KEGG   Trichosurus vulpecula (common brushtail): 118843347
Entry
118843347         CDS       T10126                                 
Name
(RefSeq) histone deacetylase 1-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03082  ATP-dependent chromatin remodeling
tvp03083  Polycomb repressive complex
tvp04110  Cell cycle
tvp04213  Longevity regulating pathway - multiple species
tvp04330  Notch signaling pathway
tvp04350  TGF-beta signaling pathway
tvp04613  Neutrophil extracellular trap formation
tvp04919  Thyroid hormone signaling pathway
tvp05016  Huntington disease
tvp05031  Amphetamine addiction
tvp05034  Alcoholism
tvp05165  Human papillomavirus infection
tvp05169  Epstein-Barr virus infection
tvp05200  Pathways in cancer
tvp05202  Transcriptional misregulation in cancer
tvp05203  Viral carcinogenesis
tvp05206  MicroRNAs in cancer
tvp05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118843347
   03083 Polycomb repressive complex
    118843347
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    118843347
   04350 TGF-beta signaling pathway
    118843347
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    118843347
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    118843347
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    118843347
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    118843347
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    118843347
   05202 Transcriptional misregulation in cancer
    118843347
   05206 MicroRNAs in cancer
    118843347
   05203 Viral carcinogenesis
    118843347
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    118843347
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    118843347
   05165 Human papillomavirus infection
    118843347
  09164 Neurodegenerative disease
   05016 Huntington disease
    118843347
  09165 Substance dependence
   05031 Amphetamine addiction
    118843347
   05034 Alcoholism
    118843347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tvp03036]
    118843347
Enzymes [BR:tvp01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     118843347
Chromosome and associated proteins [BR:tvp03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     118843347
   HDAC complexes
    Sin3A-HDAC complex
     118843347
    BRAF-HDAC complex
     118843347
    REST complex
     118843347
    SHIP complex
     118843347
    MiDAC complex
     118843347
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     118843347
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    118843347
  Chromatin remodeling factors
   NuRD complex
    118843347
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 118843347
NCBI-ProteinID: XP_036606845
LinkDB
Position
3:242815920..242817654
AA seq 482 aa
MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAH
ADEMAKYHSDDYIKFLHSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGMGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPLLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQPIPEDGIQEDGGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSANFKKAKRVKMEEEKDREPEEKKEAKEEEKTKEEKPEAKGVKEETK
SA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcactgactcagggcacgaagcgaaaagtctgttactactacgacggggatgttgga
aattactactatgggcagggccacccaatgaaaccccatcgaatccgaatgactcacaac
ttgctactaaactatggactctaccggaagatggaaatctatcggccccacaaagcccat
gcagatgagatggccaagtaccacagcgatgactacattaagtttttgcattctatccgt
cctgataatatgtcagagtacagcaagcagatgcagagatttaacgttggtgaagactgt
cccgtgtttgatggcttatttgagttctgtcagttatccaccggtggatctgtagcaagt
gcggtgaaacttaataaacagcagacggacattgctgtgaactgggctgggggcctgcac
catgctaagaagtctgaagcttctggcttctgctatgtcaacgatattgtgttggccatc
ctggaactgttgaagtaccaccagagggtgctgtacattgacattgacattcaccatggc
gatggcgtggaagaagctttctacaccacagatcgggtcatgacagtgtcctttcataag
tatggagagtacttcccgggaatgggtgacctacgggacattggagctggcaaaggcaaa
tactatgctgtcaactacccgcttcgagatgggattgatgacgaatcttatgaggccatt
ttcaaaccagttatgtcgaaggtgatggagacctttcagcccagtgcagtggtcttgcag
tgtggctctgattccctgtctggagaccgattaggttgtttcaaccttaccattaaaggc
catgccaagtgtgtggaatttgtcaagagcttcaatctgcccttgctgatgctgggaggg
ggtggctacaccatccgcaatgtagccaggtgctggacatatgagacagctgtggccttg
gacacagagatccccaatgaacttccctacaatgattactttgaatactttggcccggat
ttcaaacttcacatcagcccatctaacatgacaaaccagaataccaatgagtatttggag
aagatcaagcagaggttgttcgagaacctccggatgttgccacacgcccctggtgttcag
atgcaacccattcctgaggatgggatacaggaggacggtggggacgaggatgaggaagat
cctgacaagcgcatttcaatatgctcctcagacaagcgaattgcttgtgaggaagagttt
tcagactcagatgaagaaggtgagggtggtcgaaagaactcagccaacttcaagaaagcc
aagagggtcaaaatggaagaggagaaagatcgagagccagaggagaaaaaagaagcaaaa
gaggaggagaagacaaaggaagagaaacctgaagccaaaggggtgaaggaggagaccaag
tctgcctga

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