KEGG   Trichosurus vulpecula (common brushtail): 118843724
Entry
118843724         CDS       T10126                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03320  PPAR signaling pathway
tvp04148  Efferocytosis
tvp04151  PI3K-Akt signaling pathway
tvp04659  Th17 cell differentiation
tvp04919  Thyroid hormone signaling pathway
tvp04920  Adipocytokine signaling pathway
tvp04928  Parathyroid hormone synthesis, secretion and action
tvp04932  Non-alcoholic fatty liver disease
tvp04976  Bile secretion
tvp05160  Hepatitis C
tvp05200  Pathways in cancer
tvp05202  Transcriptional misregulation in cancer
tvp05207  Chemical carcinogenesis - receptor activation
tvp05216  Thyroid cancer
tvp05222  Small cell lung cancer
tvp05223  Non-small cell lung cancer
tvp05226  Gastric cancer
tvp05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    118843724 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    118843724 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    118843724 (RXRA)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    118843724 (RXRA)
   03320 PPAR signaling pathway
    118843724 (RXRA)
   04919 Thyroid hormone signaling pathway
    118843724 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    118843724 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    118843724 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    118843724 (RXRA)
   05202 Transcriptional misregulation in cancer
    118843724 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    118843724 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    118843724 (RXRA)
   05216 Thyroid cancer
    118843724 (RXRA)
   05222 Small cell lung cancer
    118843724 (RXRA)
   05223 Non-small cell lung cancer
    118843724 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    118843724 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    118843724 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    118843724 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tvp03000]
    118843724 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:tvp03310]
    118843724 (RXRA)
Transcription factors [BR:tvp03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    118843724 (RXRA)
Nuclear receptors [BR:tvp03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   118843724 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 118843724
NCBI-ProteinID: XP_036607371
LinkDB
Position
3:169164943..169454534
AA seq 467 aa
MDTKHFLPLDFSTQVNSTSLNSPTGRGSMAAPSLHPSIGPGLGSSLGSSSQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLNSPMNPVSSTEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLNPNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggacaccaaacatttcctgccgctggatttttccacccaggtcaattccacatccctg
aattcccccactggcagagggtccatggcggcaccctccctgcacccgtccattggcccg
ggccttggttcatcgcttggctcatctagccagctgcactcacccatcagcactctcagc
tcccccatcaatggcatgggccccccgttctctgtcatcagctcccccatggggcctcac
tcaatgtctgtccccacaactcccacccttggatttgggacaggcagcccccagctcaac
tcgccaatgaaccccgtcagcagcacagaagacattaagccaccccttgggctcaatgga
gttcttaaagtgcccgcccatccctcaggaactatggcctccttcaccaagcacatatgt
gccatctgtggggaccgctcctcaggtaaacattatggtgtgtacagttgtgaaggctgt
aaaggcttcttcaagaggacagtgcgcaaggacctcacctatacctgccgagacaataaa
gactgcctgattgacaaacgccagcggaaccggtgccaatactgccgctaccagaagtgt
cttgccatgggcatgaagcgagaagctgttcaagaggagaggcagaggggcaaagaccgg
aatgagaatgaggtggagtcaaccagcagcgctaacgaggacatgccagtggagaagatc
ttggaagccgaacttgctgtggagccaaagacagagacatacattgaggcaaacatggga
ctgaatcccaattcacccaacgaccctgttacgaacatatgccaagcagcagacaaacag
ctcttcaccttggtggaatgggccaagagaatcccccacttctcagagctacccctggat
gaccaggtcattctattgcgagcgggctggaatgagctgctcatcgcctcgttctctcac
cgctcgataacagtgaaagatgggatccttcttgccaccggccttcacgtccataggaac
agcgctcacagtgcaggggtgggcgccatctttgacagagtcctgacagaacttgtgtca
aaaatgcgagacatgcagatggacaagacagagttgggctgcctgagagccattgtcctc
ttcaacccggactctaagggactttctaaccctgcagaagtagaagccctacgagagaaa
gtttacgcttccctcgaagcctactgcaaacacaagtatccggaccagcctggaaggttc
gccaaactcttgcttcgtctccctgctctccgttccattggcctgaaatgcttggagcac
ctcttcttcttcaagctaataggagatacacccattgacaccttcctgatggagatgttg
gaggccccccaccaaatgacatag

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