KEGG   Trichosurus vulpecula (common brushtail): 118843445
Entry
118843445         CDS       T10126                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03013  Nucleocytoplasmic transport
tvp05014  Amyotrophic lateral sclerosis
tvp05164  Influenza A
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118843445 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    118843445 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    118843445 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvp03019]
    118843445 (RAE1)
   03036 Chromosome and associated proteins [BR:tvp03036]
    118843445 (RAE1)
Messenger RNA biogenesis [BR:tvp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     118843445 (RAE1)
Chromosome and associated proteins [BR:tvp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    118843445 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WD40 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_ACSF4 NBCH_WD40 Beta-prop_WDR41 Beta-prop_Nup120_160 WDR90_beta-prop_4th ExoI_SH3 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 118843445
NCBI-ProteinID: XP_036606986
LinkDB
Position
3:complement(190913753..190937425)
AA seq 368 aa
MSLFGTTSGFGTSGTSMFGSTATDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSPSPMMTLQLPERCYCADVVY
PMAAVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagcttgtttggaacaacctcgggttttggaaccagtgggacaagcatgtttggtagc
acagcaacagataatcacaatcctatgaaggatattgaagttacgtcttctcctgatgac
agtattggatgtctttcttttagcccgcctacattgccaggaaactttcttattgcagga
tcttgggccaatgatgttcgatgttgggaagttcaagataatggacaaactattccaaaa
gcccagcagatgcacacagggcctgtacttgatgtctgttggagtgatgatgggagtaaa
gtatttacagcatcttgtgataaaactgccaaaatgtgggacctcaacagtaaccaggct
atacagattgcacagcatgacgctcctgtgaaaactgtgcattggatcaaagcaccaaac
tatagttgtgtgatgacaggaagctgggataaaactttaaagttttgggacacacgatca
ccaagtcctatgatgacattgcaactgcctgaaagatgttactgtgctgatgtggtctac
cccatggcagctgtagctactgctgagagaggactgatagtttatcagctagagaatcag
ccttctgaattcaggagaatagaatctcctcttaaacatcagcatcgttgtgttgccatt
tttaaagacaaacagaataagcctactggttttgctctgggaagtattgaaggaagagtt
gctattcattatattaatcctccaaatcctgccaaagataacttcacctttaaatgtcat
cgttctaatggaactaatacttcagctcctcaagatatctatgctgtgaatgggatagcg
tttcatcctgttcatggaacccttgcgactgtaggatctgatggcagattcagcttttgg
gacaaagatgcaaggacaaaactaaaaacttcagaacaattagatcagccaatttcagct
tgttgtttcaatcacaatggaaacatatttgcatatgcctctagctatgactggtcaaag
ggacatgaattttataatccccaaaagaaaaattacatttttctacgtaacgcggcagaa
gagttaaagcctagaaataagaagtaa

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