Trichosurus vulpecula (common brushtail): 118840725
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Entry
118840725 CDS
T10126
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvp03041
]
118840725
Enzymes [BR:
tvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118840725
Spliceosome [BR:
tvp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118840725
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
118840725
NCBI-ProteinID:
XP_036603969
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All DBs
Position
1:complement(503978525..503980339)
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AA seq
604 aa
AA seq
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MGGGSGGGACRASQGPLGVLGYWARGSCYREVPLCFKLYNSVVGAVIGHGGTNIKEIQES
MGSTIQIIKGDLESETRIYGNKENQKSDKLMIEEIVQKIENFSEEDTKTGNTLKSSCNEN
SPEKKVPVIDWEAIKEDHLYYIKTKWDGLPPIKKDFYIESSKTKLMSQTQVDKWREENNN
ITSDDLRENXKHIIPIPVCTFEDAFHQYPDVVANIKKVGFTRPTPIQSQAWPIILKGIDL
IGIAQTGTEKTLAYIMPGFIHLDLQPEEKRDGPGMIVLTPTRELALQVESECKKYTYKGI
KSICIYGGGDRRGQIEHVTKGVDIVIATPGRLNDLQMNEFINLNSITYLVLNEADKMLDM
GFEPQIMKILLDVWPDRQTIMTSATWPDAVRRVSQKYLNDPMIVYVGTLDLAAVNNVKQK
IIITTEQEKPALIHSFVESMKPEDKVIIFVGRKLSADDISSDLSIKGLPVQSLHGNREQS
DHEXALDEFKTVIVRILITTDLASXGLDVLDITHVFNFDFPRNLEEYVHRVEHTGRAGHT
GESITLLTRNDWKVAGELINILERAYHEIPNELILMAERYKQHKQKKDEERNIARTRVRT
RNIY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggggggtggcagtgggggtggtgcctgcagagcctcccaagggcccttgggagtcctg
gggtactgggcccgaggctcctgctacagagaagtgccactctgttttaaactctacaac
tccgtggtaggggcggtcataggtcatggtggaacaaatataaaggaaattcaggaatca
atgggttctacaattcagataataaagggggatctcgaatcagaaaccagaatatatggc
aacaaggagaaccagaaatcagataagttaatgatagaggaaatagtacaaaaaattgaa
aatttttctgaagaggacacaaaaactggaaacactttgaaatcatcttgtaatgaaaat
agcccagaaaaaaaagtgccagtgattgactgggaggctattaaagaggaccacctctac
tacattaaaacaaagtgggacggtcttcctccaattaagaaagatttctacatagaatct
tcaaagacaaaattaatgtcacaaacacaagtagataagtggagggaagaaaacaataat
ataacatctgatgacttaagagaaaattaaaaacatataattcccattccagtatgtaca
tttgaagatgcatttcatcagtatcctgatgttgtggctaatataaagaaagtgggcttc
acaagacctacacctatacagtcacaagcatggccaataatattaaaaggaattgatcta
attggcatcgcccaaactggcacagaaaagactttggcctatataatgccaggatttatt
catcttgacctgcagccagaggagaaaagggatggtcctggaatgattgtgctgacacca
accagagaattggctctacaagtcgagagtgaatgtaaaaaatatacctataaaggaatt
aaaagcatttgtatatatggtggtggagacagaagaggtcagattgaacatgttactaag
ggtgtagatattgtcattgctacccctggtagactcaatgaccttcaaatgaatgaattc
atcaacctgaatagcatcacatatttggttctaaatgaggctgataaaatgttagatatg
gggtttgaacctcaaataatgaagattttattagatgtatggccagatagacaaactatt
atgaccagtgctacttggcctgatgctgtacgtcgagtttcacaaaaatatttgaatgat
ccaatgattgtttatgttggaaccctggatctcgctgctgtgaataatgtaaagcagaaa
ataatcataaccacagaacaagagaaacctgctcttatacattccttcgttgaatcaatg
aagcctgaagataaagtaattatttttgtgggcagaaaacttagtgctgatgacatatcc
agtgacctgagcattaagggtttacctgtacagtcattacatggtaatcgagaacaaagt
gatcatgaatgagcactggacgagtttaaaacagtaatagtaagaatattgataactaca
gatctggcatcatgaggtcttgatgtcttagatatcacccatgtttttaactttgatttt
cctcggaaccttgaagagtatgtccacagagtagaacatactggaagagctgggcataca
ggggaatcaattactctacttactaggaatgattggaaagtagctggtgaattaatcaat
attttggagagagcctaccacgaaattcctaacgagcttatattaatggctgaacgatat
aaacaacacaagcagaaaaaagatgaagaaagaaacatagcaagaactcgtgtaaggaca
agaaacatttattga
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