Trichosurus vulpecula (common brushtail): 118844319
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Entry
118844319 CDS
T10126
Name
(RefSeq) protocadherin beta-2-like
KO
K16494
protocadherin beta
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118844319
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvp04515
]
118844319
Cell adhesion molecules [BR:
tvp04515
]
Cadherins
Protocadherins
118844319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Ig_CLSTN
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Ig_Cad99C_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
118844319
NCBI-ProteinID:
XP_036608085
LinkDB
All DBs
Position
3:49618845..49621391
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AA seq
797 aa
AA seq
DB search
MEREGTMILQLRQVLFLLVLLGVSGATSELKQFSVVEEVERASFVGNVAKALDLEVGELS
NRGARVVFKGNKEYLQLHPKTGDLLLREKLDREELCGPAEPCVLSFKILLENPFQIVRAE
LMVEDINDHSPVFLDTEMVLKIPENTVPGTIFVLENAQDLDVGSNGLQNYVISTNSYLHS
QIRNNSKGKRYPELVLDKALDREEQSEITLTLTAVDGGAPPRSGTVRVRVLVVDINDNAP
TFTQSRYEAQILENSPIGSQVITVSAADLDAGNNADISYTFLHASENIRKTFQLTEKSGE
IYLKQKLDFELTQSYIIDIQATDGGDLSGECTVIIQVIDLNDNPPELIMTSLTSPIPENS
PETVVAVFSVSDLDSGENGRMVCSIQDDLPFTLKPSIENFYTLVTEGALDRESRAQYNIS
ITVTDLGSPRLKSEHNITVVISDVNDNPPVFSQRAYKLYLQENNSPALHIGSVSASDRDS
GVNAKVTYSLLPPETGDLPLFSYISINSDNGHLYALRSLDYEAIQGFHFTVRAADGGSPS
LSSQVLVQVLVEDENDNSPFVLYPLQNGTAPCNDLVPRAAEPGYLVTKVVAVDRDWGQNS
WLSYQLLKATDPGLFTLLAHSGEIHTARPINDRDTIKQKLLVLVKDNGQPALSTMATLNV
LLVDGFSEPYMQFPDAPKDQVWTDSLTTYLVISLVSVSFLFLVSVIMFIAIRLWKKKRDA
TDGGHFNPNGPFPGHLVDISGTGTLSQSYQYEVCLPSGSATSEFKFLKPVIPALPPTEGN
EKDSIENPHLRNNFFFT
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcgaagggacgatgattctgcagctaaggcaagttctctttctccttgttctg
ctgggtgtgtctggggcgacctcagagctgaagcagttttcggtagtggaggaggtggag
agagcctcctttgtgggcaatgtggccaaggccctggacctagaggtgggggagctgtca
aatcgtggggccagagttgttttcaaagggaacaaagagtatttacagctgcaccctaag
accggggatctgctcctgagagaaaaactggatcgggaggagctgtgcggccccgctgag
ccctgtgtgctatcttttaagattttactggaaaacccctttcagattgttcgggctgag
ctgatggtggaagatattaatgaccattcaccagtgttcctagatactgaaatggtactg
aaaatccccgaaaacaccgtccccggaactatatttgttctagaaaatgcacaggattta
gacgtaggtagcaacggtctccagaactacgtgatcagtactaactcttatctccacagt
caaattcggaataatagcaagggtaagagatacccagagcttgtattggataaagccctg
gatcgggaggagcagtctgaaatcaccttaactctcactgcagttgatgggggagcccca
ccaaggtctggaactgtccgagtccgagtccttgtagtcgatatcaatgacaatgccccc
acgtttactcagtcccgttatgaggctcagatcctggagaacagtcctattggatcccaa
gtcatcacagtttcagcggcagatttagatgcaggaaataatgcagatatatcctataca
tttttgcatgcctctgaaaacattcgtaaaacgtttcaactaacagaaaagtctggggaa
atttatttaaagcaaaaactagattttgagttaactcagtcttacatcatcgacattcag
gccacagatggtggagacctttcgggagaatgtactgttatcattcaagtgatagatctg
aacgacaatcctccagagctgatcatgacttcgcttaccagccccatcccagagaattct
cctgagactgtggttgctgttttcagtgtttcagatctcgactccggggaaaatggaagg
atggtttgctccatccaagatgatcttccttttaccctgaaaccttccattgagaacttc
tacacactggtaacagaaggagccctggacagagagagcagggcccagtataacatcagc
attactgtcacagatttgggatccccgaggctcaaatctgagcacaatatcacagtggtc
atctctgatgtcaatgataaccctcctgtgttttctcagagagcctacaaactgtacctc
caggagaacaacagtcctgccctccacattggcagtgtcagtgccagtgacagggactca
ggagtcaatgccaaagttacctactctctgctgcctccagagactggagacctgcctctc
ttctcctacatctccatcaactcagacaatggacatctctatgctctcagatccttggat
tatgaagccattcaaggtttccatttcactgtgagagcagctgatggtggttccccatca
ctgagcagccaggttctggttcaggttttggtagaagatgagaatgacaactctcccttt
gtgctgtaccccctgcagaatgggacagctccctgcaatgacctggtgcccagagctgca
gagccaggttacctggtgaccaaggtggtggctgtggatagggactggggacagaattcc
tggctttcctaccaacttctcaaggccacagacccaggactcttcactttgttggcccac
agtggagaaatccacacagcaagacccatcaatgacagagacaccatcaagcagaaactt
ctggtgttggtgaaggacaatgggcaaccagctctctccacgatggccacactgaatgtg
ctcctggtggatggcttctctgagccctatatgcagttcccagatgcacctaaggatcag
gtgtggactgattccctcaccacctacctagttatttccctggtttctgtctcctttctc
ttcctggtctctgttattatgttcatcgccattcgcctgtggaagaagaagagagatgct
actgatggtggtcattttaatccaaatggccccttcccaggtcacttggtggatatcagt
ggaacagggactttgtctcagagttaccagtatgaggtttgcctgcccagtggctcagcc
accagtgaatttaaattcttgaagcctgttattcctgctcttccacctaccgagggaaat
gagaaggattctattgaaaacccacacttgagaaataactttttcttcacttaa
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