Trichosurus vulpecula (common brushtail): 118843387
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Entry
118843387 CDS
T10126
Symbol
GABRA6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04080
Neuroactive ligand-receptor interaction
tvp04082
Neuroactive ligand signaling
tvp04519
Cadherin signaling
tvp04723
Retrograde endocannabinoid signaling
tvp04727
GABAergic synapse
tvp04742
Taste transduction
tvp05032
Morphine addiction
tvp05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118843387 (GABRA6)
04082 Neuroactive ligand signaling
118843387 (GABRA6)
04519 Cadherin signaling
118843387 (GABRA6)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
118843387 (GABRA6)
04723 Retrograde endocannabinoid signaling
118843387 (GABRA6)
09157 Sensory system
04742 Taste transduction
118843387 (GABRA6)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
118843387 (GABRA6)
05033 Nicotine addiction
118843387 (GABRA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvp04040
]
118843387 (GABRA6)
Ion channels [BR:
tvp04040
]
Ligand-gated channels
GABA-A
118843387 (GABRA6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
PRIMA1
Motif
Other DBs
NCBI-GeneID:
118843387
NCBI-ProteinID:
XP_036606909
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All DBs
Position
3:72518375..72562498
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AA seq
465 aa
AA seq
DB search
MHCRMPLLLKWLHIIVCLDNALGDSTYEGNLYSKNISRILDNLLDGYDNRLRPGFGGAVT
EVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFRGPSKILSLNNLMVSKIWTPDT
FFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGS
YAYPKSEIIYTWKKGPLYSVEVPQESSSLLQYDLIGQTVSSEIIKSNTGEYVIMTVYFHL
QRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPK
VSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQNQRGKQKVSRTVLPSVTTMPVEDEI
VLCPHSNYNLKKRVNSLTLSKLQSPEVKKVLTRVPNSQLMPDMPLSLPPPPPPPPPPPPP
PAIGGTSKIDQYSRILFPVAFAGFNLVYWIVYLSKDTMEVSSSIE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcaggatgcccttgcttctgaagtggctgcacatcattgtatgcctagacaat
gccctgggtgattctacgtatgaaggaaacctctactcaaagaatatcagcaggatattg
gacaacctgttggatggctatgataacaggcttcgaccgggatttggaggtgctgtcact
gaagtgaaaactgatatttatgtgacgagctttggtcctgtgtctgatgtggagatggaa
tacacgatggatgttttcttccgtcagacatggactgatgagaggctaaagttcaggggc
ccatctaagattctaagtttgaataatttgatggtcagcaaaatctggacacctgatact
ttttttaggaatggaaaaaaatccatagctcacaatatgacaacgccaaacaagctcttc
cgtatcatgcagaatggaactattctctacacaatgagacttaccatcaatgctgactgc
cctatgagactggttaactttcctatggatgggcatgcttgtccactgaagttcgggagc
tatgcttaccccaaaagtgagatcatctatacatggaaaaagggccctctttattctgta
gaagttcctcaagaatcctcgagcctcctacagtatgatctgattggacagactgtgtct
agtgagataataaaatccaatacaggtgaatatgtaatcatgacagtttatttccatttg
caaaggaagatgggatatttcatgatacagatatacactccctgcattatgacagtcatt
ctatctcaggtgtctttctggattaataaggagtctgtgcctgctagaactgttttcgga
attaccactgttttaaccatgaccactttaagtatcagtgctagacattctttgccaaag
gtgtcctatgcgactgccatggattggttcatagctgtgtgttttgcctttgtcttctct
gcccttattgagtttgcagctgtcaattattttaccaatcttcagaaccagagaggaaag
cagaaggtgtccagaacagtgctgccctcagtcacaacgatgccagtggaagatgagatt
gttttgtgtcctcattccaattataatttgaagaagcgagtgaactctctgactctgtca
aaacttcagtcacctgaggtaaagaaagttctcaccagagtacccaactcacagttgatg
cctgacatgccactgtcactaccgccaccaccgccaccaccaccaccaccaccaccacca
ccagccattggtggcacaagtaaaatagaccagtattccagaattctcttccctgtggca
tttgcgggattcaacttggtatactggattgtttacctttctaaagatactatggaagtg
agtagtagcattgaatag
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