Trichosurus vulpecula (common brushtail): 118846030
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Entry
118846030 CDS
T10126
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03008
Ribosome biogenesis in eukaryotes
tvp05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118846030 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
118846030 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118846030 (DROSHA)
03009 Ribosome biogenesis [BR:
tvp03009
]
118846030 (DROSHA)
03036 Chromosome and associated proteins [BR:
tvp03036
]
118846030 (DROSHA)
Enzymes [BR:
tvp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
118846030 (DROSHA)
Messenger RNA biogenesis [BR:
tvp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
118846030 (DROSHA)
Ribosome biogenesis [BR:
tvp03009
]
Eukaryotic type
90S particles
RNase
118846030 (DROSHA)
Prokaryotic type
rRNA processing factors
118846030 (DROSHA)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
118846030 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
118846030
NCBI-ProteinID:
XP_036610079
LinkDB
All DBs
Position
1:312794709..312907090
Genome browser
AA seq
1402 aa
AA seq
DB search
MSFHSGRGNSRGRGGSGGRASTQTFRPQNLRQLHPQQPTGQYQYEQPVAPPATFTSPPTT
SYLPPRPDFVPYPPPVPPTAQTPVTQCPLRPPLPNHQVRPTFPVPPCFPPVPPPVPAPTN
TSVPGTPATQTTFPYMMPPPSLPPPPPVIPPQVNYPSVYPTTYSQQSFPPPNFSSYQNNS
SSFQTSSNNNSSSHFRHPTQYQVEKPSSERRSPERSKHYDDHRHREHSHGHGDRHRSDSH
GDRRDRTRSPDRRRQESSRHRSDYDRGRTPPRHRSYEHSRERERDRDRDRHRHRESRRSP
SPDRSYKKEYKRTSSRSPSREKKRTRWEDDRDRWVDSQNSGKEKSYTSIKDKEPEEIMPD
KNEEEEEDLLKPVWIRCTHSESYYSNDPMDQVGDSTVVGTSRLRDLYEKFEEELGKRQAK
AKAVRPPWEPPKTKLDEDLDSSSESDCDSDDDSSCSSSSDSDVFDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVKGLELFSLYLFRDILELYDWNLTGPSFENNSSCCPRFHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCNKALVPEEEIANMLQWEELEWQKYAEECKGMIVNNPGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQIPSFFQDSAQMPPSAGDCSRSSQLLEPTT
LRYQKLWKSYVKLRHLLANSPKVKQADKQKLAQREEALQKIRQKNTMRREVTVELSSQGF
WKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHPSHHLNFG
MNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPSSHRLNPN
SSKPSHKCVPLSARKIRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIV
QNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLF
GRLLFNDKDLREVWLNYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLL
ARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNN
RTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVC
FFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYF
KGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEK
EPDETDEAVTPYIQVKREELSP
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccactctggacgaggcaattcccgaggacgaggaggatctggtggaagagct
tcgactcaaaccttcaggcctcagaatttgagacagcttcatcctcagcagcctactggg
caataccagtatgaacaaccagttgctcccccagccactttcacaagtcctccaactaca
agctacttgccacccaggccagattttgtgccctaccccccacctgtgcctccaacagca
cagactcctgttacccagtgtcctctcaggccacctctccccaaccatcaagtaagacca
acttttccagtaccaccttgctttccccctgttcctcctcctgtacctgctcctactaac
acttcagtacctggaacacctgctacacaaactacctttccctatatgatgccacctcct
tccctgccaccaccacccccagtaataccaccacaagttaattatccatcagtgtatccc
acaacctattcacagcaatctttcccacctcctaattttagtagttaccagaataactct
agttcttttcagaccagcagtaataataacagcagtagccattttaggcacccaactcag
tatcaggtagaaaagccttcgagtgaaaggaggtccccagaaaggagtaagcactatgat
gaccaccggcatcgagaacatagtcatggacatggcgaccgacaccggtcagatagtcat
ggagatcggcgggacagaactcgaagtccagacaggaggagacaagaaagtagccgacat
agatcagattacgacagagggaggactccccctcgtcaccgaagttatgagcatagcaga
