Trichosurus vulpecula (common brushtail): 118843154
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Entry
118843154 CDS
T10126
Symbol
TNC
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin
KO
K06252
tenascin
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04151
PI3K-Akt signaling pathway
tvp04510
Focal adhesion
tvp04512
ECM-receptor interaction
tvp04518
Integrin signaling
tvp05165
Human papillomavirus infection
tvp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118843154 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118843154 (TNC)
04518 Integrin signaling
118843154 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118843154 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
118843154 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
118843154 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tvp00536
]
118843154 (TNC)
Glycosaminoglycan binding proteins [BR:
tvp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118843154 (TNC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
Fn3_PBP1
DUF7949
EGF
EGF_PEAR1L
NDNF
hEGF
DUF4998
fn3_2
Ig_halo_2
Motif
Other DBs
NCBI-GeneID:
118843154
NCBI-ProteinID:
XP_036606497
LinkDB
All DBs
Position
3:complement(116324641..116434226)
Genome browser
AA seq
2469 aa
AA seq
DB search
MGPLTQVLAYTIIALLYHPTQAGVLKRVIRHKRQSGINATLPEENQPVVFNHVYNIKMPV
GSHCSVDLDSASGEKELNPPNELGEHFQEHTLNEENQIVFTHRINIPRRACGCAPAPDIK
DLLSRLEELEGLVSSLREQCTSGAGCCLQPAEGRLDTAPFCSGRGNYSTDSCGCVCEPGW
KGPNCSEPECPGHCNDRGQCIDGQCVCEEGFTGEDCGQLACPSDCNDQGKCVRGACVCFE
GYTGEDCSEELCPVPCSEHGKCMNGQCVCDEGFAGEDCNEPLCLNNCYNRGRCVENECVC
DEGFTGEDCSELICPNDCYDRGRCVNGTCYCESGFTGEDCGQLTCPNDCNHQGRCEEGQC
VCEEGFAGDDCSEKRCPEDCHNHGRCIDGQCECDDGFTGADCGKLKCPRDCSKHGRCVNG
QCVCDEGYTGEDCANRRCLNDCNNRGRCVHGKCVCEQGFTGYDCGDMSCPNDCHHQGRCV
NGMCVCDDGFMGEDCRDLRCPKDCNSRGVCVAGKCECDEGFAGEACGELACLNNCNNRGR
CVNGQCVCNEGFMGRDCSDLRCPNDCNNQGRCVDGKCVCHEGFGGEDCSQLSCLNNCNDW
GQCVGGRCICNEGYTGEDCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLVIYTPTNS
DGLEMQFRVPGDQTSTIIRELEPGVEYFIQVFAILENKKSIPVSARVATYLPAPEGLKFK
AIKETSVEVEWDPLDIAFETWEIIFRNMNKDDGEEITKSLRRPETTYRQTGLAPGQEYEI
SLHIVKNNTRGPGLKKITTTRLDAPSQIEVKDVTDTTALISWSKPLAEIDGIELSYGIKD
VPGDRTTIDLTHDDNQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFVTGLDAPRNLKR
ISQTDNSITLEWKNGKANIDNYRIKFAPISGGDHAEVEVPKSKQATTKTTLTGLRPGTEY
GIGVSAVKDDKESNPATINAATDMDAPRDLQISEPTETTLPLLWKRPLAKFDKYRLTYSS
PKGQQKEIQLPADTTSYVLRGLDPGTEYAIHLVVEKGRHKSKPARVKGSTEEAPEFGNLA
VTDVSWDALKLNWMAADGAYDSFVIQVQEANKLEEVQNLTVSGSLRAVNITGLQAATPYR
ITIYGVIQAYRTSPLTAETSTEGTPKLVELTTTEVSWDSLRLNWTTTDGNYENFVIQVQE
ADRNLTIPGGLRSVHVTGLTPATLYRITIHGVIRGFSTHPLSIQATTEEVPELGNLTVAK
VSWDSLKLNWTAADGAYEIFVIKVQEANNLEEAQNLTVSGKLQSVDVHGLQAETPYTITL
YGVSRNYTTEPLSAEVTTEEAPKLRSLTVSEITWNAFTLNWTAANGPYENFVIWVQEVNH
PEEMHNLTVASALNSLEVTGLKPATPYKITVTGVVGGYHTEPLSTEASTEELPKLGELTV
TNVSWDALRLNWTTAEEAYDSFVIQVQEANKLEEVQNLTVSGSLRAVNITGLQAATPYRV
