KEGG   Trichosurus vulpecula (common brushtail): 118846085
Entry
118846085         CDS       T10126                                 
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
  KO
K14409  protein SMG7
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118846085 (SMG7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvp03019]
    118846085 (SMG7)
Messenger RNA biogenesis [BR:tvp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     118846085 (SMG7)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118846085 (SMG7)
SSDB
Motif
Pfam: EST1_DNA_bind EST1 TPR_2
Other DBs
NCBI-GeneID: 118846085
NCBI-ProteinID: XP_036610161
LinkDB
Position
4:78834403..78931136
AA seq 1187 aa
MSLQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTRWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFISFLGILCKCPLQNEYQEESCSAYP
LPAVKVSMDWLKLRPSVFQEAVVDERQYIWPWLISLLNSFQPHEEDLSSTNATPLPEEFE
LQGFLALRPSFRNLDFSKGHQGITGDKEGQQWRIRQQRLISIGKWIADNQPRLIQCENEV
GKLLFITEIPELLLEDPSEAKENFVLQEASLVESLPAEGSPGLKSVLSTGRSVSTNCDTT
EKPMVTFKENIKPREVNREQGRSYPPKEVRRDCSKGIAVTKSGGKKDNNKRNNETKKCTL
EKLQEAGKQSVAVQVKSQTELRKTPVSEARKTPVTQTPSQASNSQFIPIHHPGAFPPLPS
RPGFPPPAYVIPPPVAFSMGSGYTFPAGVSVPGTYLQPTAHSPAGNQVQAGKQSHIPYSQ
QRPSGPGPMNQGPQQSQPPSQQSLSSLPAQPTAQSTSQLQVQALAQQQQSPTKAVQALGK
SPPHHSGFQQYQADASKQLWNPPQVQGTLGKIMPVKQPYYLQTQDSLKLFEPSLQPPVMQ
QQPLEKKMKPFTMEPYNQNPSEVKVPEFYWDPTYNMADNRAVMTQQASVDRRGKRPPGVF
PSEQDPVPRMPFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGR
SLFKSLLEKPSELMSHSSSFLSLTGFSLNQERYPNNSMFNEVYGKNLSTSAKAEVNPSMS
HQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGP
IGTPDNRDRRIADRWKTDKPAMGGFGFDYLPATSSSSETSWHQAGTPSGTWTGHGPSMED
SSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq 3564 nt   +upstreamnt  +downstreamnt
atgagcctgcagagcgcacagtatctccggcaggcagaagtcctgaaggctgacatgaca
gattccaagctgggtccagctgaggtctggacatctaggcaggctctacaggacctgtac
cagaaaatgctagttactgatctggagtatgctttagataagaaagtggaacaggatctc
tggaatcatgcctttaagaatcagatcacaacactacagggccaggcaaagaatcgagca
aaccctaatcggagtgaagttcaagcaaacctttctctgtttttagaggcagctagtggc
ttctatacgcagttgttacaggagctgtgcacagtgtttaatgtagatttaccttgccgt
gtaaagtcttcccagttggggattatcagcaataaacagacgcataccagcgccatagta
aagccacagtctagctcctgctcgtatatctgccagcactgcctcgtccaccttggagac
atcgctcgctatagaaaccagaccagccaggcagagtcctactataggcatgcagctcag
cttgtcccctccaatggtcagccttacaatcagttggctattttagcttcttccaaagga
gaccatctgaccacaattttctactactgcagaagcatcgctgtgaagttccctttccca
gctgcctccactaatcttcaaaaagcactttctaaagcactggaaagccgggatgaggtg
aaaactagatggggtgtttctgacttcatcaaagcctttattaaattccatggtcacgtg
tatctgagcaagagtttagagaagctgagccctcttcgagagaaattggaggaacagttt
aagagactgctattccaaaaagcattcaactctcagcagctagttcacgtcactgtcatt
aacctgtttcaacttcatcaccttcgtgactttagcaatgaaactgaacaacacagttac
