagggcaccttgcttcctctctggaag
ttccagtatgataaggcaaagcgcctggctgtgactgccctcagctggaatccaaaatat
aatgatctgtttgcagtgggacatggctcttatgacttcatgaagcaaaaccggggcatg
ctgctcctgtacaccctgaagaaccccagcttcccagaatatatcttcagcagcgagtgt
ggcatcatgtgccttgacatgcatgtcgagcacccctacctggtggccgtaggctactat
gatggcaacgtggctatctacaatctgaagaagcctcattcacagccatcctacaagagc
tcagccaagttaggaaagcactcagaacctgtgtggcaggtcaggtggcagaatgatgac
atggacaataatctgaatttcttctcagtgtcatctgatgggcggattgtatcctggact
ctggtgaagaatgagctgatgcacacagatatcatcactctaaatgtggagggcaccaca
actgaaggtccagaagaacttaacgtgtacacaattggttgtggaacatccttcgacttc
cacaaacagatcgactacttgtttcttgtgggcacggaggagggtaaaatctacaaatgc
tccaaaacctactcaaatgaattcattgacgtgtttgaggcccacaacatgacagtggat
gcagtgatctggaatccataccattccaaagtcttcatgtcctgcagctctgactggaca
gtgaaaatctgggaccacacaatcaagaaaccagtgttcatctatgacttgaattctgct
gtgggtgatatagcttgggccccatactcctctactgtctttgctgcagtcaccgctgat
gggaaggcccatgtgtttgacctggtcatcaacaaatatgaggctctctgcaaccagcca
gtagtggccaagaagaaaagtaagcttacccatgtgcggttcaatgccgttcaccctgtc
attattgttggggatgatcatggtcaggtcacctgcctcaaactctcacccaatctgcgc
aagatgcccaagaagaagaaggggcaggaggtgaagagaggcccagaagtagagattgcc
aaactggacaaactgttgaacctcgtgaaagaagcgaagagctga
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