TIYGVIQTYRTRSLSAEASTAKKQEIGDLKVSSITPDSFDHSWTTTDGAFETFTIEIVAC
NRLLESLEYDISGTLRIAHFSGIFSNADFIVYLSGIAPGVHIQVISMASTTVAEPLLSHL
TVSDITSGSVSLSWKAQEAAFDNFVLEVRNSDLPLDSVVYTVPGALRSSVITDLRASTNY
TVQLHGLIGGQNGQTLMAQATTEPELQVGPLILTNVTPDSFNMSWTTSAGLFAKFVINVS
DSQSLYEPQQHTVSGDTQHAHITGLVDNTGYDISIRGTTWAGDQTKPLTAFVTTETLPLL
ENLTISDINPHGFTVSWMALENAFDSFLVMVVDSGKLLDPQEFTLSGAQRKLELKGLITG
IGYEVMLFGLAQGHQTKPLSAVVFTEAEPEVDNLLVSDATPDGFRLSWTADDGVFDSFVL
KIRDTKKQADPLEIIVPAHERTRDVTGLKEGTVYDIELYGLISGRRSQPINAIATTAMGS
PKEISFSDVTENSATVSWSAPTSQVESFRITYVPIAGGTPSVVTVDGSKTQTGLVRLMPG
VEYLVSIISIKGFEESEPVTGTLTTALDGPSGLVAANITDSEALAMWQPAIATVDNYVIS
YAGDKVPEVTQTVSGNTVEYALNDLEPATEYTLRIFAEKGPQKSSVITTHFTTDLDSPRD
LVATEVQSETALLKWRPPRAPVTGYLLIYESVDGTIKEVILGPDTDTYSLTELSPSTHYT
AKIQALKGPLRSKLIQTIFTTIGLLYPYPKDCSQTMLNGETASGLYTIYLNGDKAQALNV
FCDMTSDGGGWIVFLRRSNGRQDFYQNWRTYATGFGKLKDEFWLGLDNIHKITDQGQYEL
RVDLKDHGETAYAIYDKFSVGDAKSRYKLKVDGYSGTAGDSMAYHNGRSFSTYDKDTDSA
ITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEHSIQFAEMKLRPSNFR
NLEGRRKRA
NT seq
7410 nt
NT seq
+upstream
nt +downstream
nt
atggggcctctaacccaggtgctggcctacaccatcatagctctgttataccaccctact
caagcaggggttcttaagagagtgattcgccacaagcggcagagtggcatcaatgccacc
ctgccagaagagaaccaaccagttgtctttaaccatgtctacaacattaagatgcccgtg
ggttcccactgctcagtagacctagattcagccagtggggagaaagaactgaaccccccc
aacgagctaggagaacatttccaagagcatacacttaatgaggagaatcagatcgtcttc
acacaccgaatcaacatcccccggcgagcatgtggctgtgcaccagctccagacatcaag
gacctgctgagtcggcttgaggaactagaggggctggtgtcttcactacgggagcaatgt
accagtggggctggctgctgtctccaacctgctgaaggtcgactggacacagcacccttc
tgtagtggtcggggcaactacagcacagacagctgtggctgcgtgtgcgaaccgggctgg
aagggacccaactgctctgaaccagaatgcccaggacattgcaacgacaggggtcagtgc
atcgatggacagtgtgtctgtgaggagggcttcactggtgaggactgtggccagctggcc
tgtcccagtgactgcaatgaccaaggcaagtgcgtccgtggcgcctgtgtctgtttcgag
gggtatacaggggaggactgcagcgaggagctgtgccctgtgccctgcagtgagcatggc
aaatgcatgaacgggcaatgcgtttgcgatgagggcttcgctggtgaggactgcaacgag
cctctgtgccttaacaactgctacaaccgcgggcgctgtgtggagaacgagtgtgtgtgt
gacgagggtttcactggtgaggactgtagcgagctcatctgccccaatgattgctatgac
cggggccgctgtgtcaatggaacctgctactgtgagtcaggcttcacaggagaagactgt
gggcaactcacctgccccaatgactgcaaccaccagggccgatgtgaggaagggcagtgc
gtttgtgaggagggatttgctggtgatgactgtagtgaaaagcgctgtcccgaggactgt
cacaaccacggtcgctgcattgacgggcagtgcgagtgtgatgatgggttcacaggggca
gactgtgggaaactcaagtgtccccgggactgcagcaaacacggccgctgtgtcaacggg
cagtgcgtgtgcgatgagggttacacaggggaggattgtgccaaccgccggtgcctcaat
gactgtaacaaccgcgggcgctgcgtgcacgggaagtgcgtgtgcgaacagggtttcacg
ggttatgactgtggagacatgagctgtcccaacgactgccaccatcaaggacgctgtgtg
aatggaatgtgcgtgtgtgatgatggcttcatgggggaagactgccgggacttgcgatgc
cccaaagactgtaacagccggggggtttgcgtggctgggaagtgtgaatgcgatgagggc
ttcgctggggaagcctgcggagagttagcttgcttaaataactgcaataaccggggccgc
tgcgtgaatggacagtgcgtgtgcaacgagggtttcatggggagagactgcagtgaccta
aggtgtccaaacgactgtaacaaccaagggcgctgtgtggacggcaagtgcgtctgccac
gagggatttggaggagaggactgcagtcagctttcctgcctgaacaactgtaacgactgg
