Trichosurus vulpecula (common brushtail): 118840941
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Entry
118840941 CDS
T10126
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvp03021
]
118840941 (TAF1C)
Transcription machinery [BR:
tvp03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
118840941 (TAF1C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
118840941
NCBI-ProteinID:
XP_036604227
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All DBs
Position
3:complement(382103438..382110242)
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AA seq
919 aa
AA seq
DB search
MDFPDNLFPTFFLPGPPGLSDSPGSYLAPAWSDCMQLLKPPQDPSVNPQHETSYVTKWGR
WTSDTPGPLPFLRPVAEPWEPELTSRDLLFQGQLRRPFGPKATVDVIEQLNQFLWDHGDV
AFGPLGRLLQENFNLGEPKKSQKDRTVMNAEWLVQDLSGHQPKGCPWAHLSARQRRFSLR
GGSVLGEEVDGLLGGLLHEELETRWKELLLNESRTGGALGWIPGARPHVGQLAYPTGQAC
NQLNFQKVKLSTTSGPQALGDPTRILLQGPVRQVVTRTIQEEALVAVRSDHHCAVWRVSR
QGHPEPLQVLGTEKGATGISLSPHLPGELAVCTRSGAVCLWSPQDGLQQIYKDPETLVFK
DPSSWRWADFTAHPRMLTVADRTGVRLTDVRGPPDRGELLFRVGAEASCKQGERVLLAQY
LGTSSPASLNPTLHLICTQFSLYLLDERLPLVPMLKWNHALMSPPLLAQLLPPPCPGAPL
PLLLGGLGGHLRMLHLSGGSSSTPQLAAPPQSLPSLRDSLPGFPVLEPHGEQLLQDRLKA
PLTGLAAVVPPSCPSPTMLLFQLSAAGDVFYQRLWLQPDTGSENADSLQNSNSCTDHADD
PGLDSHDQTTATSSLDTAPIPSAVSWNPRAVACCRRWLKTLLQVPPALPPWTPPTFSLHR
LRWSGKEDKGKGREGLQAAMAEGRLLQQGDLGPLPSSDPPPAHEPFGPEDKLTERLEASW
EGKGAIWWDSQQGDTQVLRKRRSREKRRTQLSSSFSSVRTTSDFSDIDSRHGTPSPLHRT
SEASQSLELSQEPWVRSVPRERRQTLRDYLAVLPSPDSGSCSTPQSQNPSSQTIPTSEPG
QHSVPRFQDPRTQTLLCPPPGSSSAHCSQNPSSQTPCSPDTRFNSLSHSQNSSVRSLPSR
HTPSLAGSQPRKKKPRMGF
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggatttccctgacaatctgtttcccacattctttttgcctggccctcctggcctgagt
gattcccctggttcctatctggcccctgcttggagtgactgtatgcagctgctgaagccc
ccccaggatccatcggttaacccccagcatgagacatcatatgtgacaaagtgggggaga
tggacgtctgacactcctggacccctgcccttcctgcgccctgttgctgaaccctgggaa
cctgagctgacctcccgagatctgcttttccaggggcaactgaggcgtccatttgggcct
aaagcgacagtagatgttatagaacagctcaaccagttcttgtgggatcacggggacgtt
gcctttgggcccctgggacggctgctgcaggagaattttaacctgggagaacccaagaaa
tcccagaaggacaggacggtgatgaatgcagaatggttggtccaggacctcagcggacac
cagcccaaggggtgcccctgggcccacctgagtgcccgtcagcgacggttctccctgcgg
gggggctcggtgctgggggaggaagtggatggcctgctgggggggctgctgcacgaggag
ctggagacacgctggaaggagctgctactgaatgaatctcgcacaggcggggctctcggg
tggattccaggggccagacctcacgttggccagctggcctaccccaccgggcaggcctgc
aaccagctgaacttccagaaggtaaagctgtccaccaccagtggaccccaggcccttgga
gacccaacccgaatcttgctccagggcccagtccggcaagtggtaacccgcacaatccag
gaggaagctctggtggctgtccgctctgatcatcactgtgctgtgtggcgggtcagtcgt
caagggcaccctgagcccctgcaggtgctgggtacggagaagggagccacggggatcagc
ctcagccctcatcttcctggagagctggcagtctgcactcgctcaggagctgtgtgtctg
tggagcccccaggatgggctgcagcaaatatacaaagaccctgagacccttgtcttcaag
gacccgtcttcgtggcgctgggcagacttcaccgctcacccccggatgctgactgttgct
gaccgcactggagtccgactcacagatgttcggggtcccccagaccgcggtgagcttctt
tttcgtgtaggggctgaagcctcgtgtaaacaaggggagcgtgtcttattggctcagtac
ttggggacatccagtcctgcctccctgaatcccacccttcatctcatctgtacacagttc
tctctctacctgctggatgagcgtttacctcttgtgccaatgctgaagtggaaccatgca
ctcatgtcccctccgctgctggctcagctcctgcccccaccctgtcctggggcgcctctt
cccttgctgcttggaggacttgggggccatctgcggatgttgcatctctcaggagggtcc
agtagcaccccccagctagcagcaccaccgcagtcactcccttcacttagggactcactc
cctggctttccagtccttgagccccatggtgagcagctgctacaggaccgtctcaaggct
cccctcacaggcttggctgctgttgtaccaccaagttgtccgagtcccaccatgctactg
ttccaactctcagctgccggagacgttttttatcagcgcctctggctccagccagacacc
ggttctgaaaatgccgactctctccaaaatagtaactcttgcactgaccatgctgatgat
ccaggcctcgattctcatgaccagaccactgctacctcatccttggacacagctcctatc
cccagtgctgtttcctggaatccccgggctgttgcttgctgccgccgttggttgaagacc
ctgctacaggttcccccagccctccctccttggacaccccctactttctccctacaccgt
ctccgatggtcagggaaggaagacaaagggaagggccgagagggcctgcaggctgccatg
gctgaaggccggctgctgcaacaaggggacctgggcccactcccttcctcggaccctccc
cctgcacatgagcccttcggtcctgaggacaagttgactgaacgtttggaagcatcttgg
gaggggaagggagccatttggtgggacagccagcaaggtgatacccaggtactaagaaag
cggcggtcacgggagaagaggcggacccagctctccagctctttctcttctgtcagaacc
acttctgacttctctgacatcgacagtcgccatggcactcctagccccctccacaggaca
tctgaagcttctcaatctctggagctgtctcaggagccatgggtccggagtgtaccccgt
gagcggcggcagacgcttcgagactatcttgcggtcctcccttctccagactcaggaagc
tgctctaccccccaatcccaaaacccaagcagccagaccatccccacctccgagccaggt
cagcactcagtaccacgcttccaggatccaaggacccagaccctcctttgtcctccccca
gggagctcctctgcccactgctctcaaaatccaagtagtcagaccccctgctcccctgac
acaaggttcaactctctatcccactcccaaaattcaagcgtccggagcctgccctcccgt
cacactccttcccttgcaggctcacagccccgcaagaagaaaccccgcatgggtttctaa
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