Trichosurus vulpecula (common brushtail): 118844403
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Entry
118844403 CDS
T10126
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04140
Autophagy - animal
tvp04211
Longevity regulating pathway
tvp05010
Alzheimer disease
tvp05014
Amyotrophic lateral sclerosis
tvp05016
Huntington disease
tvp05017
Spinocerebellar ataxia
tvp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118844403 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
118844403 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
118844403 (RB1CC1)
05014 Amyotrophic lateral sclerosis
118844403 (RB1CC1)
05016 Huntington disease
118844403 (RB1CC1)
05017 Spinocerebellar ataxia
118844403 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
118844403 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tvp01009
]
118844403 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvp04131
]
118844403 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
tvp03029
]
118844403 (RB1CC1)
Protein phosphatases and associated proteins [BR:
tvp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118844403 (RB1CC1)
Membrane trafficking [BR:
tvp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
118844403 (RB1CC1)
Mitochondrial biogenesis [BR:
tvp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118844403 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
118844403
NCBI-ProteinID:
XP_036608178
LinkDB
All DBs
Position
1:complement(266196627..266284078)
Genome browser
AA seq
1595 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIQSKYKIAIHQQVLVVNGGECMASDRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSAENDMELKVEESLMMPAVFHTVASRTQ
LAVEMHEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTLSYQKLLSKFESAYSNYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSSPEHEGKETENNETEKSS
ELVLYPDMPQMTNKSLLASYCKSVEHSALDNTDAESGKEIRESCQSTIQEEEISVEPKES
DLPSFNVSLLDWINVQDRPNDVESLVRKCFDSMNRLDPRFIQPFLVECRQTVAKLDNQNM
KAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQ
LMIMLNNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADKEGEKLQALLRLVTEL
LERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALISDGKHLYEAEKSKRESFG
KLFRKSFLRNRLFRGLDSWPPSFCTRKPRKFDGELPDISLTDLKFLQSFCPSEVQPLLRV
PLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASMSQTSPQSVTTPRMEST
TGITTTTSPRTPPPLTIQDPLCPPVCPLEELSPDSIDAHTFDFETIPHPNIEQTLHQESL
DLDSLAESPESDFMSAVNEFVIEENLASPNPISDPQSPEMMVESLYSSVINAIDSRRMQD
TNICGKEDSEDHASLNVQMEKCRAVAQESQFNLQNIKEDLCHFRTLVQKEQCDFSNSLKC
TAVEIRNIIEKVKCSLEVTLKEKHQKELQSLKNEYEAKLNTLIKDSEENEKKIKKLKGDL
VGLEEVLQNKDNEFALVKNEKEAVLCLQNEKDQKLLEMEHAMKNQNFEIKELKQSREIVL
EDLKKLHVENEEKLHLLRAELQSLEQSHLKELEDTLQDKHTQEFEKVLNDHKVSLEKLKK
ENQQRLDQIQESHAVIVQEKEQQLQELKLKVSDLSDLRCKLEVELALKEAETDEMKILLE
