Trichosurus vulpecula (common brushtail): 118842085
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Entry
118842085 CDS
T10126
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvp03000
]
118842085 (SOX30)
Transcription factors [BR:
tvp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118842085 (SOX30)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
118842085
NCBI-ProteinID:
XP_036605633
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Position
3:complement(67916826..67939914)
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AA seq
839 aa
AA seq
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MERARPEPPPPQPQPPPPPPPPRQLPRGSLPRPLRPALAPLLSQLPAEGAPCRQPAEPLQ
PPPQSPPAPRPRSPSPCQAPGDQPSSLHPHSGAGGPPPRGPAPTVPRLLLQVKAEQPPPP
PPPPPPPPPPSILLLHPTPAAEEAATPPALSSHPSAATAASGPSRLLHVKSEQVLLLPPT
LVSGEGAACRGEQLPPPSQHIPASRVLQVKAEKQELLSAREGAGQELLGRRGAEGGHRAA
RAGKGEGPGPATDSRRVEEKKGSKAEAEESRREMSKNNGESKSLGSVREGAIKTEEPDRM
PEDGRHGKDAAQVKPPASNGLVPSNKDVILAQPPSGFGPHSQDLRIPLTLHTVPSGARIQ
FQGPPPSELIRLTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRN
GHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIK
EKHREEFPGWVYQPRPGKRKRFPLSVSTVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSL
QNTITHPVGEAPPTIQLPTPPVQRPSPITLFQPSVASTAQVAVPAPSLPLRPALPPQRFA
GPSQTDTHRLHSGANRSVKRPTPVSLESTSRNPTSASTAHARFAPSTIQPPKEYPSVSTC
PRSAPIPQAPPIPHPHVYQPSPIGHPATLFGAPPRFSFHHPYFLPGPHYFPSSTCPYSRP
PFGYGNFPSSMPECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESLDGA
SYYNSHSHSGEEYLNPMPQLDIGALENVFTAPASTPSSIQQVNVTDSDEEEEEKVLRDL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggagagagcccggccggagccgccgccgccgcagccgcagccgccgccgccgccgccg
ccgccccgccaactgccgcgggggtccctgccgcgcccgctccgcccggccctcgccccg
ctgctctcgcagcttccggccgagggcgccccctgccggcagcccgccgagccccttcag
ccgccgcctcagtccccgccggctccccggccccgaagcccctccccgtgccaagccccc
ggggatcagccctcctcgctgcatccccactccggagcgggcgggccccctcctcgaggc
ccggcccccaccgtcccccggctgctcctgcaggtgaaggcggagcagcccccgcctccc
ccgccgcctccgccgcctccccctcctccttccatcctgctcttgcatcctacccctgcc
gcagaggaggctgcgacgcccccggccctgtcttcccacccctccgctgccactgcggcc
tctggcccgtcccggctgttgcacgtgaagtccgagcaggtcctgctcttgccccctacc
ctggtgtccggggagggtgcagcttgtaggggcgagcagctgccgcctccgtcccagcac
atccctgcgagcagggtgctgcaggtgaaggctgagaagcaggagctgctgtcagccagg
gaaggagcagggcaggagctcctgggaagaaggggggctgagggtggccacagggctgcc
agagcgggcaagggcgaaggtccgggcccagccactgacagccgcagggtggaggagaag
aagggcagcaaggcagaggcagaggagagcaggcgggagatgtccaaaaacaatggggag
agcaagagccttgggtcggtgagagaaggagccataaaaactgaggagcctgacaggatg
cctgaggacggcaggcatggcaaagatgctgcacaagtgaagccgcctgcatccaatggc
ctggtcccttccaacaaggatgtcattttggctcagcctcccagcggatttggcccccat
tcacaagatctgaggatccctttgactcttcatactgtaccctctggggccagaatccaa
tttcagggacctccaccttcagagctgatacgattgactaaggtgcctctgacaccagtg
cctataaaaatgcaatccttactggagccttcagtaaaaattgaaaccaaagatgtccca
ctcaccgtgcttccctcagatgcaggaatacctgatactcccttcagtaaagacagaaat
ggccatgtgaagcgacccatgaatgcatttatggtttgggcaagaatccatcggccagca
ctagccaaagctaacccagcagccaacaatgcagaaatcagtgtccaacttggattagag
tggaacaaacttagtgaagaacaaaagaaaccttattatgatgaagcacaaaaaattaaa
gaaaagcacagagaagaatttcctggttgggtttatcaaccacgtccaggcaagcgaaaa
cgcttccccctaagtgtgtccactgtgttttctggtactacgcagaatatcatctctaca
aatccaacaacaatttatccttatcgctcacctacatactctgtggttattcccagcctg
cagaatactatcactcatccagttggtgaagccccacctactatccagctacccacgcct
ccagtccagcgtccaagccctattacactcttccagccaagcgttgccagcactgctcag
gtggccgtcccggctccaagcttgcctcttcgtccagctcttccaccacagcgctttgct
ggacccagtcaaacggacactcatcgtctgcattcgggagctaaccgctctgtgaaaaga
ccgaccccagtctctttggagagtaccagtagaaatccaactagtgcaagtactgctcat
gccagatttgccccctctaccattcagcccccgaaggagtaccccagcgtttctacttgt
ccccgaagtgcaccaatccctcaggctccacccattccacatcctcatgtctatcaaccc
tctcccattggccacccagctacattatttggtgcacctcctcgattctcctttcatcac
ccttacttcttacctggacctcactacttcccatcaagcacgtgtccttatagtcgtcct
ccctttggctatggaaatttcccaagttcaatgccagaatgccttggctattatgaagat
aggtaccaaaagcatgaggctatgttttctgccttaaatagagactatcccttcagagac
tacccagatgaacgtacacacagtgaagattctcgaagctgtgagagcctggatggagcc
tcttactataacagccatagccatagtggggaggaatatttaaaccccatgcctcaactg
gacattggagccttagagaatgtattcacagctcctgcatctactccctctagcatccag
caggttaatgtaactgacagtgatgaggaggaagaagagaaagtgctcagggatttataa
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