Trichosurus vulpecula (common brushtail): 118843450
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Entry
118843450 CDS
T10126
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118843450 (CHD9)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118843450 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
HTH_CHD1_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
118843450
NCBI-ProteinID:
XP_036606993
LinkDB
All DBs
Position
3:151174421..151368398
Genome browser
AA seq
2917 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEDLSDDAFVQPGPVSLVDELNLGVEFEPLHIDSLNHVQDTQ
TPQKMTDFEQLNQFESLKLHQVNQSFNSPVETVLSPHSQFSCSPVHPPNQSNGLFPDVAD
GSPMWGHQTSVSNQNGSPFHQQGHSHSMQQNKSFVAHPDFALFQVNEQQQQCTSLQSQQN
RNSNNPGQETLSQSKNFMDVNISGPHRVHVTHPSQITSASTSQQPLSIQQFSPTSNASMH
FCGNHQDGNFNGQSPNMTPCSVNNSQQFSSHYSFSSNHISPSNLLQSSTALASSHSTHTL
SDFTGSNAFIAQTGTKQESTPHILNSNSSLSSNNFEMLHSAHPQGNFSSSKLSPVHMNFP
DPVGSASHMGHFSDHVETNGFSSLEDNLLHQVESQTETFTGLDPEDLLQEGLLPQFDDST
FGQDSSSHVLEHDLDQQLPPQLLTQPLDVARTHSQSQVHSWHLSVSNHPHLNDREHSSLQ
RQPPSSKKTDGSGTYAKLQNTQVRAMSEKKQKRKVESESKQEKANRIISEAIAKAKERGE
RNIPRVMSPENFPSVSAEGKEEKKGRRMKSKPKDKESKKTKTCSSTKLKEKTKIGKLIIT
LGKKQKRKNVSSDEMSDAEQIPQRTFRDEDSQLLIQWRVVAQGSWAAARVEKRRSNRQVK
RKKYAEDAEGKQSEEEAKVSVKIKKSSALPAEQPLQLFVENPSEEDAAIVDKILSSRIVK
KEVSPGMMIDAEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFAD
MEEEPFNPDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIE
EFEQLQASRPDSRHLDRPPPNTWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCI
LADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSL
VSRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRL
KNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLK
TEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS
KGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETHNPAAPDFHLQAMIQSAG
KLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAID
RFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVK
VYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYG
AIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNF
WQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRR
PCDRSSGYGRTECFRVEKNLLVYGWGRWREILAHGRFKRQLNEQDVEIICRALLAYCLVH
YRGDEKIKGFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWL
RKYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGVEASDIDVWV
PEPDHSEVPAEWWDLDADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQ
RANDYMDGDVEDPEYKPAPAMFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALT
TRLRRLITAYQRTSKNRQALQIQPAFSVQANVMQPPYEEAALNPKIAAKIERQQRWTRRE
EADFYRVVSTFGVVFDPDRGQFDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPS
KEELVDPSIFIQPITEERASRTLYRIELLRKVREQALRHPQLFDRLKLCQPNPDLPVWWE
CGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQNKVTHSRTSTPLIQQYQMA
LSASPLASQPRLLDTKGNALEDTKVKGESLKEELQSSGEESVSSEEIRTGIKSEPLSPKN
GILPQTAGDQKSTGKVETDRRMVAARTEPLTPNPASKKQRVPKRGSESSSDSDSDSDRSS
CSSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSEESDSEEE
AQKRAEGTTHMKSYDEESVASLSTIQDETQDSFQMNNGTPNSAYIIQGGYMLAASYWPKD
RVMINRLDSICQTVLKGKWPAVRRGYEGSAVASFYTTKLLDSPGAAADAGEPRAPTPPSA
GVREERDQSTQMSKVKKHVREKEFTVKINDEGGLKLTFQKQGLSQKRPFENEDGSLGQQQ
YLARLRELQNASETSLVNFPKSLPVSGTSSQPAIGANGVILDNQPIVKKRRGRRKNVEDV
