Trichosurus vulpecula (common brushtail): 118843541
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Entry
118843541 CDS
T10126
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp01524
Platinum drug resistance
tvp03430
Mismatch repair
tvp05200
Pathways in cancer
tvp05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118843541 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118843541 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
118843541 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
118843541 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118843541 (MSH2)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
118843541 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
YidB
Motif
Other DBs
NCBI-GeneID:
118843541
NCBI-ProteinID:
XP_036607115
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All DBs
Position
3:complement(344679488..344748780)
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AA seq
934 aa
AA seq
DB search
MALQPKEVLAMDSQAECSFIRFFQAMQPKPLTTVRIFDRGDYYTAHGDDALLAAREVFKT
QAVIKYIGVTGAKKLESVVLSKMNFESFAKDLLLVRQYRVEVYKNKAGSKATKENDWHVA
FKASPGNLSQFEEVLFGSSDMSCSIGGVGIKLSVVDGQRLVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPAGETAGDMGKLRQVIERGGILITEKKKTDFAAKDIVQD
LNRLLKSKKGDQVNSAVLPEMENQVAISSLSAVIKYLELLSDDTNFGQFELTTFDLNQYM
KLDNAAVRALNLFQGSAEDKSGTQSLAALLNKCKTPQGQRLLNQWIKQPLLDKNRIEERL
NLVEAFVVDAELRQSLQEDLLRRFPDLNRFAKKFQRHAASLQDCYRIYQAINHLPNVIQA
LEKHEGTHQSLLLAVFITPLNDLHSDFSKFQEMIETTLDMNQVENHEFLVKASFDPHLTE
LRESITNLEKKMQASLTNAARELGLEAGKHIKLDSNAQLGYYFRVTCKEEKVLRSNKNFN
TLDVQKNGVKFTNSKLAAFNDEYLKIRDEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGKIILKGSRHACVEVQDEVAFIPNDIYFEKN
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSATVSIVDCILARVGAGDCQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALADQLPTVNNLHVSALTTDETLTMLYQVKKGVCDQSFGIHVAELANFPKHV
IENAKQKSLELEEFQHFGKPQESDETEPAAKRCYREREQGEKIIQEFLAKVKKLPFAEMS
EEGIRTRLKQLKAEVISQNNSFVNEIISRLKVTP
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcaacccaaggaggtgctggccatggacagccaggccgagtgcagcttcatc
cgcttcttccaggccatgcagccgaagccgctcaccaccgtgcgcatcttcgaccgggga
gattactacacggcgcacggcgatgacgccctattggccgcccgggaggtgttcaagacc
caggcggtcatcaaatatatcggggtgaccggtgcaaaaaaactggaaagtgttgtgctt
agtaaaatgaattttgaatcttttgcgaaagacctcctcttggttcgtcagtatagagtt
gaagtttataagaataaagctgggagtaaggccaccaaggagaatgactggcatgtggca
ttcaaggcttcaccaggcaatctttctcaatttgaagaagttctctttggcagcagtgat
atgtcatgttccattggtggtgtgggtattaagttatctgttgttgatggccaaagatta
gttggagttggatatgttgactccatacagaggaagctaggactgtgtgagtttccagat
aatgatcagttctccaatctggaagctctgctgattcagattggcccaaaggaatgtgtg
ctaccagcaggtgaaactgctggagacatgggaaaactgagacaggttattgagagagga
ggaattctgatcacagagaagaagaaaactgattttgcagcaaaagatattgttcaggac
ctcaaccgtttgttgaaaagcaaaaagggcgatcaagtgaatagtgctgtattgcctgaa
atggagaatcaggttgcaatttcatcattatcagctgtgattaagtatttagaactttta
tcagatgatacaaactttggacaatttgaactgactacctttgacctcaaccaatatatg
aagctggataatgcagctgtcagagctcttaacctttttcagggctctgctgaagacaaa
agtggtactcagtctcttgctgctttgctgaataagtgcaaaacacctcaaggacaaaga
ctgcttaatcagtggattaagcagccactactggataagaaccggatagaggaaaggtta
aatttagtggaggccttcgtagtagacgcggagctgagacagagtttacaagaagactta
cttcggcgtttcccagatcttaacagattcgccaaaaagtttcagagacatgcagcgagt
ttacaagattgttaccgaatctatcaagccataaaccatcttcccaatgttatacaagca
ctggaaaaacatgaaggaacacaccagtcattgttattggcagtcttcataactcctttg
aatgatcttcattctgatttctccaagtttcaggaaatgatagaaacaaccttagatatg
aatcaggtggaaaaccatgaatttcttgtgaaggcatcctttgatcctcacctgacagag
ttaagagagtcaattactaatctagaaaagaagatgcaggcatctttaacaaatgcagca
agagagctaggcttagaagctggtaaacacattaaactggactccaatgcacaactagga
tattacttccgagtaacctgcaaggaggaaaaagtccttcgtagcaataaaaactttaac
acattagatgtccagaagaatggcgttaagtttaccaacagcaaattggctgccttcaat
gatgagtacctcaaaattagagatgaatatgaggaagcccaggatgccattgttaaagaa
attgtcaacatttcttctggctatgtagaaccaatgcagacactgaatgatgtattagct
caactagatgcagttgtcagttttgctcatgtatcaaatggcgcacctgttccatatgta
cgtccagtcattttggaaaagggacaaggaaaaatcatcttgaaaggttccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcccaatgacatctacttcgagaaaaat
aagcagatgttccacattattactggccccaatatgggaggtaaatcaacatatattcgt
caaactggagtaatagttctgatggctcagattggctgttttgtaccgtgcgactctgca
acagtgtccattgtggattgtatcttggctcgagttggagcaggtgattgccagctgaaa
ggtgtgtctacattcatggcagaaatgctggagacagcttctattctcaggtctgcaacc
aaggattccctgataatcatcgatgagttgggaagagggacttctacctatgatggattt
gggttggcatgggctatttcggagtatattgccactaagataggtgccttctgtatgttt
gctactcattttcatgaactgacagcattggctgaccagttgccaacagtgaataatcta
cacgtttcagcattaactactgatgagacattaactatgctgtatcaagtgaagaaaggt
gtctgtgatcagagttttggaattcatgttgcggagcttgctaattttcctaagcatgta
atagagaatgccaaacaaaagtccctggaactagaggaattccagcattttggaaaacct
caagaatctgatgaaacagaaccagcagccaagagatgctaccgagaaagagagcaaggt
gaaaaaataattcaggaatttctggccaaggtaaagaaattgccctttgcagaaatgtct
gaggaaggcatcagaaccagattaaaacaactgaaggctgaagtgatatcacaaaataac
agttttgtgaatgaaataatttcacggttaaaagttactccatga
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