Trichosurus vulpecula (common brushtail): 118841372
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Entry
118841372 CDS
T10126
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1-like
KO
K03260
translation initiation factor 4G
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09160 Human Diseases
09166 Cardiovascular disease
05416 Viral myocarditis
118841372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118841372
03012 Translation factors [BR:
tvp03012
]
118841372
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118841372
mRNA cycle factors
Stress granule specific factors
118841372
Translation factors [BR:
tvp03012
]
Eukaryotic type
Initiation factors
eIF-4
118841372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
118841372
NCBI-ProteinID:
XP_036604655
LinkDB
All DBs
Position
3:complement(22114431..22119025)
Genome browser
AA seq
1527 aa
AA seq
DB search
MMIPSQISYPASQGAYYIPGQGRSTYVVPTQQYPVQPGAPSFCPGASPTEFGTYAGAYYP
AQGVQQFPPGVAPAPVMMNQPPQIPPKMEWKMIRIRDPNQGGKDITEEIMSGARTSSTPT
PLQTGGGLEPQANGETPQVAVITHPDDRPQGVTIGGRPGAAPEHSPSESPSQPSSPSLTP
SPPPPVLQPGPEPGLSGLPITEDTMTTTVVMQMSVEEPAPTTHKAPELPCLALALQQPCA
SPGPSPEAEVTSPPPAPETATAQAHSFQQPPDTELSPEPNGMAPAKEPEAQPEVGQAEAV
PVPPPPSPACPQEFTVAAPTAQPEELPNRASPPPAMDLSPIAEPEEPAEEVAVLAVVPAS
TPALPTLPANFPGPSAPPPAQEEELENEEEEEDKEEGETEGKKGGEESLPPETTPTPAPL
PQSLEEIATQVVAISVPKKRWRIKELNKKETVGDLLDAFKEGNEGVPESESQSPVGGAPT
PEPEGGPRSPRPEEADETWEEKEDKIDDAENMQPGDQKYQYKSDQWKPLNPEEKKHYDQE
FLLGFQFIFASMQKPEGLPHISDVVLDKANKTPLWPLDPTQLTIMNSGPDFTPSFTNLGW
PNLSNRGPPRGGPGGGPGSELPRGLLTDLGLQRSHQGLRKEPRKIIATVLLSEDVKLNKA
EKAWKPSSKRGPTEKDRGEEDAYGSKTQHLFXRVRSILNKLMPQMFQQLMKQVQQLAINT
EERLKGIIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTTDKPTVTVNFRKLLLNRCQKE
CEKDKDDNEVFEKKQKETDEAATAXERGRLKEELEEARDIACPRSLGNIKFIGELFKLKM
LTEAIMHDCVVKXLKNDDEESLECLCRLFTTIGKDLDFEKAKPRMDQYFNQMEKIIKEKK
TLSRIPFMLQDLLDLRRSSWVPRRGDQGPKTIDQIHKEAEMEEHHEHIKVQQLMAKGGDK
RRGXPPPGSRGGLIVVNGGWNTVPISKGSRPIDTSQLTKITKPGSIDSNNQLFAPGGRLS
WGEGSSGGMGGKPSDSASETARLSTTALNRFSALQQAAPPPPPPQSTDTWRVVQRRSLSW
ERGEKAGDRGDRLERSEWGGERGDRLDPAXAPKWSFSKEVEEESRERPLQPEGLRKAASL
TEVGQSGRSETGGSCCPPSTPKAALSEEELEKSKAITEEFLHLNDTKEVVQCLQELASPS
LLFIFVRNSIESTLERWTVAREHMGQLLHQLLCAGHLTTVQYYQGLHEILEVAEDMEIDI
PHVQLYLAELVTPILREGGVPMGEFFREILKPLKPLGKASPLLLEILRLLCKSVGHKKVG
VLWREAGLSWKEFLPEDQDINAFVIQQKVEYTLGEETEPPSQREMSPEELSQRLKKLLKE
STSNQRICDWIEANLSEQQVASKTLVRALMTAVCYSAIIFETPLRVDVAVLKAQAKLLQK