DILLLNRNKPPNHVTVGITTSQITPGINPALSYTQSQGILDIENPVPVINLKDGTRLAGD
DAPKRKDLEKWLKEHPGYVEDLGAFIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERV
QLINRRNARKVGGAFAPPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMHDRILTGP
VVREEVSRRGRRPKSEIAKATAAAAAATAANVSGSPLLANGLLPGVDLTTLQALQQNLQN
LQSLQVTAGLMGMPASLSGGEVNKNMAAMFPMLLSGMTGLPNLLGMGGLLTKPAESVAEE
KKGSDSKEPDGKKERTESQNSDNVGENSVSSSPSTSSSAALNTAAAASPLALNPLLLSNI
LYPGMLLTPGLNLHIPALSQSNIFDVQNNKNDDLDSTKPVEEKEEDSRVRDQEEKGETEP
SSLNENSTDEGSEKADASSGSESTSSSSEESDSSNED
NT seq
8754 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccaatgatggacttttttgacgatgccaatctttttggtgagaccttagag
gatttgtcagatgatgcctttgtacaaccaggacctgtttcacttgttgatgaattgaac
ttgggtgtagaatttgaacctttgcacatagattcattgaaccatgtccaggatactcag
acaccacagaagatgactgattttgagcagttaaatcagtttgagtcactgaaacttcat
caagttaatcagtcattcaatagcccagttgaaactgtgttatcaccacattctcaattt
agttgttccccagttcaccccccaaatcagtctaatggtttgtttccagatgtagctgat
ggcagtccaatgtggggccatcagactagtgtttcaaatcaaaatgggtctccttttcac
caacaaggacattcacattctatgcagcaaaataaaagctttgtagcacaccctgacttt
gccttatttcaggtcaatgaacaacagcaacagtgcacatcactacagtcacaacaaaac
agaaacagtaataacccagggcaagaaactttaagccaatctaaaaactttatggatgtt
aatatttctggtccacatagagtccatgttacccacccatctcaaattactagtgcatca
acttcacaacaacctctctccatccaacagttttctccaacatcaaatgcctccatgcac
ttctgtggcaatcaccaagatggaaattttaatggacagtctccaaatatgactccttgc
tctgtcaataattcacagcagttttcttctcattattccttctccagtaatcacatatct
ccaagcaatcttcttcagtcctctacagctcttgcatctagtcattcaactcatactttg
tctgattttactggaagcaatgcctttatagctcagacggggaccaagcaggaatccacc
ccgcatatactaaactcaaattcatctttgagttcaaataattttgaaatgttgcattca
gcacatcctcagggtaacttcagcagctcaaaattatctcctgtgcacatgaatttccca
gatcctgttggttctgcttctcacatgggacatttcagtgatcatgtagaaacaaatggt
ttttcatctctagaagataatttacttcatcaagtagagtctcaaactgagacatttaca
ggacttgatccagaagatcttcttcaggagggtctccttccccagtttgatgactcaaca
tttgggcaagatagttcaagtcatgtcttagaacatgaccttgatcaacaacttccccca
cagcttttaacacaacctctggatgtggctcgaactcattctcaaagtcaagttcactcg
tggcatttgtcagtttctaatcatccacacttaaatgacagggaacattcatccttacaa
cgccagcctccttcctctaagaaaactgatggttctgggacatatgctaagttacagaat
acccaggtgagagccatgtctgagaagaagcagaaaagaaaggtggaatcagaaagcaag
caagaaaaagctaatcgtatcatatcagaggcaatagcgaaagcaaaggaacgaggggaa
cgaaacattcctcgagtaatgagccctgaaaactttcccagtgtttcagctgaaggaaag
gaagaaaaaaaaggtagaagaatgaaatctaagccaaaagacaaggaaagcaagaaaaca
aaaacttgttcctcaaccaagttaaaagagaagacaaaaattgggaagctcatcattacg
ttgggtaagaagcaaaaaagaaagaatgtgtcttcagatgaaatgtctgatgctgagcag
attccacaacgtacattcagagatgaggattcccaacttcttatccaatggagagtagtg
gctcaaggctcctgggctgctgcaagagttgagaagagaagatcgaatcgccaagttaaa
aggaaaaagtatgctgaagatgcagaaggaaaacagtcagaagaagaagcaaaagtttct
gtgaaaatcaaaaaaagttcagctttacctgctgagcaacctttgcagttgtttgtggag
aatccgagtgaagaagatgctgcaattgtggacaaaatactgtcttctaggatagtaaag
aaggaagtatcacctggaatgatgattgatgcagaagaattttttgtaaaatacaagaat
tactcctatcttcactgtgagtgggccacagaacaacagcttttaaaagataaaagaata
cagcagaaaatcaaaagattcaaattgagacaagcacaacgagcacattttttcgcagat
atggaagaagaaccttttaaccctgactatgtcgaagtagacagagtgttagaagtttct
ttttgcgaagataaggacactggtgagcctgtaatttactacttggtaaaatggtgctca
ttgccgtatgaagatagtacatgggaactgaaagaggatgtagatcaagcaaaaatagaa
gaatttgaacaactgcaagcctcaaggcctgactctaggcatttggaccgtcctcctccc
