Trichosurus vulpecula (common brushtail): 118844942
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Entry
118844942 CDS
T10126
Symbol
KDM1B
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118844942 (KDM1B)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
118844942 (KDM1B)
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
SWIRM
Pyr_redox_2
FAD_binding_3
HI0933_like
DAO
Pyr_redox
FAD_oxidored
Pyr_redox_3
FAD_binding_2
Lycopene_cycl
GIDA
NAD_binding_9
2-Hacid_dh_C
KARI_N
NAD_binding_7
AlaDh_PNT_C
Attractin
Motif
Other DBs
NCBI-GeneID:
118844942
NCBI-ProteinID:
XP_036608861
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Position
1:186309055..186361383
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AA seq
822 aa
AA seq
DB search
MSTLRVRAKKKAASFDQSSDSLPLRSSGRQVKKKVAEVVADDDDDGSSEKKYRKCEKAGC
TATCPVCFSSAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYAAWKRIWT
SNGKCEPSPKAFMADQQLPYWVQCTKPDCGKWRQLTKEIQLTSQMAQTYRCGTKPNTSVK
AEGSDQCSQPEDLRVAEVSNHWWYSMLILPPFLKDSVAAPLLSAYYPDCVGMSPSCTSTN
RGPGEASPEKVEQCKAVPGVFVPGMNQYFQPFYQPNECGKALCVRPDVMELDELYEFPEY
SRDPTMYLALRNLILALWYTNCKEALTPQKCTHHIIVRGLVRIRCVQEAERILYFMTRKG
LINTGVLSVSPDHHLLPKDYHNKSVIIVGAGPSGLAAARQLHNFGIKVIILEAKDRIGGR
VWDDKSFKGVTVGRGAQIVNGCINNPIALMCEQLGIEMHKLGERCDLIQEGGRITDPTID
KRMDFHFNAILDVVSEWRKDKTQLQDVPLGEKIQEIYKACIQESGIQFXELEEQVLQCHL
SNXEYACGSNLNQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIRLKFPVRT
IDYSGEDVQVTTIDGTVWAAQKVLVTVPLSLLQKGAIQFNPPLPERKTKAINSLGAGIIE
KIALEFPYRFWDSKIQGADFFGHVPPCSSKRGLFAVFYDMDPQGKYSVLMSVITGEAVAS
IKNLDDKQVLQQCMATLRELFKEQEIPDPVNFFVTRWNAEPWIQMAYSFVKTGGSGEAYD
ILAEDIQGTIFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccctcagggttcgagcaaagaaaaaggcagcttcatttgaccagtcttcagat
agtcttcctttgaggagttccgggaggcaggtaaagaaaaaagtagcagaagtagtagca
gacgatgatgatgatggctcatctgagaagaagtacaggaaatgtgaaaaggctggatgt
acagcaacttgtccagtttgcttctcaagtgctgctgaaaggtgtgcaaaaaatggctat
acatctagatggtatcacctgtcctgtggggaacatttttgcaatgaatgctttgatcat
tactaccggagtcacaaagatgggtatgaaaaatatgctgcttggaaaaggatatggact
agtaatgggaaatgtgagcctagtcccaaagcttttatggctgatcaacagcttccatat
tgggttcagtgcacaaaacctgactgtgggaaatggagacagcttacaaaggaaattcag
cttacatcacaaatggcacagacgtatcgctgtggtactaaaccaaacacctcagttaag
gcggagggctcagaccagtgctcccaaccagaggatctaagagttgctgaagtgtctaat
cactggtggtattccatgcttatccttcctccctttctgaaagatagcgtggctgcacct
ttactatctgcctattatcctgactgtgtgggcatgagcccctcctgcaccagcaccaac
cgaggccccggtgaagccagccctgagaaggtagagcagtgcaaggctgttccaggtgtg
tttgttcctgggatgaaccagtacttccagcccttctaccagcccaatgaatgtggaaaa
gccctctgtgtgagaccagatgtgatggaactggatgagctctatgagttcccagaatat
tcacgagaccccaccatgtatttggctttgagaaacctcatccttgctctgtggtatact
aattgcaaagaagcacttacccctcagaaatgcactcatcacattatcgtccgaggcctt
gtgcgcattagatgtgttcaggaagcggagaggatactttattttatgacaagaaaaggt
ctgatcaatactggggttttgtctgtcagccctgaccaccatcttctcccaaaagactac
cacaataaatcagttatcattgttggggctggtccatcaggattagcagctgctaggcaa
ctgcacaactttggaattaaggtgatcatcctagaagccaaagacaggattggtggacga
gtctgggatgacaaatcctttaaaggagtcacagttggaagaggagctcagattgtcaat
ggctgtataaacaaccctatagccctaatgtgtgagcaacttggcatcgaaatgcacaaa
cttggagaaagatgtgacttgatccaggaaggtggaagaatcactgaccccactattgat
aagcgcatggacttccactttaatgccattttggatgttgtttctgagtggaggaaagat
aagactcagctacaagatgttcctctaggagaaaagatccaggaaatctacaaggcctgt
attcaggagtctggcatccagttcnaggagctagaggagcaagtgcttcagtgtcatctc
agcaacncggagtatgcgtgtggcagcaacctaaatcaggtatctgctcgctcgtgggac
cacaatgagttctttgctcagtttgctggtgatcacacacttctgactccagggtattct
gtaataattgagaagctggctgaaggactggacattcgacttaaatttccagttcggacc
attgactattctggggaagacgttcaagtcactaccatagatggtacagtttgggcagca
cagaaggtgttagtcactgtacctttgtccttgctccagaaaggtgctattcagtttaat
ccaccattgcctgagaggaaaacaaaagccatcaatagcttaggagcaggaatcattgaa
aagattgccttggaatttccttatagattttgggacagtaagattcaaggagctgatttt
tttggccatgttcctccttgttccagcaagcgtggacttttcgctgtattttatgatatg
gatcctcagggtaaatacagtgttttgatgtcagtcattactggagaggctgtagcatcc
attaagaacctggatgacaaacaagtcctacaacagtgcatggccacactccgggaacta
ttcaaagaacaagaaataccagacccagtaaatttctttgttactcggtggaacgcagag
ccatggatccagatggcatatagttttgtaaaaacaggaggaagtggtgaagcttacgac
atcctagcagaagacatacaaggaactattttttttgctggtgaggcaacaaataggcac
tttccacaaacagtcacaggggcatacttgagtggtgtacgagaagcaagcaagatagca
gcattttaa
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