Trichosurus vulpecula (common brushtail): 118841222
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Entry
118841222 CDS
T10126
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118841222 (GEN1)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118841222 (GEN1)
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
118841222
NCBI-ProteinID:
XP_036604506
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Position
3:complement(414858812..414883200)
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AA seq
891 aa
AA seq
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MGVNDLWPILEPVKQHAHLQSLQGKTLAVDLSLWVCEALTVKKMIGTVVKPHLRNLFFRI
SSLTLMGVKLIFVMEGDAPKLKADVMSKRNEMRYGPPQNQARRPKRSCFKAVLKECLDML
ECLGVPWVQAAGEAEAMCAYLNAQGYVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDC
YTMSSIKKKLGLDRDSLIGLAVLLGCDYLPKGVPGVGKEQALKLIRALKGQSLLQRFDQW
KEESNSLDPPPVAVKKPAHCSVCAHPGSPKDHERNGCRLCESERYCEPHDYEYRCHCEWH
HMEHRRQQGSVEDGVKKRACSCEGFPFHEVIQEFQLNKDRLMKKIHCQRPDLQSFQMFAL
EKMEWPRHYACEKLMVLLTHHDMMERKSGRVGPGQLRPVRITHTRIRNGIPCFEVQWQKP
EHYVIAAEAVPGTDVQPGPLAVLTVEEASLFEAAYPNVVAQYQEQVLESRVKKPKSKKNK
PKRGDLPELEEVAGLLSQVKLSHEMVPGQNLKSNLKIPPDEKWQQKTTPAVDSWLFVGAP
LNSKARQPPAPSPLRLRTAQHDAAGDCSSSVSEHQDNSSVIEALQLSSIDWEGTSFSASP
GTQAPTTSAHLSDPGGDPGQLLLATISGAGSIHDIRGQDPWNSGPARGHSALDLNLLPLK
ERVCARAWEQSQYSSPLDGCPTHWIGLEASSLPRTEGNLAAKSRSSCEPQQIDHHPPGRL
PVFGLQNGQEKSDMAPRKAPFLEEKPRVNTCVPHIPRKTAERHVGQEHTQVHPESQTALK
RVPKKSVCLPCSSSNEENEPAGRNEKCPCPKGKLWPQQRHPTCLLTNVPKPAPREACQGA
GAPRPAKITESSPRPALSPFPLPHGEEKDASLVLESPLPLAQRLKLKFQSS
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaatgatctgtggccgattctggagcctgttaagcagcatgcccatctccag
agcctccaggggaaaaccctcgcagttgatctgagtctctgggtgtgtgaagcgctcaca
gtcaaaaagatgattggcaccgttgtcaaaccccatctcaggaacttgttttttcggatc
tcgtctctgactttaatgggagtaaaattgatctttgttatggaaggcgacgctcccaag
ctgaaagcggatgtgatgagcaaaaggaatgaaatgcgttatgggcccccccaaaaccag
gcccgcaggcccaaaagatcctgtttcaaggccgtcttaaaagagtgccttgacatgttg
gagtgtttgggagttccttgggttcaagcagctggggaagctgaggctatgtgtgcttac
ctcaatgcccaaggctatgtggacgggtgcctcaccaatgatggagatgctttcctttat
ggggcgcagactgtttatcgaaacttcactatgaatacaaaggacccccacgtggattgc
tatacgatgtcctcaattaagaagaagctgggcttggatcgggactccctgatcggcctg
gccgtgctgctgggctgtgactaccttccaaagggtgtccctggtgttggaaaggagcag
gcattaaagctcatacgtgctttgaaagggcagagtttgctgcaaaggtttgatcagtgg
aaggaggagtccaacagccttgacccaccaccagtcgcagttaaaaagccagcacattgc
tccgtgtgtgcccatccaggctcccccaaggaccatgagcgtaacgggtgcagactgtgt
gaaagtgagagatactgtgaaccccacgattatgagtaccgctgccattgtgagtggcat
cacatggagcacagaagacagcaaggctcagtcgaggacggcgtcaagaagagagcttgc
agttgtgaaggattcccgttccacgaggttattcaagaattccagttgaacaaggataga
ttgatgaagaaaatccactgccagagacctgacttacagtcttttcagatgtttgctttg
gagaagatggagtggcccaggcactacgcatgcgagaagttaatggtgcttttgacacat
catgacatgatggagaggaagtctggccgggtgggtcctggccagctgcggccagtgcgg
ataacccacacccgcatcaggaacggcatcccctgttttgaggtccagtggcaaaaacca
gagcactacgtgatagctgctgaagctgtccctggcaccgatgtccagccagggccactt
gctgtgctcacagtggaggaagcctccttattcgaagctgcctaccccaatgtggtcgcc
cagtaccaagagcaagtgctagaaagccgggtgaagaagcccaaaagtaagaaaaataag
cccaagagaggtgatttgccagaattggaggaggtggcaggtcttctgtcgcaggtgaaa
ctctcccatgaaatggtaccagggcagaatttaaagtcaaacctgaaaattcctcctgat
gaaaaatggcagcagaaaaccaccccagcagtggacagctggcttttcgtgggggctccc
ttgaattccaaggcccggcagccccccgccccttcccctctgagactcaggaccgcgcag
catgatgctgctggtgattgttcatcgtctgtgtccgagcatcaagacaacagctcagtg
atcgaggcccttcagctgagctccattgactgggagggcacttccttcagcgcttcacca
ggtacacaggcacctacaacttctgcccacctctcagaccctggaggggaccctgggcaa
ctccttcttgcaacaatatctggtgctggaagtatccatgacatacgtggccaggacccc
tggaattctggccctgccagagggcattcagctctcgatttgaaccttctgcctctaaag
gagcgagtgtgtgcccgggcctgggagcaatcccagtactcctcccctctggatgggtgt
cctacccactggataggattggaagcttcatcactgcccaggacagaagggaaccttgct
gctaaaagcaggtcctcttgtgagccccagcaaattgatcatcatccaccaggtaggctc
ccagtgtttggtttgcaaaatggccaggaaaaatctgacatggcacccaggaaagcgccg
ttccttgaggagaagcccagagtgaacacttgtgtgccccacatccccaggaaaacagca
gagaggcatgtgggccaggagcacacccaagttcatcctgagtctcaaactgctctgaag
agagtccccaaaaagagtgtttgcctcccctgcagctcctctaatgaggagaatgagcca
gctggcaggaatgagaagtgtccgtgtccaaaagggaagctgtggcctcagcagcgccac
cccacctgtctcctgaccaatgtccccaagccagctcccagagaggcttgtcaaggggcc
ggggctccccggccagccaagatcacagaaagctctccacgaccagcactgagccctttt
ccactccctcatggagaagagaaagatgccagtcttgttttggagagcccccttcctttg
gctcagaggttgaagctgaaattccagagcagttga
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