Trichosurus vulpecula (common brushtail): 118845578
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Entry
118845578 CDS
T10126
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03030
DNA replication
tvp03410
Base excision repair
tvp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118845578 (POLE)
03410 Base excision repair
118845578 (POLE)
03420 Nucleotide excision repair
118845578 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvp03032
]
118845578 (POLE)
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118845578 (POLE)
Enzymes [BR:
tvp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118845578 (POLE)
DNA replication proteins [BR:
tvp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
118845578 (POLE)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
118845578 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Pox_Ag35
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
118845578
NCBI-ProteinID:
XP_036609456
LinkDB
All DBs
Position
1:49724393..49792816
Genome browser
AA seq
2289 aa
AA seq
DB search
MVSRERGWRRAEPGEEAENSRDDGSSSSSLSALKRLERSQWTDKMDARFGFERLQEPEEK
TGWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALAYKPYFYIATRKGCEREVSSF
LSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVRKEISPAVKKNRE
RDNASDTYTAMLSSALMGGSVTTDEEGASKKIADQLDNVVDMREYDVPYHIRLSIDLKIH
VAHWYNVRYRGSSLPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
VDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIM
VTYNGDFFDWPFVEARAAVHGLSMHQEIGFQKDSQGEYKSSQCIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEDMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQEFNKLTEDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEENVPIEQVTNFQEV
CDEIKNKLTSLKDVPSRIECPLIYHLDVGAMYPNIILTNRLQPSAIVNEATCAACDFNKP
GANCQRKMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDKPARAFHELSREEQAKYE
KKRLADYCRKAYKKIHITKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAMEMGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNVKKPKVTISYPGAMLNI
MVKEGFTNDQYQELTEPTSLTYITRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYS
RAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFI
ISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLMEKHDIYKQKKISELFIHEGKRQVTVNQ
HPEGSQGHGILDMEDLGLTKPLQSAVPIATKRKRVPVESQEESQNLELTQSWREILGQPP
SLGTTKEEWLVWLTFHKKKWELQARQRQERRKRRRVETRGGVLGSGVIRDGPATGLGHFL
RKTARSILDLPWQIVQISETNQPGLFRLWAVIGNDLHCIKLNIPRVFYVNQRVPKEEDGP
SFRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLLRALI
QLGCVCMVSRQLVQHLTGREAETFPLEYLEMRSLAQFSYLEPGSIRHIFLYHHSQGSKAL
FGLFFPSQRKASVFVLDTVRSNQMPNLNSMYSSEHRLLLEKVGPELLPPDKHIFEVRAET
DLKTIYRAIQRLLLGYKEERRGPTLIAVQSNWELKRLATGMPVFEEFPLVPVCVTDDINY
GALDWQRHAARRMIRHYLNLDTCLSQAFEMSRYFHIPVGNLPEDISTFGSDLFFSRHLRH
HNHLLWFSPTSRPDLGGKEADDNRLVMEFDDQASVEINNPGCYSTVCLELDIQNLAVNTI
LQSHHVNDMEGASSMGISFDVIQQASLEEMVTGNQAANIPASYDETALCSNTFRILKSMV
VGWVKEITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLSMMKKLFLQLVAEFKRL
GSSVIYANFNRIILCTKKRRIEDAIAYIDYITNSIHSKEIFHSLTISFSRCWEFLLWMDP
ANYGGIKGKVPRRVHYGEQNTQKEQKEEEQGSEEEEEEEEEEEEADKEMIEESNVEDLLD
NNWNIVQFLPQAASCQSYFLMIISAYIVAVYHSMKEELRRSAPGCTPVKRRGNSQLSQEA
EGVAGALPGMITFSQDYVANELTQNFFTITQKIQRKVMGSRNSTEPSEMFPLLPGSHLLL
NNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVI
CRNCNFCRDLDLCKDPFLSQDASILPQWLCSNCQAAYDSAHIEMALVEALQKKLMAFTLQ
DLICLKCKGVKEANMPVYCSCAGDFALTIQTKVFVEQIGIFRNIARHYGMTYLTEMIEWL
LRMNPQLAN
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccgggagcgcgggtggagacgcgccgaacccggggaggaggccgagaacagt
cgggatgatggctcttcctcgtcttcactctctgccctcaagcgcttggagcggagtcaa
