Trichosurus vulpecula (common brushtail): 118845062
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Entry
118845062 CDS
T10126
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118845062 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvp03041
]
118845062 (PRPF4)
Spliceosome [BR:
tvp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
118845062 (PRPF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
PRP4
DSE1_N
ASA1
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_NOL10_N
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
118845062
NCBI-ProteinID:
XP_036608984
LinkDB
All DBs
Position
3:complement(160526163..160541206)
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AA seq
523 aa
AA seq
DB search
MASSRASATATKTPSRTPEDTASPVVKKPHIYYGSLEEKEKERLARGESGMLGKEGIKAG
IEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPI
TLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGSNNLKTARL
WIANYSLPRAMKRLEEARLHKEIPETSRTSQKQELHKSLRSLNNFCSQIGDDRPISYCHF
SPNSKLLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDKKDVNLASC
AADGSVKLWSLESDEPVADIEGHSVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEIL
HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNG
YHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH
PGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctcgagcttcggccacggcaaccaaaacccctagtaggactcctgaagac
actgcctcccctgtggtaaagaagcctcatatctattatggcagtttggaagagaaggag
aaggagcgtcttgcaagaggggagtcagggatgttggggaaagaaggaattaaagctgga
attgaggctggaaatattaacataacttctggggaagtctttgaaattgaagaacatatc
agtgaaagacaagcagaagtgctggctgaatttgagcgaaggaagcgagcccggcaaatc
aatgtttccacggatgactcagaagtcaaagcttgccttcgagccctgggtgaaccaatc
acgctctttggagagggccctgctgaaaggagagagagattgagaaatattctctctgtg
gttggcacagatgccttaaaaaagactaaaaaggatgatgaaaaatccaaaaagtccaaa
gaagagtatcagcaaacctggtaccacgaaggatccaataacctgaagactgctaggctg
tggattgctaattattcactacccagggcaatgaagcgcttggaagaagcccgactccat
aaagagattccagaaacatctaggacatctcagaaacaggaactgcacaaatctctccgg
tctttaaataacttctgcagccagattggagatgatcgacccatttcctattgtcatttc
agtcccaattccaaactactggccacagcttgttggagcggactgtgcaaactctggtct
gtccctgattgcagcctcttgcacactctaagaggccacaacaccaatgtaggagcaatt
gtttttcaccccaaatccactgtttccttggacaagaaagatgtcaacctagcctcttgt
gccgctgatgggtctgtgaaactgtggagtctagagagtgatgagcctgtggcagatatc
gaaggccattcagtacgtgtagcaagggtgatgtggcatccctcgggacgttttctgggc
accacctgctatgaccgttcatggcgcctgtgggacttggaggcccaggaggagattctg
caccaggagggccacagcatgggcgtatatgacatcgccttccaccaggatggttcttta
gctggcactgggggactggatgcatttggtcgtgtatgggacctgcgcacaggacgatgc
atcatgttcctagagggccacctgaaggagatttatgggatcaacttctccccaaatggt
taccacattgcaactggcagtggcgacaacacatgcaaagtgtgggaccttaggcagcgg
cgctgtgtctacaccatccctgcccaccagaacttggtgactggagtcaagtttgagcct
atccatgggaacttcttgctcactggtgcctatgacaatacagccaagatctggacgcac
cctggttggtccccactgaagaccctggctggacacgagggaaaagtgatgggcctggac
atttcctctgatggtcagctcatagccacctgttcctatgacaggaccttcaaactctgg
atggctgaatag
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integrated database retrieval system