YVNDEQKELQALYAPQALVVTLEQPANLLRMFFDALYDEDVVKEEAFYSWESSKDPAEQQ
GKAVALRSVTAFFTWLREAEDDESDHN
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcccctcccagatctcctacccggcctcccaaggcgcctactacatccctgga
cagggccgttccacatatgttgtcccaacccagcagtatccggtgcaaccaggagccccc
agcttctgtcctggagcaagccccactgaatttgggacctatgctggtgcctactaccca
gcgcagggtgtgcagcagtttccacctggcgtggcccccgccccagtcatgatgaaccag
ccaccccagattcctcctaagatggaatggaagatgattcggatccgagatcccaaccag
ggagggaaggatatcacagaggagatcatgtctggggcccggacctcctccacccccact
cctctgcagacaggaggaggtctggagcctcaggctaacggggagaccccccaggttgct
gtcatcacccacccagatgaccggcctcagggagtgaccatcgggggccggccgggggct
gccccagagcacagcccttccgaatctccatcacagccatcctctccttccctgacccca
tcaccaccacctccagttttacagccagggcctgagccaggcctctcaggcctccccatt
actgaggacacgatgacaaccacagtggtcatgcagatgagtgtcgaggagcctgccccc
accacccacaaagccccagagctgccctgccttgctcttgctctccagcagccctgtgcc
tcccctggaccctccccagaggcagaagtaactagtcctccaccagcccccgagactgcc
actgcccaggctcacagcttccaacagcctccggacaccgagctttctccagagcccaat
ggcatggcccccgccaaggagcccgaggcccagccagaggtgggccaggctgaagcggtt
cctgtgccgccacccccctccccagcctgtccccaggaattcacagttgcggcccctacg
gcccagcctgaggagctgcccaacagggcctcccctccccctgccatggacctgagccct
attgctgagcccgaggagccggctgaggaggtggcggtgctggcggtggtgccagcctca
acgccggcactccccaccctccctgccaactttcccgggccatctgctccacctcctgcc
caggaggaggagctagagaatgaggaggaggaggaggacaaggaggaaggggagactgaa
gggaagaagggaggagaggaatcgttgccccctgagaccacccccaccccagcccccctt
ccccagagccttgaagagatagccacccaagtggtggcaatatctgtgccaaagaagaga
tggagaatcaaggaactgaacaagaaggaaactgtgggcgatctgctggatgccttcaag
gaggggaatgaaggtgtgccagagtcagaaagccagtcgcctgtgggcggtgcaccaacc
cccgagcctgagggtggcccacggagccctaggcctgaggaggctgatgagacctgggag
gaaaaggaagacaagattgatgatgctgagaacatgcagcctggggaccagaagtaccag
tacaagtcagatcagtggaagcctttaaatcctgaggagaagaagcactatgatcaggag
ttcctgcttggattccagttcatttttgccagtatgcaaaagccagaaggcctgcctcac
atcagcgatgtggtgctggacaaggcaaacaagacccctctgtggccgctggaccccacc
cagctaaccatcatgaactctggccctgacttcaccccatcttttaccaacctgggttgg
cccaacctcagcaatcgaggccccccgagggggggtcctggtgggggaccaggcagtgag
ctaccccggggactgctgaccgatcttggcctccagcgctcccaccagggccttcggaag
gagcccaggaagatcatcgccacagtattgctcagtgaggacgtgaagcttaacaaagcc
gagaaggcctggaagcccagtagcaaacgtggccctacagaaaaggaccggggagaagaa
gatgcctatggcagcaaaactcagcacctattctgaagggtgcgatccattctgaacaag
ctgatgccccagatgttccagcagctgatgaagcaggtacagcagctggccatcaacacg
gaggagcgcctgaaaggcatcatcgacctcatcttcgagaaggccatctcggagcccaac
ttctcagtggcctatgccaacatgtgccgctgcctcatggggctgaaggtgccaaccacc