tggacagacaagatggatgcaagatttggtttcgaaagactacaggagcctgaagagaag
actggctggctaatcaacatgcacccgactgagattttagatgaagataaacgcttggtc
agtgcagtggattactacttcatccaagatgatggcagccgatttaaggtggcactggct
tataagccatatttctacatagcaacaaggaagggttgtgagcgagaagtgtcatctttt
ctctctaagaagtttcaggggaaaattgccaaattggagactgttcccaaagaggatctg
gacttgccaaatcacttggtgggcttgaagcgaaattatattaaactctctttcaacact
gtggatgaccttgtaaaagtgaggaaggagatttctccagctgtgaaaaagaatcgagag
cgggataatgccagtgacacctatacggctatgttgtccagtgcattgatggggggtagt
gtaactactgatgaagagggggcctctaagaagatagctgaccagttggacaatgtagtt
gacatgcgagagtatgacgttccctaccacattcgtttgtccattgacctgaagatccat
gtggctcattggtataatgttcggtaccggggcagttcccttcccgttgagatcacccgc
cgagatgaccttgttgaacgacctgaccctgtagttttggcatttgacattgaaacaacc
aaactgcctctcaagttcccagatgcagagactgaccagattatgatgatctcttacatg
gtagatggtcagggatacctgatcaccaacagggagattgtctctgaggacattgaagat
tttgagttcacccctaagccagaatatgagggacccttttgtgtcttcaatgaacctgat
gaggctcatttaatccagaggtggtttgagcacgttcaggaaaccaaacctaccatcatg
gtaacctacaatggtgatttttttgactggccatttgtggaggccagggcagcagttcat
ggactgagtatgcatcaggagattggattccaaaaggacagccaaggggagtacaagtcc
tctcagtgcatccacatggactgtctcagatgggtaaagagggacagttatcttccagtg
ggcagccacaaccttaaagctgcagccaaagccaaactagggtatgatcctgtggagttg
gaccctgaggacatgtgtcgaatggccaccgaggagcctcagacactagctacatattca
gtatcagatgctgttgccacttactacatgtatatgaagtacgtccatcctttcatcttt
gctctgtgcaccatcatccccatggaaccagatgaggtcttacggaagggttcagggacc
ctgtgtgaagccttgctgatggtccaggctttccatgccaacatagtttttcccaacaag
caagagcaggagttcaacaaactgactgaagatggccatgtattggactcagagacatac
gttgggggccatgtggaggcactggaatcaggcgtcttccgcagtgacattccctgccga
tttaaaatgaatcctgcagcctttgacttcttgcttcagcgtgtggagaagactatgcgc
catgctattgaagaagaagagaatgtgcccattgagcaggttaccaacttccaagaggtg
tgtgatgaaattaagaacaaactgacctcccttaaggatgtgcccagtcgaattgagtgt
cctctcatataccacctggatgtgggtgccatgtaccccaatattatcctgactaacagg
ttacagccttctgccatcgtgaatgaggccacatgtgctgcctgtgactttaacaagcca
ggtgctaactgtcagcgaaagatgacctggcagtggaggggggagttcatgccggccagc
cgcagtgagtatcatcgtattcagcagcagctggagtcagagaagtttcccccattgttc
ccagacaaaccagcccgggcatttcacgagctgtcccgagaagagcaggctaaatatgag
aagaagcgactggcagattactgccggaaagcttacaagaagatccatatcaccaaggtg
gaagagcgcctcaccaccatctgccagcgggaaaactccttctatgtagacacagtccga
gctttccgagaccgacggtatgagttcaaaggactgcataaggtatggaagaagaagctg
tctgctgccatggagatgggtgatgctgctgaagtcaagcggtgtaagaacatggagatc
ttatatgattccttacagctggctcacaagtgtatcctcaactctttctatggctatgtg
atgcgcaaaggggctcgatggtattccatggagatggcaggaatcgtctgctttacagga
gccaatatcatcacgcaggcccgggagctgattgagcagattgggagacctttagagctt
gacacagatggaatctggtgtgtcctaccgaacagcttcccagaaaactttgtcatcaag
tcaaccaatgtgaagaagcccaaggtgaccatctcctaccctggagctatgctaaacatc
atggtgaaggaaggcttcacaaatgatcaatatcaagagctcactgagcccacttccctc
acctacatcacccgctcagaaaacagcatattctttgaagtggatggtccataccttgct
atgattcttccagcatccaaggaggaggggaagaaactgaagaaaagatatgctgtgttc
aatgaagatggctccctggctgagctaaagggctttgaggtcaaaagacgtggagagcta
cagctgattaagattttccagtcatccgtgtttgaagccttcctgaagggcagtaccttg
gaggaagtgtatggctctgttgccaaagtagcagattattggctagatgtgctgtatagc
agggcggccaacatgcccgactcagaactgtttgagctgatctcagaaaaccgctccatg
tctcggaaactggaagactatggcgagcaaaaatccacgtccatcagtacagctaagagg
ctggctgagttcttgggggaccagatggtgaaggatgctgggctgagctgtcgcttcatc
atttcccgcaaacccgaagggtctccagtcacagagagggccatcccacttgcgattttc
caagcagaacccacagtaagaaaacacttcctccggaaatggctcaagagctcttcccta
caagactttgacattcggacaatcctggactgggattactacattgaaagacttgggagt
gccatccagaagatcatcaccatccctgcagccctgcagcaggtaaagaacccagtgcca
