Trichosurus vulpecula (common brushtail): 118843016
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Entry
118843016 CDS
T10126
Symbol
PSMC6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03050
Proteasome
tvp05010
Alzheimer disease
tvp05012
Parkinson disease
tvp05014
Amyotrophic lateral sclerosis
tvp05016
Huntington disease
tvp05017
Spinocerebellar ataxia
tvp05020
Prion disease
tvp05022
Pathways of neurodegeneration - multiple diseases
tvp05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
118843016 (PSMC6)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
118843016 (PSMC6)
09164 Neurodegenerative disease
05010 Alzheimer disease
118843016 (PSMC6)
05012 Parkinson disease
118843016 (PSMC6)
05014 Amyotrophic lateral sclerosis
118843016 (PSMC6)
05016 Huntington disease
118843016 (PSMC6)
05017 Spinocerebellar ataxia
118843016 (PSMC6)
05020 Prion disease
118843016 (PSMC6)
05022 Pathways of neurodegeneration - multiple diseases
118843016 (PSMC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tvp03051
]
118843016 (PSMC6)
Proteasome [BR:
tvp03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
118843016 (PSMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_22
AAA_5
RuvB_N
PRS7_OB
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_11
TIP49
RNA_helicase
AAA_33
TPR_MLP1_2
AAA_3
NPHP3_N
Csa3_N
AAA_18
Mg_chelatase
bpMoxR
DUF3829_2nd
AAA_28
DUF5906
AAA_lid_PRS2_C
TsaE
AAA_24
NACHT
ATPase
AAA_25
Occludin_ELL
AAA_17
ATPase_2
Parvo_NS1
IstB_IS21
DUF4140
Med4
Motif
Other DBs
NCBI-GeneID:
118843016
NCBI-ProteinID:
XP_036606283
LinkDB
All DBs
Position
3:42740702..42768437
Genome browser
AA seq
403 aa
AA seq
DB search
MDIPSIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND
LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLT
IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP
PKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQ
PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLD
PALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV
CTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggacattcccagcatcccctatgagaggcgtcttctcatcatggcggacccgagagat
aaggctcttcaggactaccgtaagaagctgcttgagcacaaggagatcgatgggcgcctc
aaagagttaagagaacagttgaaagagcttaccaagcaatatgaaaagtctgaaaatgat
ctgaaggccttacaaagtgttgggcagattgtgggtgaagtgcttaaacaactaacagaa
gaaaaattcattgttaaagcaacaaatggaccaagatatgttgtgggttgtcggcgtcag
cttgacaagagtaagctgaagccagggacaagagttgctctggatatgactacactaact
atcatgagatacttgccaagagaagttgatccactggtttacaacatgtctcatgaagac
cctgggaacgtttcttattctgagattggagggctatctgaacaaatcagagaattaaga
gaggtaatagaattgccccttacaaaccctgagttattccagcgtgtaggaataatacct
ccaaaaggttgtttgctgtatggaccaccaggaacaggaaaaacactcttggcaagagct
gttgctagccagctggactgcaattttttaaaggttgtatccagttctattgtagacaag
tacattggggaaagtgctcgtttgatcagagaaatgttcaattatgccagggatcaccaa
ccatgcatcattttcatggatgaaatagatgctattggtggccgtcgtttttctgagggt
acttcagctgatagagaaattcagagaactctaatggagttactgaatcagatggatgga
tttgatactttacacagagtaaaaatgatcatggctacaaacagaccagacacattggat
cctgctttgttgcgtccaggaagattagatagaaaaatacatattgatttaccaaatgaa
caagcaagattagacatattgaagattcatgcaggtcctatcacaaaacatggtgaaata
gattacgaagcaattgtgaagctctcagatggctttaatggagcagatctgagaaatgtt
tgcactgaagcgggtatgtttgcaattcgtgctgatcatgattttgtagtacaggaagat
ttcatgaaagcagtcagaaaagtggctgattctaagaagttggaatctaaactagactat
aaacctgtctaa
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