Trichosurus vulpecula (common brushtail): 118842981
Help
Entry
118842981 CDS
T10126
Name
(RefSeq) ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03013
Nucleocytoplasmic transport
tvp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118842981
03015 mRNA surveillance pathway
118842981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118842981
Enzymes [BR:
tvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118842981
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118842981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
118842981
NCBI-ProteinID:
XP_036606234
LinkDB
All DBs
Position
3:397904969..397948367
Genome browser
AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSSLHIKEEKIKPDANGIVKTDENSGKTDEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPLNKYPQCLCLSPTYELALQTGKV
IEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPKDCQMLLFSATFEDSVWRFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTAGWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggcggtggacgaacaggaggcggctgccgagtccttg
agcagcttgcatatcaaggaagagaaaatcaaaccagatgccaatggtattgtcaaaact
gatgagaattcagggaagacagatgaagaagagaaagaggacagagctgctcagtccttg
ctcaacaagctgatcagaagcaaccttgtggataacaccaatcaagtggaggtccttcag
cgggatccgaactccccactctattcagtgaagtcttttgaagaacttcggctgaaacca
cagcttctgcagggggtctatgctatgggctttaaccggccatctaagatacaagagaac
gcactacccatgatgcttgccgaacccccacagaacttgattgcccagtctcagtctggt
actggtaaaacagctgccttcgtcctggctatgctcagccaagtggaaccactgaacaaa
tacccccagtgtttgtgcctctcacccacttatgagctggctcttcagacgggaaaggtg
attgaacagatgggcaaattttatccagaacttaagctggcttacgctgtccgaggcaac
aagttagaaagaggccagaagatcagtgagcagattgtaattggcacccctggcactgtt
ttggattggtgctccaagctgaagttcattgaccccaaaaagatcaaggtgtttgttctg
gatgaagctgacgtgatgatagccacccaaggccatcaggatcagagtatccgcatccag
aggatgctgcctaaggattgccagatgctgcttttctctgccaccttcgaagattctgtg
tggaggtttgctcagaaggttgtcccagacccaaacatcatcaaactgaagcgagaagag
gaaacattagataccattaagcagtattacgttctgtgcaataaccgggatgagaagttc
caggcactttgtaatctctatggggctatcaccattgcacaagccatgatcttctgtcat
acccgcaaaacagctggttggctggcagctgaactgtccaaagaaggccaccaggtggcc
ctcctgagtggcgaaatgatggtggaacagagagctgctgtgattgagcgtttccgagag
ggcaaggagaaagtgttggtgactaccaatgtgtgtgctcgaggaatcgatgttgaacag
gtgtctgtggttatcaactttgacctgccagtggacaaggatgggaatccagacaacgag
acgtaccttcatcggattgggcgcacggggcgctttggcaagcgaggcctggccgtgaac
atggtggacagcaaacacagcatgaacattctcaacagaatccaagaacatttcaataag
aagatagagagactggacaccgatgatctggatgagattgagaaaatagccaactga
DBGET
integrated database retrieval system