cgtgtccgacaccctgactggctacacaagaagctgatggagaagcatgatatatataag
cagaagaagatcagtgagctatttatccatgagggcaagagacaggtcactgtcaatcag
catccagagggtagccagggacacgggattctggacatggaggaccttggtcttaccaag
ccattgcagtcggcagtcccaattgccaccaaaaggaagcgagtccctgtagagagccaa
gaagagtcccagaatttggagttgacccaatcctggcgagaaattttgggacagcctcca
tctcttggtacaaccaaggaagagtggctggtatggctcacattccataagaagaagtgg
gagctgcaggcccgtcagcgccaggagcgtaggaagagacggcgtgtggagacgaggggg
ggtgtgctgggctcaggggtcatccgagatggcccagccacagggctagggcacttcctg
cgaaaaacagcccgcagcatcctggacctgccttggcagattgtgcagatcagtgagacc
aaccaacctggccttttcagactttgggctgtcattggcaacgatctgcactgtatcaaa
ctgaatatcccacgtgtgttttatgtgaaccagcgtgtgcctaaggaggaagacggacct
tctttccgtaaggtgaacagagtcctccctcgttccaacatggtctataatctgtatgag
tattcggtgccagaggacatgtaccaggaacatattaatgagatcaatgctgacttgtct
gcaccagacattgagggcgtgtatgagacccaggtgccattgttgctacgggctctcatc
caattaggctgtgtgtgtatggtcagtaggcagctggtacagcacctcacaggccgagag
gctgagacctttcctctagagtacttggaaatgcgttccttggcacagttcagctatctt
gaaccaggaagcatccggcacatctttctttatcaccactctcaaggcagcaaggccctt
tttgggctcttcttcccctcccagcgcaaagcctctgtgtttgtcttagatacggtgcgc
agtaaccagatgccaaacctgaattccatgtactcatcggagcaccgcctcctgctggag
aaggtgggacctgagctcctaccaccagacaagcacatttttgaagtgcgagctgagact
gacctgaagactatctatagagccatccagcgtctgttgctcggctacaaggaggaacgc
cgaggccccacactcattgctgtacagtccaactgggagctaaagaggctagccactggg
atgcctgtctttgaggagttcccattggtgccagtctgtgtgactgatgacatcaactat
ggggccttggactggcagcgtcatgcagcccggcgcatgatccggcactatctcaacctg
gacacttgcctgtctcaggcttttgagatgagtagatattttcacattcctgttgggaac
ctccccgaagacatctccacctttggttcagatctcttcttctctcgccacctccggcac
cataatcacctgctctggttttctcctacatcccgccctgacttaggtgggaaagaagca
gatgacaatcgccttgtcatggagtttgatgaccaggcttcagtggaaataaacaaccct
gggtgttactccactgtgtgtttggaattggacatccagaacttggcagtaaataccatc
ttgcagtcccaccatgttaatgacatggaaggagcctccagcatgggcatcagcttcgat
gtcatccagcaagcctctctggaggaaatggtcaccgggaaccaggcagccaacatccca
gccagctatgatgagactgccctctgctctaacacattcaggatcttaaagagcatggtg
gtgggctgggtgaaggagatcactcagtaccacaacgtctatgctgacaaccaagtgatg
cacttttaccgctggctccggtccccatcctccctcctctatgaccccgctctgcaccgg
actctccttagcatgatgaagaagctcttcctccagctggtagcggagttcaaacgcctg
ggttcctctgtcatttatgccaacttcaatcgcatcatcctctgcaccaagaagcgtcgc
atcgaggatgccattgcctacatagactacatcaccaacagcatccactccaaagagatc
ttccattctttgacgatctccttctcccggtgctgggaatttcttctctggatggatcct
gctaactatgggggaatcaaaggaaaagttccaagacgtgtccactatggagagcagaac
acccagaaagagcagaaagaagaagagcaagggagcgaggaagaagaggaggaagaagaa
gaagaagaagaagcagacaaggagatgatagaagaatctaacgtggaagacttattggat
aacaactggaacattgtacagtttcttccccaggcagcctcttgccagagctactttctc
atgattatctcagcgtatattgtggctgtgtaccatagcatgaaagaggagctgagacga
agtgcccccggctgcacgcccgtcaagaggagagggaacagccagttgtcccaggaggct
gaaggggtagctggggctcttcctggaatgatcaccttctcccaagattatgtagccaat
gagctcacccagaacttcttcaccatcactcagaagatccaaaggaaagtgatgggctcc
cgcaactccacagagccctccgagatgttcccgctcctcccgggctcccatttgctgctc
aacaaccctgccctggagttcataaagtatgtgtgcaaggtgctctctctggataccaac
atcaccaaccaagtgaacaagctgaaccgcgacctcctacggctcgtggacgtgggcgag
ttctcagaggaggcccagttccgggacccctgccgctcctacgtgctccctgaggtcatc
tgccggaactgcaacttctgccgggacctggacctctgcaaagaccccttcctctctcag
gatgcctcgatcttgcctcagtggctttgctccaattgccaggcagcatatgactctgcc
cacattgagatggccctggtagaagcccttcagaagaagctgatggcctttaccctgcag
gacctgatctgcctcaagtgtaaaggggtgaaggaggccaacatgcctgtctactgcagc
tgtgccggagactttgccctgaccattcagaccaaggtcttcgtagagcagatcggcatc
ttcaggaacattgcccggcattatggcatgacctaccttacagaaatgattgagtggctg
ctacggatgaatccccagcttgccaactag
DBGET
integrated database retrieval system
