Trichosurus vulpecula (common brushtail): 118841058
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Entry
118841058 CDS
T10126
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
118841058 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvp03000
]
118841058 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tvp03310
]
118841058 (RORB)
Transcription factors [BR:
tvp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118841058 (RORB)
Nuclear receptors [BR:
tvp03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118841058 (RORB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118841058
NCBI-ProteinID:
XP_036604370
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Position
1:517690392..517770700
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AA seq
483 aa
AA seq
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MNDTLTSSEGKKKRASRAQNVCFPISAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRR
SQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAE
VQKHQQRLQEQRQQQNGEAEALARVYSSSISNGLNNLNNETGGTYSNGHVIDLPKSEGYY
NVDSGQPSPDQSGLDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIA
QNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKTREALWQQCAVQITHAIQYVVEF
AKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSD
DLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVI
QKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCTT
VCK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacacattgaccagtagcgaaggaaagaagaaaagagcctcacgagctcaaaat
gtctgttttcccatttcagcacaaattgaagtgataccatgcaaaatttgtggcgataag
tcctctggaatccactacggagtcatcacatgtgaaggctgtaagggattctttcgaagg
agccagcagaacaatgcttcttactcctgcccaaggcagagaaactgtttaattgacaga
acgaacagaaaccggtgccaacattgccggctgcagaagtgtcttgccctaggaatgtct
cgagatgctgtcaaatttgggaggatgtccaagaagcagagggacagcctgtatgcagaa
gtgcagaagcaccagcagcggcttcaggagcagcggcagcagcagaatggggaggcagag
gccctcgccagggtctacagcagcagcatcagcaatggcctgaacaacctgaacaacgag
acgggtggcacctattccaatgggcacgtcattgacttgccgaagtctgagggttattat
aatgtggattcaggccagccatccccagatcagtcaggactggatatgactggaatcaaa
cagataaagcaagagcctatctatgacctcacttctgtacccaacttgtttacctatagc
tctttcaacaatgggcaattagcaccagggataaccatgactgaaatagatcgaattgcc
cagaacatcattaagtcccatttggagacgtgtcaatacaccatggaggagctacaccag
ctagcctggcagactcacacgtatgaagaaattaaggcgtatcagagcaagaccagagag
gcattgtggcaacagtgtgctgttcagatcactcacgcaatccaatatgtggtggagttt
gcgaagaggatcacaggtttcatggagctctgtcaaaatgatcagattctcctcctgaag
tcaggttgcttggaagtggttttagtgagaatgtgtcgtgccttcaacccactaaacaac
actgttctgtttgaaggaaaatatggaggaatgcaaatgttcaaagccttaggttctgat
gacctggtgaatgaagcattcgactttgcaaagaatctgtgttccttgcagctgaccgag
gaagagattgccttgttctcatctgctgtgctgatatctccagaccgagcctggctgata
gaacctcggaaggtccagaaacttcaggagaagatttatttcgcgcttcagcatgtgatt
cagaagaatcacctcgatgatgagactttggcaaagttgatagccaagataccgactatc
accgcagtttgcaacttacacggagagaaactgcaggtatttaagcaatctcatcccgat
atagtgaacacactgtttcctccattatacaaggagcttttcaaccctgactgtaccaca
gtctgcaaatga
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