Trichosurus vulpecula (common brushtail): 118842040
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Entry
118842040 CDS
T10126
Name
(RefSeq) protocadherin alpha-8-like
KO
K16493
protocadherin alpha
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118842040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118842040
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvp04515
]
118842040
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
118842040
Cell adhesion molecules [BR:
tvp04515
]
Cadherins
Protocadherins
118842040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_C_2
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
118842040
NCBI-ProteinID:
XP_036605609
LinkDB
All DBs
Position
3:49301646..49304066
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AA seq
806 aa
AA seq
DB search
MVFSWGGVLGAQQLLFLFLLYTSWEMGSGQVHYSLPEEAKHGTFVGRIAQDLGLEVGELV
SRLFRVVSKGSRDYLEVNVQNGILFVNSRIDREELCGRNLICSIHLEVIVEKPLQVFHVE
VEIKDINDNPPLFPAKEQKLFIPESRLLDSRFPVEGASDPDIGSNALLTYRLSTNDYFIL
EVKSKNDQSKLVELVLKKPLDREEIPEHHLTVMATDGGKPEFTGTVQLLITVLDVNDNAP
TFERSEYEVKIVENAAHETLVIRLNASDADEGINREILYSFNSLSPPVIKDNFHINPDTG
EISVQGHLDFEDVNSYEIRVDATDKGTPLLIGHCTVLVEVLDANDNIPNVAVTSLLLPVR
EDAPPGTVIASIRVSDRDSGANGQVTCSLSPPGPFTLVSTFRNYYSLVLEGSVDRERVPA
YELVVTARDGGKPALWATASVSVAIGDVNDNAPAFEQPVYTVFVKENNPPGSHIFTVSAS
DPDAQENALVSYSLVERRVGERPLSSYVSVHSESGKVYALQPLDHEELELLQFQVSARDA
GFPPLGSNVSLQVFVLDENDNSPVVLPPHSGSGAGGVPGTQLVSQSVTAGHVVAKIRAVD
ADSGYNAWLSYELQPESGVGRSPFRVGLYTGEVSLTRALEESDGPRQTLLVLVKDHGEPA
LSTTATVYVSMAENGQTSKPFSGASGIAAKAGVGKETALVDVNVYLIIAICSVSSLLVLS
LLLYVALRCSAPPQASYGSGKPTLVCSSEMGSWSYSQQRRQVCSGEGAAKKDLMAFSPNL
PPCPVSGERGQKQEADLDSSGKVGDH
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttcctggggaggcgtcttgggagctcagcagttgctgttcttattcctgctc
tacacgtcctgggagatggggagtggccaggtccattactcgctgccggaagaagcaaaa
cacggtacgtttgtgggacgaatcgcgcaggacctgggtctggaggtcggggagctggtg
tcgaggctgttccgggtggtgtccaagggcagcagggactacctggaggtaaatgtgcag
aatggcattttgtttgtgaattctcggatcgaccgggaggagctgtgcggacgaaacctg
atttgtagcatccaccttgaggtgatcgtggagaagccgctgcaggttttccatgtggag
gtggagatcaaggacattaatgacaacccacccttgttcccagcgaaggaacaaaaactc
tttattcccgaatccaggttgctggactcaaggtttcctgtagagggagcttctgaccca
gatattggatcaaatgccttacttacttataggctcagcaccaacgattactttattcta
gaagtaaaatcaaagaatgaccaaagtaaattggttgaactagtgcttaaaaaaccgctg
gacagagaggaaattcctgaacaccacttgacggtgatggccaccgatgggggcaaacct
gaattcaccggcacagtgcagctgctcatcacagtcctggatgtgaacgataacgccccc
acttttgaacgatctgaatacgaagtgaagatagtagaaaatgcagcccacgaaacttta
gtgatcagactgaatgcctccgatgcagacgagggcatcaatcgggagattttatactct
tttaatagtctatcaccacctgtgattaaagataactttcatataaatccagatacagga
gaaatttcagtccaaggtcatctagattttgaagatgttaattcctatgaaattcgagtt
gatgcgacagacaaagggactcccttattgattggtcattgcacagtcttggtggaagtc
ctggacgccaatgataatatccccaatgtcgcagtgacgtcgttgttgcttccagtcaga
gaggatgcgcctccagggacagtcattgcctcaatccgggtgtctgaccgagactctggc
gccaacgggcaggtgacttgctctctgtcaccccctgggcccttcacgctggtgtccacc
ttccgaaattactactcactggtactggaaggttctgtggaccgcgagagagtgccggct
tatgagcttgtggtgactgcgagggacggcgggaagccagctctttgggccactgccagc
gtgtctgtggccatcggagacgtgaacgataacgcgccagccttcgagcagcctgtgtac
actgtgtttgtgaaggagaacaacccaccgggcagtcacatcttcacagtgtcggcgtct
gacccggacgcgcaagagaacgcgctggtgtcttactcactggtggagaggcgggttggg
gagcgtccgctgtccagctacgtgtctgtgcactcggagagcggcaaagtgtacgccttg
cagcccctggaccacgaggagctggagctgctgcagttccaggtgagcgcccgcgacgca
ggcttccctcccctgggcagcaacgtgagcctgcaagtgtttgttctcgatgaaaacgac
aactctccggtggttctgccccctcactcagggtcgggagcgggtggggtcccaggaacc
cagctggtatcccagtcggtgacagcaggccacgtggtggccaagatccgagcagttgac
gcggattctggttacaatgcctggctgtcttatgagttgcagccggagtcgggcgttggt
cgcagcccctttcgcgtggggctgtacactggtgaggtcagcctaacacgagctctggag
gaatctgacgggccgaggcagacgctgctggtgctggtgaaagatcacggagagccagcc
ctgtctaccacagccactgtgtatgtctcaatggcggagaatggacagacttcaaagcct
ttttcaggggcttccgggatcgcggcaaaggctggcgtgggaaaagagacagcgctggtg
gatgtgaatgtttatttgatcatcgccatctgctcagtgtccagcctgttggtgctgagt
ctactgttgtatgtggcacttcggtgctccgctcctccacaggcctcgtatgggtctggc
aagccgacattggtgtgctcaagtgaaatggggagttggtcttattctcagcagcggcgg
caggtgtgctctggagaaggggcggccaagaaagacctcatggccttcagccctaacctc
cctccgtgtcctgtttctggggaaagaggccaaaagcaggaggcagacttggatagctca
gggaaggtgggtgaccattga
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