Trichosurus vulpecula (common brushtail): 118841169
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Entry
118841169 CDS
T10126
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp01524
Platinum drug resistance
tvp03430
Mismatch repair
tvp05200
Pathways in cancer
tvp05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118841169 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118841169 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
118841169 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
118841169 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118841169 (MSH6)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
118841169 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
118841169
NCBI-ProteinID:
XP_036604458
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All DBs
Position
3:complement(344246833..344280496)
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AA seq
1408 aa
AA seq
DB search
MSRQSTLFSFFPKSPALCSNNKAAAIAADGSGAGAGAGAAGAGGSGASSARGDAARSEEA
HPSPAPAALPGPGPHGLSPHGPSPSPSPSPRPRSSSGVAPLPREIKLNGGPRRRATVTPA
PTPAPAPAPAAPPASSCDFSPGDLVWAKMEGYPWWPCLVYNHPTEGTFIRERGKTFRVHV
QFFDDNPVRGWVNKRLVKPYTGSKCKEAQKGGPFYTAKPEILRAMQLADDAISIEKNKRL
ELAVCDEPSDPDEEEMEVAVASASDNSGEDLESEEEVRPKRQMAKRSTARNKKRRVVSDS
ESDVGGSDVEFKPDAKEEGSSDEASSGMGESDSDVDSPVKAAPKRKRGAAVNTSLRRKSL
GGGAPNVPKRVVGVSSETKNTLSAFSAPQNFESQAQVSGGGDGSCGSTQWYHETLEWLRE
GKRKDTCRRRPDHPDYDPNTVHIPEDFLNTCTPGMRRWWQIKSQNFDLVIFYKVGKFYEL
YHMDAVIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEAR
CRKLAHISRFDRVVRREICRVITKGTQTYSVLDGEPSESNNKYLLCVKEKEEEASGHMRL
YGVCFIDTSVGKFYMGQFSDDRHCSRFRTLVAHYTPAQILFEKGNLSAETRKVLKGSLSS
SIQESLTPGSQFWDAAKTLRTLHEEGYFKEKLNVADGAVLPPVLKNMTSESDTIGLTPNE
KSELALSALGGCVFYLKKCLIDYELLSMANFEEYIPVDADMVKAVKPSAVFAKRECRMVL
DAVTLSNLEILQSAVNGSTEGTLLERIDTCCTPFGKRLLKQWLCAPLCNPSSINDRLDAV
EDLMAVPDKISEVVDLLKKLPDLERLLNKIHSVGSPLKSQKHPDSRAIMYEETTYSKKKI
VDFLSTLEGFKVMCKIIGIMEEVADNFKSKILKQVITLRTQNLGGRFPELTTELNRWDTA
FDHEKARKTGIITPKTGFDSDYDQALVDIKDNEQSLLDYLEKQRKRIGCRSIVYWGVGKN
RYQLEIPESFTLHDLPGEYELKSTKKGCKRYWTKDIEKKLADLMNAEERRDVSLKDCMRR
LFFNFDKNYRDWQTAVECIAVFDVLLCLANYSRGGDGHMCRPVIHVPDEDTQPFLKLKGS
RHPCVTNNFFGDDFIPNDIMIGCKEEDSEDSTWDAYCVLVTGPNMGGKSTLMRQAGLLVI
MAQMGCYVPAEVCSFTPVDRVFTRLGASDRIMSGESTFFVEMNETASILQHATEHSLVLM
DELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVCLGHMACMVE
NECEDPSQETITFLYKFTKGACPKSYGFNAARLACLPEEIIQKGHRKAKEFEKMTQSLRL
FREVCLALENSAADVQAVRKLLTLIKEM
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcaccctattcagcttcttccctaagagcccggcgctgtgcagcaac
aacaaggccgccgccattgctgcagatggaagcggcgccggggccggagcgggggccgcg
ggggccggaggctccggggcctcctccgcgcgcggggacgcggcccggagcgaagaagcc
catccgagtcctgcgcccgctgccctcccaggccctgggccccacggcctcagcccccac
ggccccagccccagccccagccccagcccccgcccccgctccagctccggggtcgctccg
ctgccccgagagataaaactcaacggaggaccgcgccggcgagcgacggtaacgccggcc
ccgaccccggccccggccccagccccggcggctcctcccgccagctcttgtgacttctct
cctggtgatttggtttgggccaagatggaaggttacccctggtggccttgccttgtgtat
aatcaccccactgaaggaacgttcatcagagaaagggggaaaactttccgtgtccatgta
caattttttgatgacaatccagtgaggggctgggttaacaaaaggcttgtaaagccatat
acaggttcaaaatgtaaggaagcccagaaaggaggtcctttttatactgcaaagcctgaa
atactcagagcaatgcaactggcagatgatgccataagtatagagaagaataagcggctt
gaattagcagtttgtgatgagccttcagatccagacgaggaggagatggaggtggctgta
gcttctgcatcagataacagtggagaggatctagagagtgaagaggaagtgagacccaag
aggcagatggctaagcgcagcacagcccggaacaaaaaacgcagagttgtttcagactca
gagagtgacgttggtggctctgacgtagagtttaaaccagatgccaaggaagaagggagc