gacaagcccacagtcacagtcaatttccggaaactgctgctaaaccggtgccagaaggaa
tgtgagaaagacaaagatgataatgaagtatttgagaaaaagcaaaaggagacagatgag
gctgcaacggcanaagaacggggccgcctgaaggaggagctggaggaggcaagagacatc
gcctgcccacgctccctgggcaacatcaagttcatcggggagctttttaagctgaagatg
ttgacggaggccatcatgcacgactgcgtggtcaagtgactgaagaacgacgacgaggag
tctctggagtgcctctgccggctgttcactaccatcggcaaagatctggactttgagaag
gccaagccccgcatggatcagtatttcaaccaaatggagaagatcatcaaggaaaagaag
acgttgtcgagaatcccgttcatgctgcaggacttgttagatctccgaagaagtagctgg
gtgccccgccggggagaccagggccctaagaccatcgaccagattcacaaggaggctgag
atggaggaacaccacgagcacatcaaagtccagcagctcatggccaagggcggggacaag
cgtcgaggcnnccctccgccaggcagccgtggggggttgattgtggttaatggaggctgg
aatactgttcccatcagcaaaggcagcagacccattgatacctcccaactcaccaagatc
actaagcctggatccattgactccaacaaccaactctttgcccccgggggacgcctaagc
tggggtgagggcagcagtgggggcatgggaggcaagccctcagactcagcctctgagacg
gcccggctgtccaccactgccttgaaccgtttctcagccctccaacaggcagccccgccc
ccccctcccccccagagcaccgacacatggcgagtggtacaaaggcgcagtctgagctgg
gaacgtggagagaaagctggggatcgtggagatcgcctggagcgtagtgaatggggtggg
gagcgtggtgaccgcctggacccagctnntgcgcccaagtggagcttcagcaaggaagtg
gaggaggagagccgggagcgacctctccaaccagagggtctacgcaaggcggccagcctg
acagaggtcgggcagtcgggacgcagtgaaacgggagggagctgctgcccccccagtacc
cccaaggctgcgctatctgaggaagagctagagaagtccaaagccatcactgaggagttc
ctgcatctcaatgatacgaaggaagtggtacagtgtttgcaggaacttgcctccccttca
ctgcttttcattttcgttcggaacagcatcgagtcgactctggagcgctggactgttgcc
cgggaacacatgggacagttgttgcaccagcttctctgtgctggtcacctcactaccgtt
caatattatcaagggctccatgagatcctggaagtggctgaagacatggagattgacatc
ccccacgtgcagctgtacttggcagaactggtgactcccatccttcgggaaggtggggta
cccatgggggagtttttcagggaaatattgaagccgctgaaacccctaggcaaagcttct
cccctgctgctggagatcctgaggctcttgtgcaaaagtgtgggtcacaaaaaggtcggg
gtgctgtggcgagaggctgggctcagctggaaggaattcctacctgaggaccaggacatc
aatgcctttgtcatccagcagaaagtggaatacacactgggagaggagactgagcccccc
agccagcgagagatgtcccctgaggagctgagccagcggctgaagaagctgcttaaggag
agcaccagcaaccagcgaatctgtgactggatagaggccaacctgagcgagcagcaggtg
gcttccaaaacgttggtccgtgcactcatgaccgctgtctgctactcagccatcattttt
gagacccccctgcgagtggatgtggccgtgctgaaggcgcaagcgaaacttctacagaaa
tacgtgaacgatgaacagaaggagctgcaggcgctctacgccccccaggcgcttgtggtc
accctggagcagccagccaacctactacgcatgttctttgatgcgctctatgatgaagac
gtagtcaaagaggaggccttctacagctgggagagcagcaaggaccccgctgaacagcag
ggcaaggctgtggccctcaggtctgtcactgccttcttcacgtggctgcgtgaggcggag
gatgatgagtctgatcacaactga
DBGET
integrated database retrieval system
