Trichosurus vulpecula (common brushtail): 118841819
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Entry
118841819 CDS
T10126
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118841819 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvp03021
]
118841819 (SF3B3)
03041 Spliceosome [BR:
tvp03041
]
118841819 (SF3B3)
03036 Chromosome and associated proteins [BR:
tvp03036
]
118841819 (SF3B3)
Transcription machinery [BR:
tvp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
118841819 (SF3B3)
Spliceosome [BR:
tvp03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
118841819 (SF3B3)
Complex B
118841819 (SF3B3)
Complex C
U2 SnRNP specific factors
118841819 (SF3B3)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
118841819 (SF3B3)
TFTC complex
118841819 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
118841819
NCBI-ProteinID:
XP_036605369
LinkDB
All DBs
Position
3:398271153..398304688
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFANTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacttgaccttgcagcgagccactggtatcagctttgccatccatggc
aacttctcaggaaccaaacaacaggagattgttgtttctcgagggaagattttggagctg
ctccggcctgaccccaatactgggaaggtgcacaccctattgactgtggaagtgtttggt
gttatcagatccctcatggccttcaggttgacaggtggtacaaaagattacatcgtggtt
ggcagtgactcaggccgaattgtcatcctggagtatcagccatccaagaacatgtttgag
aagatccatcaggaaacttttggcaagagtgggtgccgccgaattgtacctggacaattc
ttagctgttgatcccaaaggcagagctgtcatgattagtgccattgaaaagcagaaactg
gtttacattctgaacagagatgctgctgcccggcttaccatttcttcccctttagaagcc
cacaaggctaatactttggtttatcatgtggtgggagtagatgttggatttgaaaatccc
atgtttgcttgtctggagatggattatgaggaagcagacaatgatccaactggtgaagcc
gcagccaatacccaacagaccctcacattctatgagttagatttagggttaaaccacgtg
gtccgaaaatacagtgagcctttggaggagcatgggaacttcctcatcacagtgccagga
ggctcagatggtccaagtggtgtattgatctgttctgaaaactacatcacctataagaac
tttggtgatcagcctgatatccgatgtcccattcctaggaggcggaatgacttggatgac
cctgagagaggaatgatttttgtctgctctgccacccataagaccaagtctatgttcttc
tttttggcacaaactgagcaaggagatattttcaaaatcactttggagacagatgaagac
atggttactgagatccgcctgaagtattttgatactgtccctgtggctgctgctatgtgt
gtgctcaaaacaggcttcctctttgtggcatcagaatttggaaatcattacctgtatcag
attgcccatcttggtgatgatgatgaagaacctgagttctcatctgccatgcccctggaa
gaaggagacacattctttttccagcctcggcctctcaagaacttagtgttggtggatgaa
ctggatagtctctcccctattctgttctgtcagattgctgatttggccaatgaagacacc
ccacagctgtatgtagcttgtggcaggggaccacgatcttctctaagggttttaaggcat
ggactggaggtgtcagaaatggccgtctctgagctgcccggtaaccccaatgctgtctgg
accgtacggcggcacattgaagatgaatttgatgcctacatcatcgtgtctttcgtgaat
gccactctggtactttctattggagagactgtagaagaagtaacagactctggctttctg
ggtaccactccaaccttgtcctgttccctgttaggggatgatgctttggtgcaggtgtat
ccagatggcatccggcacattcgagcagataagagagtaaatgagtggaagaccccggga
aagaaaactattgtgaagtgtgcagtaaaccagcggcaggtggtgattgccctgacagga
ggagagctggtctacttcgagatggatccctcaggacagctgaatgagtacactgagcga
aaggagatgtccgcagatgtagtatgcatgagtttggccaacgtgcctcctggggagcaa
cgctctcgttttctggctgtggggctggtcgacaacaccgttcgaatcatctctttggac
ccttcggactgcctccagccgctgagcatgcaggccctcccagcccagccagaatcgctg
tgtattgtcgagatgggtggggctgagaagcaagatgagctgggggaaaggggctccatt
ggcttcctctacctaaacattgggctgcagaatggtgtgctgctaaggactgtcctagac
cctgtgactggtgatctgtctgatacccgtacaagatacttgggctctcgccctgtgaag
cttttccgagtccggatgcagggccaggaagcggttttagctatgtcgagccgctcatgg
ctgagctattcttaccagtcccgctttcatctgacccccttgtcctatgagaccctggag
tttgcatctggatttgcatctgagcagtgtccagagggtattgtggccatctctaccaac
actttaaggattttggctttggagaagctcggtgctgtcttcaatcaggtagcatttccc
ctacagtacactccaaggaagtttgtcatccaccctgagagcaacaaccttatcatcatt
gagacagatcacaatgcctatactgaggccacaaaagcacagaggaagcaacagatggca
gaggaaatggtagaagcagcaggggaagatgagagagaattggctgctgagatggccgct
gccttcctgaatgaaaatctcccagaatcgatcttcggagcccccaaagcaggcaacggg
cagtgggcttctgtggtccgagtcatgaatcccatacaaggaaacacactggatcttgtt
cagctggaacagaatgaggctgcttttagtgtggcagtatgccgattcgcaaatactggt
gatgattggtatgtgctggtgggtgtagccaaagacctcattctgaacccccgatctgtg
gctggaggctttgtctatacctataaacttgtgaacagtggagagaaactagagtttttg
cacaagaccccagtcgaagaggtccctgcagccattgccccgttccagggcagggtattg
attggcgtgggaaagctgttgcgggtctatgacctcgggaaaaagaagttgctccgaaaa
tgtgagaataagcacattgcaaactatatttcgggaatccagacaattggacaccgggtc
attgtgtctgatgtccaggagagtttcatctgggtcagatacaagcgcaatgaaaatcag
ctcatcatctttgctgatgacacctatccccgttgggtcacaacagccagcctcttggac
tacgatactgtggctggggctgacaagttcggcaacatttgtgtggtgaggctcccaccc
aataccaatgatgaagtggatgaagacccaacaggaaacaaggccctgtgggaccggggg
cttctcaatggtgcctcgcaaaaggcagaagtaatcatgaattatcatgtaggggaaaca
gtgctttccttacagaagaccacgctgatcccaggaggctcagaatcccttgtctatact
accttgtcaggtggcattgggatccttgtgcctttcacatcccatgaggatcatgacttc
ttccaacatgtggagatgcacctgcggtctgagcatcctcctctctgcggaagggaccat
ctgagcttccgttcctactacttccctgtgaagaatgtgattgatggtgacctttgtgaa
cagttcaactcaatggagcccaacaaacagaagaatgtatcggaagaattggacagaaca
ccacctgaggtctcaaagaagctagaagatatccgtactcgctatgctttctga
DBGET
integrated database retrieval system