agtgatgaagcaagcagcggaatgggcgaaagtgatagtgatgtggacagtcctgtcaaa
gctgccccaaaacggaagaggggggctgctgtgaacacctccctcaggaggaagagtttg
ggaggtggtgctcctaatgtacccaaacgagtagtaggagtttcctcagaaactaagaac
acattgagtgctttctctgctccacagaactttgagtcccaagcccaagttagtggaggt
ggtgatgggagctgtggctctactcagtggtaccatgaaaccctagaatggttaagggag
ggaaagaggaaagatacatgcaggaggcgaccagatcatcctgattatgacccaaacact
gtccacatccctgaagatttccttaacacctgtactccaggaatgagaaggtggtggcag
atcaagtctcagaactttgacctagtaatcttctataaagtggggaagttctacgagctg
taccacatggatgcagtcattggagtcaatgagctggggctagtgtttatgaaaggcaat
tgggcccattccggtttcccagaaattgcatttggtagatattcagattccttagttcag
aagggttataaagttgctcgagttgagcagacagagactcctgagatgatggaagctcgc
tgccgaaagttggctcacatatccagatttgatagggtggtacggagagagatatgcaga
gttattaccaagggaacacagacttacagtgtgctggatggtgaaccttctgaaagcaac
aataaatatctgctgtgtgtcaaagaaaaagaggaggaagcttctggtcacatgcgtttg
tatggtgtttgctttattgacacctctgtaggcaagttttacatgggtcaattttcagat
gaccgtcattgctcccgatttaggactctggtggcacattacactcctgcacaaatactg
tttgagaaaggaaatctctctgctgaaacaaggaaggtcctgaagggttctttatcttct
tccattcaggaaagtctgacaccaggctcccagttttgggatgcagctaaaaccttgaga
acactccatgaagaaggatactttaaagaaaagctaaatgtggctgatggggcagtgtta
ccccctgtgcttaaaaacatgacatcagaatctgacaccattggcttaacacctaatgag
aagagtgagctggcattgtctgctctgggtggttgtgtcttctacctcaaaaaatgcctt
atagattatgagcttttgtctatggccaactttgaagaatacattcctgttgatgctgat
atggtgaaagctgtgaagcctagtgctgtctttgctaagagagaatgtcgaatggtgcta
gatgctgtgaccctgagcaacctggagattcttcagagtgcagtaaatggctcaactgaa
ggaacactgttagagaggattgatacttgctgtactccctttggaaagcggctcttaaaa
cagtggctctgtgctccactttgtaacccatcttcaatcaatgaccgtttagatgcagtg
gaagatctcatggctgtgcctgacaaaattagtgaagtagttgaccttctgaagaaactt
ccagaccttgagaggctgttgaacaagattcatagtgttggctctccactgaagagtcag
aagcacccagatagcagagctataatgtatgaagaaaccacttacagcaaaaaaaagatt
gttgatttcttgtccactctggaaggattcaaagtgatgtgcaaaattattgggattatg
gaagaagtggcagataatttcaagtctaaaatccttaagcaagtaattacactccggacc
caaaatttagggggtcgtttccctgaattgaccacagaattgaaccgatgggatacagcc
tttgaccatgaaaaagctcgaaagactggaataattactcccaaaacaggatttgactct
gattatgaccaagcattggttgatatcaaggacaatgagcagagcctcttagactattta
gagaaacagcgcaaacggattggctgcaggtccatagtctactggggtgttggcaaaaat
cgctatcaattggaaattccagaaagcttcacattgcatgatttgccaggagaatatgaa
ctaaagtccaccaagaaaggctgtaaaaggtactggacgaaggacattgagaaaaagctt
gctgatctgatgaatgccgaagagcggagagatgtatcactgaaggactgtatgaggagg
ctcttctttaattttgataaaaattacagagactggcagactgctgtggagtgcattgct
gtgtttgatgtcttattatgcttggctaactatagccgaggtggtgatggtcatatgtgt
cgcccagtaatccacgtaccagatgaggatactcaacccttcttaaagctaaaaggatct
cgacacccatgcgttacaaataatttttttggtgatgactttattcctaatgacattatg
ataggctgtaaggaagaagattcagaagacagtacctgggatgcttattgtgtgctggtt
actggaccaaatatgggaggcaagtcaaccctcatgagacaggctggtcttttggttata
atggctcagatgggctgttacgttcctgctgaagtttgtagtttcaccccagttgacaga
gtgttcactagattaggtgcttcagacagaataatgtcaggtgaaagtaccttttttgtt
gaaatgaacgagactgccagcatacttcagcatgcaacagaacactccttggtgctcatg
gatgaactaggtcgaggcaccgcaactttcgatggcacagctatagcaaatgcagttgtt
aaagaactggccgagaccataaagtgtcgtactttattctctacacactaccattcgtta
gtagaggattactcccaaaatgttgctgtgtgcctaggacacatggcatgcatggttgaa
aatgaatgtgaagacccaagccaggaaaccattaccttcctctataaatttactaaaggt
gcttgtcctaaaagctatggattcaatgcagcaaggctcgcctgtcttcctgaagagatt
attcagaaaggccataggaaagcaaaagaatttgagaagatgacccaatcattgagacta
tttcgggaagtttgcctggctcttgaaaattcagctgcagatgtccaggctgttcgcaag
ttgttgactttgatcaaggaaatgtaa
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integrated database retrieval system