gagcgagaacgggacagggacagggacagacacaggcaccgagaaagccgaagatcccca
tctccagacagatcctacaaaaaagagtacaagcgaaccagcagccgatctccaagtaga
gagaagaagagaactcgatgggaagatgacagagatcgatgggttgacagtcagaattct
ggcaaagaaaagagctatacctcaatcaaggacaaagagccagaggagatcatgcctgac
aaaaatgaagaagaagaagaggatctgcttaaaccagtctggattcgttgtactcattca
gaaagctactattctaatgaccccatggatcaagtgggagattctacagttgttgggacg
agtaggctccgagacttgtacgaaaagtttgaagaagaattagggaagaggcaagcaaaa
gccaaagctgtgaggcccccatgggagccaccgaagaccaaactagatgaagatttagat
agctccagcgaatctgactgtgattctgatgatgatagcagctgttccagtagctcagac
tctgatgttttcgatgtaattgctgaaatcaaacgcaaaaaagcccaccctgatcgactt
catgaagagctctggtataatgaccctggacagatgaatgatggccctctctgtaaatgc
agtgcaaaagcgaggcgcacaggaatccggcacagcatctatcccggtgaagagcccatc
aaaccctgtcgtcctatgaccaataatgctggcagactctaccactatcgaattacggtt
tcacctcctacaaactttttgactgatagaccaactgttatagaatatgatgatcatgaa
tatatttttgaaggattttctatgtttgcacatgctcctttgaccaatattcctctgtgt
aaagtaattagatttaatatagactacacaattcatttcattgaagagatgatgcctgag
aatttttgtgtgaaaggccttgagctcttttccttgtacctgttcagagacattttggaa
ctctatgattggaatcttacaggcccttcatttgaaaataatagttcatgctgtccaaga
tttcatttcatgccacgttttgtaagatttcttccagatggaggaaaggaagtgctatca
atgcatcagattctactctacttgttgagatgtaacaaagctttggtgcctgaagaagag
attgctaacatgctccagtgggaagaacttgaatggcagaaatatgcagaggaatgtaaa
ggaatgattgttaacaatcctggcatgaaacctagttcagtacgcattgatcagctggat
cgggaacagttcaaccctgatgtgattacttttccaattattgtccactttgggatacgc
cctgcccagttgagttatgcaggagaccctcaaatccctagcttctttcaagactcagct
caaatgccaccttctgcaggagactgttcccggtcatcacagctgctagagcctaccact
ctaaggtatcagaagctatggaaaagctatgtgaagctccgccacctcttggcaaatagc
cccaaggtcaaacaggctgacaagcaaaagctggcacagagagaggaagctctgcagaaa
attcgacagaagaatacaatgaggagagaggtgacagtggaactgagtagccaaggattc
tggaaaactggcatccgttctgatgtttgccagcacgcaatgatgcttcctgttttgacc
catcatatccgttatcaccagtgcttgatgcatcttgacaagttgattggatatactttc
caagatcgttgtctgctacagctagcaatgacccatcccagccatcacctaaactttgga
atgaatcctgatcatgctcgtaactctttatccaactgcggcatacgtcaacccaaatat
ggagacagaaaagtccatcatatgcacatgaggaaaaaaggaattaacaccttaataaat
atcatgtcacgccttggtcaagatgaccctactccttccagccacagactgaacccgaac
tccagcaagccgtctcacaaatgtgtgcccttgagtgcaaggaagatcaggattaaccac
aatgaacgtttggaattcctgggtgatgctgttgttgaatttttaactagcgtccacctg
tactacctgtttcctagcctagaagaaggaggattagcaacctatcgcactgctattgtt
cagaaccaacatcttgctatgttagcaaagaaacttgaactggaccgattcatgctttat
gctcatggacctgacctctgtagagaatcagaccttcgccatgctatggcaaattgtttt
gaggctttaataggagctgtttacttggagggaagccttgaagaagctaaacagttattt
gggcgtttgctctttaatgacaaggacctccgggaagtatggcttaattatccactacac
ccactccaactacaggagccaaatactgatcgacaactcattgaaacctctccagtacta
cagaagcttacagaattcgaggaagctattggagtcatttttactcatgttcgacttctg
gcacgagcattcacattgagaacagtgggatttaatcatctgactctaggccataatcag
agaatggaattcctgggtgactctataatgcagttggtcgctacagagtacttattcatt
cattttcctgatcatcatgaaggccacttaacgcttttacgcagctctctggtgaataac
agaacacaagcaaaagtagcagaagagctgggcatgcaggaatatgccatcaccaatgac
aagaccaagagacctgtcgctctacgtactaagaccttggctgatcttttggaatcattt
attgctgcactatacattgataaggatttggaatacgttcacactttcatgaatgtgtgc
ttctttccaaggctaaaggagttcattttgaatcaggattggaatgatcctaaatctcaa
cttcagcagtgctgcctgacccttagaacagagggaaaagagcccgacattcctctctat
aagactcttcaaacagtggggccatctcatgcaagaacttatactgtggctgtttatttc
aaaggggaaagaataggctgtggaaaaggcccaagtattcagcaagcagaaatgggagct
gcaatggacgcccttgaaaaatataactttccccagatggcccatcagaagcggttcatt
gagcggaaatacagacaagagttgaaagaaatgaggtgggaaagagagcatcaggagaaa
gagccagatgagactgatgaagcggtgacaccatacatacaagtgaaacgtgaagaatta
agtccgtga
DBGET
integrated database retrieval system
