Trichosurus vulpecula (common brushtail): 118843285
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Entry
118843285 CDS
T10126
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118843285 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvp04121
]
118843285 (TRIM54)
Ubiquitin system [BR:
tvp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118843285 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
Sina_RING
CoiA_N
DUF349
UvrD_C
GH123_cat
DNA_ligase_A_N
Zn_ribbon_FGT1_2
SpoIISA_toxin
DUF1421
DD_DDX21-DDX50
PHP
FlgN
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
118843285
NCBI-ProteinID:
XP_036606741
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All DBs
Position
3:211141217..211180305
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AA seq
370 aa
AA seq
DB search
MNFAVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPNIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLGQRFETLCAVLEERKAELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELIKKVGDMAKVELAG
RPEPGYESMEQFSVSVDHVAEMLRTIDFQTGKETESQQGEVNCPRLHKKGFWGGRRRGVG
AGRGGWQCRG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcagtgggtttcaagccgctgctgggggatgcacacagcatggataacctg
gagaagcaactcatctgcccgatctgcctggagatgttctccaagccagtggtgatcctg
ccctgccaacacaacctatgccgcaagtgtgccaatgacgtcttccaggcctcaaatcct
ctgtggcaatcccggggttccaccacagtgtcctcagggggacgattccgctgcccatcc
tgtaggcatgaggttgttctggacagacatggtgtctatggactgcagcgcaacctgctg
gtggagaacatcattgacatttacaaacaagaatcttcacggcctctgcattctaaagca
gagcagcacctaatgtgtgaggaacacgaggaggagaagattaacatctattgcctgagc
tgtgaggtgcccacctgctccctctgcaaggtgtttggtgctcacaaagactgtgaggtg
gcaccactacccaatatctacaagcgccagaagagtgagctgagcgatggtattgctatg
ctggtggctggaaatgaccgggtccaggcagtcattactcagatggaagaggtgtgccag
accattgaagacaacagtcgaagacagaagcaactactgggacaaaggtttgagacattg
tgtgcagtgctggaagagagaaaagcagagctgcttcaggccctggcccgggagcaggag
gagaagcttcagcgggttcgagggctcatccgtcaatatggagaccacttagaggcttca
tctaagcttgtggagtctgccattcagtccatggaggagccacaaatggctctctacctc
cagcaggccaaggagctgattaaaaaggttggggacatggcaaaagtggagctggctggg
cgtccagaaccaggatatgaaagcatggaacagttctcagtgagtgtggatcatgtggct
gagatgctgcggacaatcgatttccagactggtaaggaaactgagtcccagcaaggtgaa
gtaaattgcccaaggctgcacaagaaggggttctggggaggaagaagaagaggagttggt
gctggaaggggaggatggcagtgcaggggctga
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integrated database retrieval system
