Trichosurus vulpecula (common brushtail): 118840682
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Entry
118840682 CDS
T10126
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03040
Spliceosome
tvp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118840682
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118840682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118840682
03041 Spliceosome [BR:
tvp03041
]
118840682
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118840682
mRNA cycle factors
Common to processing body (P body) and stress granule
118840682
Spliceosome [BR:
tvp03041
]
Common components
Common spliceosomal components
hnRNP proteins
118840682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
118840682
NCBI-ProteinID:
XP_036603916
LinkDB
All DBs
Position
3:252162582..252163817
Genome browser
AA seq
319 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQDMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGQYFAKPRN
QGGYGGSSSSSSYGSGRRF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtcagagtcccccaaggagcccgagcagcttcggaagctgtttatcggaggc
ctgagtttcgagacgacggacgagagcctaaggagccattttgagcaatggggcacgctt
acagactgcgtggtgatgagggatccaaataccaaacgttccaggggctttggttttgtt
acctatgccacagtggaagaggtagatgcagccatgaatgcaagacctcacaaagttgat
ggcagagttgttgaaccaaagagagctgtttccagagaggactctcaaaggccaggcgcc
cacttaactgtgaaaaagatctttgtgggtggcattaaggaagacactgaggagcatcac
ttaagagactattttgaacaatatggaaaaattgaagtgattgaaatcatgactgaccga
ggcagtggcaaaaagagaggctttgcttttgttacttttgatgaccatgattctgtggat
aagattgtcattcaaaaataccatactgtgaatggccacaactgtgaagtaaggaaagct
ttgtctaagcaagatatggccagtgcttcatctagtcaaagaggtcgaagtggttctgga
aactttggtggtggccgtggaggtggctttggtggaaatgataactttggccgtggtggg
aacttcagtggtcgtggtggttttggtggcagtcgtggtggtggaggatatggtggaagt
ggagatggctacaatggatttggaaatgatggaagcaactttggaggtggtggaagctac
aatgattttggcaactacaacaatcagtcttcaaactttggtcccatgaagggaggaaac
ttcggaggcaggagctcaggcccttatggtgggggccaatattttgccaaaccacgtaac
caaggtggctatggcggttccagtagtagcagtagttacggcagtggcagaagattttaa
DBGET
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