Trichosurus vulpecula (common brushtail): 118841942
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Entry
118841942 CDS
T10126
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvp03000
]
118841942 (CTCF)
03036 Chromosome and associated proteins [BR:
tvp03036
]
118841942 (CTCF)
Transcription factors [BR:
tvp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
118841942 (CTCF)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118841942 (CTCF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
zf-C2H2_CASZ1
zf-WIZ
DUF8106
HMBD
Zn_ribbon_DUF2089
DUF7410
Motif
Other DBs
NCBI-GeneID:
118841942
NCBI-ProteinID:
XP_036605551
LinkDB
All DBs
Position
3:379878039..379922418
Genome browser
AA seq
728 aa
AA seq
DB search
MEGEAVEAIMEESETFIKGKERKTYQRRREGGQDEDACHISQTQADGSEVVQEVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVPQEADATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLPEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCTGLDGIDGENGGETKKGKRGRKR
KMRSKKEESSDSEENAEPDLDDNEDEEETAVEIEAEPEVQPVTPTPPPAKKRRGRPPGKA
SQPKQAQPTAIIQVEDQNTGAIENIIVEVKKEPDAETVEGEEEEPQSAVVEAPNGDLTPE
MILSMMDR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcagttgaagcaatcatggaggagtctgaaaccttcatcaaaggaaaa
gagagaaaaacgtatcagagacgccgggaagggggccaggatgaggatgcttgccatata
tcccagacccaggcggatgggagtgaagtggttcaggaggtaaacagcagtgtccagatg
gtcatgatggaacagctggaccctaccttgcttcagatgaagactgaagtcatggagggt
acagtacctcaggaagctgatgctactgtggatgacacacaaattataacacttcaagtt
gttaatatggaagaacaacctataaaccttggggagcttcagctcgttcaggtccctgta
ccagtaacggtgcctgtggccaccacttctgtagaagaactgcagggggcttatgagaat
gaggtctctaaagaaggcctgcccgaaggcgagcccatgatttgtcacacgttacctttg
cctgaaggtttccaggtggtaaaagtaggtgccaatggtgaggttgagacattagagcaa
ggggagctgcagccccaggaagatcccaattggcagaaagacccagactatcagccgcct
gccaaaaagacaaaaaaaaccaaaaagagcaaacttcgttacacagaggagggcaaagac
gtggatgtttctgtgtatgactttgaagaagagcagcaagagggtttgttatcagaagtc
aatgcagagaaggttgttggtaacatgaagcctccaaagccaacaaaaatcaaaaagaaa
ggtgtaaaaaagacattccagtgtgaactgtgcagttatacatgtccacgacgttcaaat
ttggatcgacacatgaaaagtcatactgatgaaagaccacataagtgccatctctgtggc
agagctttccgcacagtcaccttgctgaggaaccacctaaatactcacacaggtactcgt
cctcataagtgcccagactgcgacatggcctttgtaaccagtggagaattagtgcggcat
cgacgctataaacacacccatgagaaacccttcaagtgttccatgtgtgattatgctagt
gttgaggtcagcaagttgaaacgtcatattcgctctcacactggagagcgtccattccag
tgtagcttgtgcagttatgccagcagggacacgtacaagctgaaaagacacatgcgaacc
cattccggtgaaaagccgtatgaatgttatatctgtcatgctcggtttacccagagtggc
acaatgaaaatgcacatcttacagaagcacacggagaatgtggccaagtttcactgtcca
cattgtgacactgtcatagccagaaaaagtgatttgggtgtccatttgcgaaagcagcat
tcctacatcgagcagggcaaaaaatgtcgttattgtgacgctgtgtttcacgagcggtat
gccctcattcagcatcaaaaatcccacaaaaatgagaagcgtttcaagtgtgaccagtgc
gactatgcatgcagacaggaacggcacatgataatgcacaaacggacacatactggagag
aagccctatgcctgcagtcactgcgacaagaccttccgccagaagcagcttttggatatg
catttcaaacgctatcatgaccccaactttgtccctgctgcttttgtctgttctaagtgt
ggtaaaacatttacacgccggaacacaatggcaaggcatgctgacaactgtactggtcta
gatggtatagatggagaaaatggaggtgaaaccaagaaaggcaagcgtgggaggaaaaga
aagatgcgttctaaaaaagaggagtcatctgatagtgaagaaaatgctgaaccagacctg
gatgacaatgaagatgaggaagaaactgccgttgaaattgaagccgaaccagaagttcag
cctgtgactccaaccccaccaccggccaaaaagcgaagagggaggccgccgggcaaggcc
agccagcccaagcaagcccagcctacagcaatcattcaggttgaagaccagaacactggt
gcaattgaaaacattatagtggaagtcaaaaaagagcctgatgcagaaacagtagaaggt
gaagaagaagagccccagtctgctgtggtggaagctcccaatggagatctcactccagag
atgattctgagcatgatggaccggtga
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integrated database retrieval system