ggacagtgcgttggagggcgctgcatctgtaatgaagggtacaccggtgaagactgttca
gaggtatcccctccaaaggacctcatagtgactgaagtgacagaagagactgtaaacctg
gcatgggacaatgaaatgagggtcacggagtacctcgtcatctacacccccacaaactca
gatggcctggaaatgcagttccgtgtccctggggaccagacatccaccatcatccgtgaa
ttagagccaggggtagaatacttcatccaagtctttgctatcctcgagaacaagaaaagc
atccctgtgagcgcaagggtggctacttacttgcctgccccagaaggtttgaaattcaaa
gctatcaaagagacatcagtagaagtggagtgggatcctctagacattgcttttgaaacc
tgggaaattatcttccgcaacatgaacaaagatgatggagaagaaatcaccaaaagcttg
aggaggccagaaacaacttacagacagacgggcctggctccaggacaggagtatgagata
tctctgcatatcgtaaaaaacaacacccggggccctggtctgaagaaaataacaaccaca
cgtctggatgctcctagccagatagaagtaaaggatgtcacggacactactgctctaatc
agctggtctaagcccttagctgaaatcgatggcattgaactctcatacggcatcaaagat
gttccaggtgacagaacaaccattgatctcactcacgatgacaaccagtactccattgga
aacctgaaacccgatacggaatatgaggtgtcccttatctctcgaagaggagatatgtca
agcaacccagccaaagaaacttttgtaacaggtttggatgcccctcggaatctaaagcgc
atctcccagactgacaatagcatcaccttagaatggaagaatggcaaagctaacattgac
aattatcggatcaagtttgcccccatttctggaggagaccatgcagaagttgaggtgccc
aagagcaaacaggccacaaccaaaaccacactcacaggtctgagacctggaactgaatat
ggcattggagtatcagcagtgaaggacgataaggaaagcaatcccgctaccatcaatgct
gccacagatatggatgccccgagggaccttcagatttcagagcctacagaaaccaccttg
cccctgctctggaaacgacccctggccaagtttgacaaataccgcctgacctatagctct
cccaaaggacagcagaaggaaatccaattgccagcagacaccacttcttatgttctgaga
ggtctggatcctggcactgagtatgccatccacctggtggttgagaaaggacggcacaag
agcaaaccagcccgtgtgaaaggctcaacagaggaagcaccagagttcggaaaccttgcc
gtgacagatgttagctgggatgccctcaaactcaactggatggcagcagatggggcttat
gacagctttgtcattcaggtgcaggaggctaacaagttggaggaggttcagaatctcact
gtgtcgggcagcctgagagctgtgaatatcacaggcctccaagctgccaccccctatagg
atcaccatctacggggtgattcaggcctacagaacaagtccccttactgctgaaacctct
acagaaggaactcccaagttggtagagctaaccacgacagaggttagctgggattctctc
agactcaactggaccaccactgatgggaactatgagaactttgtcattcaggtgcaagag
gctgaccggaaccttaccatcccaggaggactgagatctgtgcatgtgactgggctcaca
cctgccaccctttatagaatcaccatccatggggtgattcggggctttagcacacaccct
ctttctattcaagccaccacagaagaggttccagagctggggaacctcacagtggccaag
gttagctgggattccctcaaactcaactggactgcagctgatggggcctatgagatcttt
gtcattaaggtgcaggaggctaacaatttggaggaagcccagaatctcacagtatctggc
aaacttcagtctgttgatgttcatggcctccaggctgaaaccccttacactattaccttg
tatggcgtgagcaggaactacaccactgaacccctttctgctgaagtcaccacagaggag
gcacctaagctcagaagcttaacagtttcagaaattacctggaatgccttcacactcaat
tggactgcagcaaatgggccctacgagaactttgtcatttgggtgcaagaagttaatcac
cctgaagaaatgcacaatctcacagtggctagtgcactgaactctctggaagtgacaggg
ctcaagccagccaccccttacaaaatcaccgtcactggtgtggtgggaggctaccacaca
gagcctctttctactgaagcctccacagaggagctccctaaactgggagagttaactgtg
acaaatgttagctgggatgccctcagactcaactggaccacagcagaggaagcctatgac
agctttgtcattcaggtgcaggaggctaacaagttggaagaggttcagaatctcacagtg
tctggcagcctgagagctgtgaatatcacaggcctccaagctgccaccccctatagagtc
accatctatggggtgattcagacctacagaacaagatccctttctgctgaagcttccaca
gcaaagaaacaagaaattggggacttaaaggtttccagcattactcctgatagttttgac