aacacttggaaaaaaatagagcaatccagagaatacaaaaacggcaaccagctcagggaa
tatcaactagaaggactcaactggctattgtttaattggtacaataggcgaaactgcatt
ttagctgatgaaatgggtcttggcaaaacaattcagtcaatcacattcctctacgaaata
cttctgaccggcataagggggccttttctgatcattgcgccactttcaactattacaaac
tgggagagagaatttcgcacatggactgatcttaatgttgtggtgtatcatgggagcctg
gttagcaggcagatgatacagcagtatgagatgtacttcagagactcacaggggcgtatt
attagaggagcatacaggttccaggccataatcaccacttttgaaatgattctgggaggc
tgtggagagctcaatgcaattgaatggcgatgtgtgattattgatgaagcacatagatta
aagaataaaaattgcaaactcctagaaggtctgaaactcatgaatctggaacacaaggtg
cttttgactggtacgccacttcagaatacagttgaagaattattcagtcttcttcatttt
cttgagcccttacgatttccctctgaatctactttcatgcaagaatttggggatcttaaa
acagaagaacaggtgcaaaagcttcaagccattttaaaaccaatgatgttgagaagatta
aaagaagatgtagaaaagaagttggcccctaaagaggaaactataattgaagtagaactt
actaatattcagaagaaatattaccgggctatcttggaaaagaattttgcatttttatcc
aaaggagcaggacaagctaatgtacctaatttagttaacactatgatggaactcagaaaa
tgctgtaaccacccttatcttatcaaaggtgctgaggagaaaatacttggggaatttaaa
gaaacacataacccagctgctcctgactttcatcttcaagcaatgatccagtctgctggc
aaattagtcctcattgataagcttcttccaaaaatgaaagcaggtggacataaagtgctc
atcttctcccagatggtgcgctgccttgacattttggaggactatcttatacataagagg
tatctgtatgagcgaattgatggaagagtccgaggaaaccttcgacaggctgccatagat
cggtttagtaaacctgactcagacagatttgtatttcttttgtgcactcgagctggtggg
ctgggcattaatttaactgcagctgatacatgcatcatttttgattctgactggaatcct
caaaatgacctccaggcccaagctcgatgtcacaggattggtcaaaacaaagctgtcaaa
gtctacagattaataactcgtaactcatatgagagagagatgttcgaccgggcaagccta
aaattgggtctagataaggctgtattacagagcatgagtggaagagaaaatagtgttggt
ggtattcagcaactgtccaaaaaggaaatagaagatctacttcgaaggggtgcatatggt
gccattatggatgaagaagatgagggttctaaattctgcgaagaggatattgatcaaatt
ttacagcgtcgcacaaaaacaatcacaattgaatcagaaggaagaggttcaacatttgcc
aaggcaagttttgtggcatctggaaaccggactgatatttccttagatgatcccaacttc
tggcagaaatgggcaaaaaaagcagaaattgatatagatgccatcagtggcagaaacagc
ttagttattgacaccccaaggattagaaaacaaacaagaccctttagtgccacgaaagat
gaattggctgaattgtctgaagttgaaagcgaaggagatgataagcccaaactccgtaga
ccatgtgaccgttccagtggttatggaaggacagaatgctttcgagtggagaaaaacctg
ctagtttatgggtggggtcgatggagagagattctagctcatggtcgatttaaaagacaa
ctaaatgaacaagatgtggagatcatttgccgagcccttttagcatattgtcttgttcac
taccgaggagatgagaagattaaaggtttcatatgggatcttattacccctacagaggat
gggcaaacaagagaattgcaaaatcatctgggcctgtcagctcctgtccctaggggccga
aaagggaagaaagtgaaaactcaagcaagcacatttgatatccacaaagcagaatggctt
cgaaagtataatcctgagcatctgctacaagacgaaggctataaaaaacacataaaacat
cattgtaataaggttttgcttcgagtgcggatgctgtattatttaaaacaagaagtcatt
ggtaatgagttccagaaagtatttgatggagttgaagcaagtgacattgatgtttgggtc
cctgagccagaccattctgaagtccctgctgagtggtgggatcttgatgcagataaatct
ctccttattggagtttttaaacatggttatgaaaagtacaacacaatcagagcagaccca
gcgctgtgttttttggaacgagtaggaaaacctgatgagaaagcagttgctgctgaacag
agagcaaatgattacatggatggggatgtggaagacccagaatataaaccagctccagct
atgtttaaagatgacatagaggatgatgtttcatcaccaggagatcttgtaatagcagat
ggagatggccaaatgatggaaggagacaagatttattggcctactcagtctgccttaacc
acacgcttgcgccgcctcataactgcgtatcagcggactagtaaaaatagacaagccctg
caaatccagccagcgttctcagtacaagccaacgtgatgcagcctccttatgaagaagct
gctcttaaccctaaaatagctgccaaaattgaaagacagcagagatggacaagaagagag
gaagctgacttttatagagttgtatctacttttggagtggtatttgatcctgacagagga
caatttgactggacaaaatttagagccatggctaggctgcacaagaaaactgatgagagt