ENKAQQQETLKILIEKETENLRSEISKLNQKILDNNEDYQIDLAELKTLMTVEKDQCISE
LVGRHEEESNLLRAELNKVTSLHQQAFEIETKLKEQIVELQSKLELELSVLEKQSNERMA
QQEEKYEAIIHKLEEDKEKIVMNQEQDRERLIQKLNCEKEEAVQVALKEFELQREAVEKE
LLEKIKHLESQISKSPPIEHISEDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQN
VRTSLIAEQQTNFNTVLTREKMKKENIINDLSDKLKNTMQQQERDKDLIESLSEDRARLL
EEKKKLEEEVNKLRSSSFVPPPYLATAPELCGACAPELPGETDRLTSEIADEGRTDSAME
TSMMSVHENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIR
DFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGTSRRPWVLGKV
MEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttttggtcaacactggaactaccctaacatttgacactgaactt
gcagtgcaaaccgtggcagaccttaaacatgctatccaaagcaaatataagattgcaatt
caccagcaggtactggtagtaaatggaggagaatgtatggcctcagatcgaagagtatgc
acttacagtgctgggacagacacaaatccaatttttctgtttaacaaagaaatgatctta
tgtgatcgtccacctgctattcccaaaacaactttttcagcagaaaatgacatggaatta
aaagttgaagaatctcttatgatgcctgcagtttttcatacggtagcttcaaggacacag
cttgctgtggaaatgcatgaggttgccaagaagctttgttccttttgtgaaggtctggtc
catgatgaacatctgcaacatcaaggctgggctgcaataatggccaatttagaggattgt
acattatcctaccaaaaactgctttctaagtttgaaagtgcttattcaaattatctacag
tccatagaagacatcaagttgaagcttacacatttaggaactgcggtttcagtaatggcc
aagattccacttttggagtgcctaacaagacatagctacagggaatgtttgggaagactt
gattcttctcctgaacatgaaggaaaagaaacagagaacaatgagactgaaaaatcatca
gaattggtgctttatcctgatatgcctcagatgactaacaaatcattgttagcctcatat
tgcaaatcagtggaacattcagccctggacaacacagatgctgaaagtggcaaagaaatt
agggaatcttgtcagagcactatccaggaggaagaaatttcagtagaacctaaagagagt
gatttgccttctttcaatgtttctttattagactggataaatgttcaagatagacctaat
gatgtggaatctttggtcaggaagtgctttgattctatgaacaggcttgatccaaggttc
attcagccctttttggtagagtgtcgacaaactgttgccaaactggataatcagaacatg
aaagccattaaaggacttgaagacaggctttatgcactggaccagatgatagctagctgc
agccgattggtaaatgaacaaaaagaacttgctcagggatttttagctaaccagaagaga
gctgaaaacttgaaagatacttctgtgctacctgatttgtgcctgagtcatgcaaatcag
ttgatgattatgttgaataatcatagaaaactattggatattaaacagaaatgtaccact
gccaaacaagaacttgcaaataatctacaagtcagattgaagtggtgttgcttcgttatg
cttcatgctgacaaagagggagagaagctgcaagctttgctccgccttgtaacagagctg
ctagaacgagtcaagattgtagaagctcttagtacagttccacagatgtactgcttagct
gttgttgaagttgtaagaagaaaaatgttcataaaacactacagggagtgggctggtgct
ttaatcagtgatggaaaacatttatatgaagcggaaaagtcaaaaagggaatcttttgga
aaactgtttaggaaatcttttttaagaaaccgtctgtttaggggactcgactcctggccc
ccttctttttgtactcgaaaacctcggaagtttgatggtgaacttccagatatttcctta
actgatttgaagtttctgcagtctttctgtccttcagaagtacaaccattactcagggtt
ccattactttgtgactttgaacctctacaccagcatgtacttgcgctacataatttagtg
aaagcagcacaaagtttggatgaaatgtcacagaccattacagacctactgagtgaacag
aaggcttccatgagtcagacatccccacaatcagttactacaccaaggatggaaagtaca
acaggaattacaactactacctcacctagaactcctcctccactcactattcaggatccc
ctgtgtccgccagtgtgtccattagaagaattgtctccagatagcattgatgctcataca
tttgattttgagacaattcctcacccaaatatagaacaaacccttcaccaagaatcttta