cactcctggacaacaacagatggagcttttgagacatttaccattgaaattgttgcttgt
aataggttgttggagtctttggaatatgatatctctggcactttaaggattgctcatttc
tcagggattttctctaatgctgactttattgtctacctctctgggatagcacctggtgtc
catattcaagtcataagtatggcatctacaacagtagccgaacctcttcttagccatctc
actgtctcagacattacctcgggcagtgtatccctctcgtggaaagctcaggaggcagcc
tttgataactttgttttagaagttaggaattctgacctccctctggactctgtggtctac
acagtgcctggggccttgagaagctctgtaatcaccgaccttagagcttccactaattac
actgtccaacttcatgggctgattggcgggcagaatggtcagaccctgatggcccaggca
accacagaaccagagctacaggtgggcccgctaattcttaccaatgttacccccgacagc
ttcaacatgtcatggaccacaagtgctgggctctttgcaaagtttgtcatcaatgttagc
gattctcagtctctgtatgaaccccagcagcacacagtctcaggagacacgcagcacgct
cacatcacaggcttggtagataatactggctatgacattagcattaggggaacgacgtgg
gctggtgaccagaccaagccactcactgcctttgtgacgacagagaccctgcccctactg
gaaaacttaaccatttccgacattaatccccatgggttcacagtttcctggatggcattg
gagaatgcctttgacagctttctagtaatggtggtggattctggcaagctgctggacccc
caggagttcacactttcaggagcccagaggaaactggagcttaaaggcctcataactggc
attggctatgaggttatgcttttcggcttggcccaagggcaccaaacaaagcccttgagt
gctgtggttttcacagaagcagaaccagaagtcgacaaccttctggtttcagatgccacc
ccagacggtttccgtctatcttggacggcagatgacggggtcttcgacagttttgttctt
aaaatcagggatactaaaaagcaggctgatccactggaaataatcgtaccagcccacgag
cgtaccagggacgtaacaggtctcaaagagggaacagtatatgatattgaactctatgga
ttaatcagtggacggcgatcccagccaatcaatgccattgcaaccacagccatgggatca
ccaaaagaaatctccttctccgacgtcactgaaaactctgccactgttagctggtcggcg
cccacatcacaggtggagagcttccggatcacatatgttcccattgcaggaggaacacct
tcagtggtgacagtggatggaagcaagactcaaactgggctggtgagactgatgcctgga
gtggaataccttgtcagtatcatctcaatcaagggctttgaggaaagtgagcctgtgaca
ggaactctcacaacagctctggatggcccatcaggcttggtagcagctaatatcaccgac
tctgaagccctggccatgtggcagccagccattgctacagtggacaactacgtcatctcc
tacgctggggacaaagtgccagaagtgactcaaacagtatctgggaacacagtggaatat
gctttgaatgaccttgagcctgcaacagagtatacgctaaggatctttgcagagaagggg
ccccagaaaagttctgtgatcaccactcatttcacaacagacctagattctccaagagat
ttggtggcaactgaggttcaatcagaaactgcactattaaaatggaggcctcctcgtgca
cctgttactgggtatctcctcatctatgaatctgtggatggaaccataaaggaagtcatc
ttgggacctgacacagatacctacagcctcacagagctgagcccatccacacactataca
gccaagatccaggccttgaagggacccctgaggagtaaactcattcagaccattttcaca
acaattggactcctctacccatatcccaaggactgttcacaaacaatgctgaatggtgaa
acagcctctggcctctacactatctatctgaatggagataaggcccaggcactaaatgtc
ttctgcgacatgacctctgatggaggtggatggattgtatttttgagacgtagtaatgga
cgtcaagatttctaccagaattggaggacctatgctactggtttcgggaaactcaaagat
gaattttggcttgggctggataacattcacaaaatcactgaccaggggcagtatgaatta
agggtggacctcaaggatcatggtgagacagcttatgccatctatgataagttcagcgtt
ggagatgccaagtcccgctataagctgaaggtggacggttacagtggaacagcaggtgat
tccatggcctaccacaatggtaggtccttctctacatatgacaaggacacagattcagcc
atcacaaattgtgctctgtcctacaagggagctttctggtacaagaattgtcaccgagtc
aaccttatgggccggtatggtgacaacaatcacagtcagggcgttaactggtttcactgg
aagggccatgagcactcaatccagtttgctgaaatgaagctaagacccagcaacttccgg
aacctggaaggcagaaggaaaagggcataa
DBGET
integrated database retrieval system