ttggagaagtacttatatgcttttatgtccatgtgcaggagagtttgccgtcttccttcc
aaagaagaattggtggacccaagtatttttatccagcctatcacagaggagcgtgcttct
aggacattgtatcgaattgagcttctgaggaaagtacgagaacaggctctccgacatcca
caactatttgaccgcttaaagctttgccagccaaatccagatttgccagtttggtgggag
tgtggcactcatgatagagatttgcttattggagctgctaagcacggggttagcaggaca
gactatcacattcttcgtgatcctgaactttcatttatggcagctcagaggaactacagt
caaaataaagtgactcattcaagaacttctaccccacttatacaacagtatcaaatggca
ctatctgcctcccctctggcttctcagccaaggttactggatactaaagggaatgctctt
gaggatacaaaagttaaaggtgaaagccttaaagaggagcttcagtcttctggagaggaa
tctgtgtcttctgaagaaatcagaacaggaataaaatctgaacctttaagcccaaagaat
ggtattttgccacaaactgctggagatcagaagtctactgggaaggttgaaacagatagg
cgcatggttgcagccaggacagagccccttaccccaaatccagcttccaagaaacagcga
gtgcccaaaaggggatctgagtccagctctgattcagactctgattctgacagatcatct
tgttcttctagatcatcatcttcctcttcttcttcttcttcctcttgttcccactctaga
tcaggatctagttcttcatcatcttcatcttgttcttcagcatcttcttcatcctcctct
tcctcttcctcttcttcctcttcatcatcctcatcagaagaaagtgatagtgaagaagaa
gcccaaaagcgagcagaaggcaccactcacatgaaatcatatgatgaagagagtgttgca
tcactgagcactatacaagatgagacccaggatagttttcagatgaacaacggaactcca
aactctgcttatatcatacaaggtggatacatgctggctgcttcttattggcctaaggat
cgggtaatgatcaatcggttagacagcatttgtcaaacggtcctgaaaggaaagtggcca
gcagtccggagaggttatgagggcagtgcagtggcatctttctacacgaccaagcttctg
gacagccccggtgctgctgctgatgctggcgagccccgagcgccgactcccccaagtgca
ggggtgagagaagagcgtgaccagtccacacagatgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaagttgacgtttcaaaag
caaggactttctcagaaaaggccatttgaaaatgaagatggttcacttggacagcagcag
tacctggcacggcttcgggaacttcagaatgcttcagagaccagcctagtcaattttcca
aagtccctgccagtatcaggtacttctagtcagccagcaattggtgccaatggagtgata
ttagataaccagcccatagtcaaaaaaaggaggggaagaaggaagaatgtggaagatgtt
gacattcttctattaaatagaaataaaccacctaatcatgttacagtaggcattaccacc
tcacaaattactccagggataaatccagctctgtcttatactcaatctcaagggatactt
gacatagaaaatccagttccagttattaatctgaaagatggaacaagacttgcaggtgat
gatgcacccaaaagaaaggatttagaaaaatggcttaaggagcacccaggttatgtggaa
gacttgggagcctttattcctagaatgcagcttcatgatgggagacctaagcaaaaaaga
catcgctgcagaaaccccaacaaactagatgttaatagtctcactggagaagaacgtgtt
cagttgattaacagaagaaatgccagaaaggtaggaggagcatttgctcctcctttgaaa
gatttatgtagattcttgaaagaaaattctgaatatggagtcgctcctgaatggggagat
gttgttaaacagtctgggtttcttcctgaaagcatgcatgaccgtattcttactggtcct
gtcgtccgagaagaagtaagcagacgggggagaaggcctaaaagtgagattgccaaggca
acagcagcagcggcagctgcaacagcagcaaatgtgtctggcagtcctttgctagccaat
ggattgctcccaggtgtggatctgacaactcttcaggccttacaacaaaatctgcaaaac
cttcagtcactacaagtaactgcagggttgatggggatgcctgccagcctatctggtgga
gaagttaataaaaacatggctgctatgttcccaatgcttttgtcagggatgacaggatta
ccaaatttactaggcatgggaggactcctgacaaaacctgcagaatctgtggcagaagag
aaaaagggcagtgactccaaggagccagatggaaaaaaagaaaggacagaaagccaaaac
tctgacaatgtcggggaaaactctgtatcgagttctccttcaacatcctcttctgctgca
ttaaatactgctgcagctgccagccccttagctcttaacccattactgttgtccaatata
ctttatccagggatgcttctcactccaggccttaatcttcatatcccagctttgtcccag
tccaatatttttgatgtacagaacaacaaaaatgatgacctagactcaaccaagcctgta
gaggaaaaggaggaagattccagggttagagatcaggaagaaaaaggggaaactgaacca
agttctctcaatgaaaacagcacagatgagggttcagaaaaagcagatgcttcatctgga
tctgagagtacatcatcatcatctgaggagtcagattctagtaatgaagactga
DBGET
integrated database retrieval system