agccaggatgagcagctgtgttggacgcagctactggccctctttatctcttttcttggc
atcctgtgcaagtgccctcttcagaatgaatatcaggaggaatcatgcagtgcatatccc
cttcctgctgtcaaggtctcaatggattggctgaaacttagacccagtgtttttcaggag
gccgtggttgatgaaagacagtacatctggccctggctgatctctcttctaaacagcttc
cagccacatgaagaagatctctccagcactaatgctactccacttcccgaagagtttgag
ttacagggattcttagccctaagaccttctttcaggaacttagatttctccaaaggccac
caggggattacaggagacaaagagggacagcagtggcgaattcgccaacagcgtttgatc
tctataggcaaatggattgctgataatcagccgaggctgattcagtgtgaaaatgaggtg
gggaaattgttgtttatcacagagatcccagagttattactagaagaccccagtgaagcc
aaagagaacttcgtccttcaagaagcctcccttgtggagtccctacctgcggaagggagc
ccggggctgaaatccgtgctgtctacaggcagaagcgtgagcaccaactgcgacaccacg
gagaaacccatggtcaccttcaaggagaacattaagcctcgagaggtgaacagagagcaa
ggaagaagctacccacccaaagaggtgagaagggactgtagcaaaggcatagcagttact
aaaagtggtggaaagaaggacaacaacaagaggaacaatgagaccaagaaatgcacctta
gagaagttgcaggaagcgggaaagcagagtgtggcagtgcaggtaaaatctcagactgaa
ttaaggaagaccccagtgtctgaagctagaaaaacacctgtaactcagaccccaagtcag
gcaagcaattcccagttcatccctatacatcacccaggagccttccctccccttcccagc
cgaccagggttcccacccccagcatatgttatcccccctcctgtggcattctctatgggc
tcaggttacaccttcccagctggtgtttctgtcccaggaacctatcttcagcctacagct
cactctccagcaggaaaccaggtgcaagctgggaaacagtcccacattccttacagccag
caacggccctctggaccagggccaatgaaccagggacctcaacagtcacagccaccttct
caacaatccctttcatctttaccagctcagccaacagcacagtctacaagccaattgcag
gtccaggcactggctcagcaacaacaatctcctacgaaagctgtgcaggctttggggaaa
agccctcctcatcattctggattccaacagtatcaggcagatgcttccaaacagctgtgg
aatccacctcaggtccaaggcaccttagggaagatcatgcctgtaaagcagccctactac
cttcagacccaggactccctaaaactatttgagccgtccttgcaacctccagttatgcaa
cagcagcctctagagaaaaaaatgaagccttttaccatggagccatataaccagaatccc
tcagaagtcaaggtcccagaattctactgggatccgacttacaacatggctgataatcga
gcagtgatgacccagcaggcgagtgtggaccgtcggggcaaaaggcctccaggcgttttt
ccctccgagcaggatcctgtacccaggatgccattcgaggaccccaagagctcccctctg
cttcctccggacctgttaaagagtctggctgccttggaggaagaggaagagctgattttt
tctaaccctcctgatctttacccagctctgctggggcctctcgcctctcttcctggacga
agcctctttaagtccctgttggagaaaccctctgagctcatgtctcattcctcttctttc
ctatccctcactggcttctctctcaatcaggaaagatacccaaataacagcatgttcaac
gaagtatatggcaaaaacctgagtaccagcgcaaaagcagaggtgaatccctcaatgagc
caccaagaaacatcattgtactctctcttcgaagggactccgtggtctccatcccttcct
gccagttcagatcattcaacaccagccagccagtctcctcactcttctaacccaagtagt
ctgccaagttctcctccaacacacaaccataattctgttccattctccaattttggaccc
attgggactccagataatagggataggaggatcgcagatcgttggaaaacagataaacca
gctatgggtggatttggctttgattatctcccagcaacatcctcatcctctgagaccagc
tggcaccaggccggtactccaagtggtacctggacaggccatggtccttccatggaggat
tcttctgctgtccttatggaaagcctaaagtctatctggtccagttccatgatgcaccct
ggaccttcagccctggagcagctgttgatgcagcaaaagcaaaagcagcagcgtggacaa
ggcaccatgaacccaccgcactga

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