gatttagactctttagctgaaagccctgaatctgattttatgtcagcagtgaatgaattt
gtaatagaagaaaatctagcatctcctaatcccataagtgatccacagagtccagaaatg
atggtagaatcactctattcttcagttatcaatgcaatagacagtagacgcatgcaggat
acaaatatatgtggtaaagaagattcagaagaccatgcttctctaaatgttcaaatggag
aaatgtagagctgttgcccaagaatcacagttcaatttacaaaacataaaagaagacctc
tgtcacttccgaacacttgtacagaaagaacagtgtgatttctctaattctttaaaatgt
acagccgtagaaatacgaaatatcattgaaaaagtaaaatgttccctagaagtaacacta
aaagaaaagcatcagaaagaactgcagtctttaaaaaatgagtatgaagctaagctcaat
acattaataaaagatagtgaagaaaacgaaaaaaagattaaaaaattaaaaggagattta
gtaggtcttgaagaggttttacaaaataaagataatgagtttgctttggttaagaatgaa
aaagaagctgtcctctgcctgcaaaatgaaaaagatcagaagctgctagagatggagcat
gcaatgaagaaccaaaattttgaaattaaagaactgaagcaatcacgagaaattgtgttg
gaagacttaaaaaaactccatgttgagaatgaagaaaagttacatctccttagggcagag
ctgcagagtttggagcagagtcacctgaaggaactagaagatacccttcaagacaagcac
acacaggaatttgaaaaagttttgaatgaccacaaagtttctttagagaaattaaaaaag
gaaaatcaacaaagacttgatcaaatacaagaatctcatgcagtaattgtccaagaaaag
gaacaacagttacaggagttaaaactgaaagtttctgatttgtctgacctgagatgcaag
ttagaggttgagcttgctttgaaagaagcagaaactgatgaaatgaaaatattactagaa
gaaaacaaagcccaacagcaagaaaccttaaagatccttattgaaaaagaaacagaaaac
ttgagatcagagataagcaagttaaaccagaagattctagataataatgaggactaccaa
atagatttagcagaactgaaaactctaatgaccgttgaaaaagatcagtgcatttcagag
ttggttggtagacatgaagaagaatcaaatttgctgagagctgaactaaacaaggtaaca
tctttacatcaacaagcttttgaaattgaaactaaattgaaagagcaaatagtggaattg
cagagtaagttggagttggaattgagtgtccttgaaaaacaaagcaatgaaagaatggcc
caacaagaagaaaaatatgaagctattatccataaacttgaagaagacaaagagaaaata
gttatgaatcaagaacaagacagagaacgactcattcagaagcttaattgtgaaaaagag
gaagctgttcaagttgcccttaaagaatttgagttacagagagaggctgttgaaaaagaa
ctgttggaaaaaataaaacatcttgagagtcagataagcaaaagtcctcccattgagcat
atcagtgaagattcatcaagtttagttgctgagcttcaagaaaaacttcaggaagaaaag
gccaagtttttagaacaacttgaagaacaagaaaaaagaaagaatgaagaaatgcaaaat
gtccgaacatctttgattgcagaacaacagactaattttaacactgttctaacaagagaa
aaaatgaagaaagaaaatataataaatgatcttagtgacaaattgaaaaatacaatgcaa
caacaagaacgagataaagatttaattgaatccctttctgaagatcgagctcgtttactt
gaggaaaagaaaaaacttgaagaagaagtaaataaattgcgtagtagcagttttgttcct
ccaccttatttagctacagcccctgaactttgtggtgcttgtgcacctgaactccctggt
gaaacagacagattaacctcagaaatagcagatgaagggagaacagattcagcgatggaa
acaagcatgatgtctgtacatgaaaatattcacatgttgtctgaagaaaaacaaaggata
atgttgttagaaagaactttgcagttaaaagaagaagaaaataagcggttaaatcagaga
ctaatgtctcaaagcatgtcttcagtttcttcaaggcattctgaaaaaatagctattaga
gattttcaggttggagacttggttctcattatcttggatgaacgtcatgacaattatgta
ttatttactgttagcccaactttatacttcctgcattcagagtctcttgctgcattggac
ctcaaaccaggtgagtgtgcttcaggtacatctagaagaccctgggtacttggaaaagta
atggaaaaggaatattgtcaagccaaaaaggcacaaaacagatttaaagttcctctgggt
accaaattttacagagtaaaagctgtgccgtggaacaagaaagtataa
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integrated database retrieval system
