Trichosurus vulpecula (common brushtail): 118844143
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Entry
118844143 CDS
T10126
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80
KO
K20775
BRCA1-A complex subunit RAP80
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118844143 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118844143 (UIMC1)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
118844143 (UIMC1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
IcmR
UIM_2
Motif
Other DBs
NCBI-GeneID:
118844143
NCBI-ProteinID:
XP_036607874
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Position
3:complement(95675503..95790958)
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AA seq
811 aa
AA seq
DB search
MPRRKKKVAETTESQRLEKENQILKVKKMENSFIVISDSDEEPGEENGLLRTRTMQQSDR
AKCAAKRKITQMTEDEQFALALKMSEQEAQQVNDQVEEEEELLRKAIAESLNSCQPLDSS
ATSSAPLSTEIPAQYHQEKPVVSETTESLFPCPESPHSSVTSLSQGPHFELTEMPKSPLV
MLKRLSQEIVESSLLSSIILSQEKSQPSLKSSEVPSSPVLSDSSDNSSSPPGKKQFVLSP
TFSRVPVGTWQLVPRKLFANSCVSQEEEVEGREKCLDHSGNLEMKPITGSSGTGDKSSQP
MLESKNSNFFDSGTSQWAEDTKYKQPEKKSRLGCGSLVATQGKEKAAQLCLPSTIDVKSL
QEEIGGTVHYYWGIPFCPVGVDPNQYTKVILCQLEVYQKSLKLAQRQLFQKKDFGEPILP
SSYSLLQKEDHDEREEPQGVNEAITKEMGNNTETRRESKSSTLRQKSKNLHRNPLQSLKE
KPLLEDEPTTSHHQNSQVLFAEDTPEEDEVMGITSSPTALSLLTSKRSPVIARGSSAEEI
TVCPETQLSPSEVPELEREEECLSPKESPVKAAVNENIEKEMSASIFSAHIQVSCPMCDQ
GFPPTEIELHAMYCNGLVGEESRHSPVLTRKRKRAKCKSDNERDIQPSLDIDKSEKCYLC
KSLVPFKEYPSHVDFCLQIATDDQGNKLERDDGQPSDFEGKGVRQRNTREGSGNGGRLLS
LLEQSEYKSAETDTKTESSEGEAFRYLPSEMEKADGSRGDQSSFNSDDSPIKAFVSISEA
KDCLVDFKKQLSVRPGGRKRTKASRGKRRKS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggaggaagaagaaagttgcagaaactactgaatctcagagattggagaaggag
aatcaaattctcaaagtaaagaagatggaaaattcattcattgtcatatctgatagtgat
gaggaacctggggaagagaatggattgctgaggacaaggacaatgcagcagtcggataga
gcaaagtgtgcggccaaaagaaaaattacacagatgacagaagatgaacagtttgctttg
gctctgaaaatgagtgaacaggaagcacagcaagtgaatgaccaggtggaagaagaagag
gagctcttaaggaaggccattgctgagagcctgaatagttgccagcctttggattcttct
gccacaagctctgcacctttgtccactgaaatacctgcgcagtaccaccaagagaaacca
gtggtttctgagactactgaaagcttgtttccttgtcctgaatctccacactcatctgtc
acatccctgtcacagggacctcattttgaactgacagaaatgcccaaaagccctctggtg
atgctgaagaggttaagtcaagaaattgttgaaagctcattattatcaagcataatttta
tctcaagaaaagagccagccttcgcttaaatccagtgaggtaccttcctcacccgtgtta
agtgactctagtgataattcatcaagccctcctggtaaaaaacagtttgtcctgagtccc
accttttctcgagtacctgtaggcacatggcaactggtacctcggaaattgtttgcaaac
tcatgtgttagccaagaagaggaggtcgagggaagagagaagtgtttggatcacagtggc
aacttggaaatgaagccaatcactggcagttcgggaactggggataaatccagccagcca
atgcttgaaagtaagaactctaacttttttgacagtggaactagccagtgggctgaggat
acaaagtataaacagcctgaaaaaaagagtagattggggtgtggttcccttgtggctaca
caagggaaagaaaaggcagctcaactctgcctccctagcacaatcgatgtcaagagcctg
caggaggaaattggaggcactgtgcactattactggggcatcccattctgtcctgttgga
gtagaccctaaccagtatactaaggttattctgtgtcagcttgaggtttatcagaaaagt
ctgaaattggctcagaggcaactttttcagaaaaaagactttggagagccaatattaccc
agctcttattccctgctacaaaaggaggatcatgatgaaagagaggaaccccaaggagta
aatgaagctatcacaaaagagatgggaaataacacagaaacaaggagagaatcaaagtcc
tccaccttgcggcaaaaaagtaagaatctccacaggaacccattgcagagtttgaaagaa
aagcctttgttggaggacgaaccaacaaccagtcaccatcagaattcccaagtcctattt
gctgaggatacacctgaagaggatgaagttatggggattacatcaagccccactgctcta
agcctgttgaccagtaagagaagcccggtcattgccaggggaagctctgcagaagaaatc
actgtctgcccagagacacaactaagtccatccgaagttcctgaactagagagagaagag
gagtgcctatctcctaaagaaagccctgttaaggctgctgtcaatgaaaatattgagaag
gaaatgtctgcctccatcttctcggcccatatccaggtgtcctgcccaatgtgtgaccag
ggttttccgcccacagaaattgagctgcatgccatgtattgcaatggtttagtgggggag
gaaagcagacactctccagtgttgactcggaaacggaaacgggccaagtgtaagagtgac
aatgagagagatatccagccatccctagacattgacaagagtgagaaatgttacctctgc
aaatccctggttcctttcaaagagtatccaagtcatgtagacttctgccttcagattgca
acggatgaccaaggaaacaaactggaaagagatgatggacagccttcagattttgaggga
aaaggtgtgaggcagaggaacacaagggaagggagtgggaatggaggccgacttctcagc
ttgttggagcaatctgaatataagtctgcagaaacagatacgaagacagagtcatcagaa
ggagaagctttcaggtatcttccctcagagatggagaaggcagatggtagcagaggagac
cagagctcctttaactcggatgactctcccatcaaggcttttgtttctatttccgaagcc
aaggattgcctggtggactttaaaaagcaactttccgttcgaccaggtggtcggaaacgg
accaaagcgagcagaggaaagaggagaaagtcttga
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