Trichosurus vulpecula (common brushtail): 118846321
Help
Entry
118846321 CDS
T10126
Symbol
TPR
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03013
Nucleocytoplasmic transport
tvp05014
Amyotrophic lateral sclerosis
tvp05200
Pathways in cancer
tvp05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118846321 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118846321 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
118846321 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118846321 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118846321 (TPR)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118846321 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Intein_splicing
Ntox1
Motif
Other DBs
NCBI-GeneID:
118846321
NCBI-ProteinID:
XP_036610620
LinkDB
All DBs
Position
4:complement(81982347..82064220)
Genome browser
AA seq
2436 aa
AA seq
DB search
MTSRNLSEKSSRLLGAGRGLTRSRRASLREAGVRVGVAREDSARAPAPAPAAASLSLPSA
PLQPPPLGDPDIGNMAAVLQQVLERQELTKLPKPVQAKLEKFLADQQSEIDCLKGRHEKF
KVESEQQYFEVEKRLSQCQERLVNESRECQTLRQELEKLNQQFKSVTEKNKELETAQDRH
VAVQSQLTRAKEELEAEKRDLVRTSERRSQELEYLTEDVKRLNEKLKESNTSKGELQLKL
DELQASDVSIKYREKRLEQEKELLHSQNTWLNTELKTKTDELLAVGREKGNEILELKCNL
ENKKEEVSRMEEQVNGLKTSNEHLQKHVEELLTKLKEAKEQQTSMEEKFHNELNAHIKLS
NLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKGMQDHLIEVEESKAQMEKEMLEKI
GKLERELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQ
DQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQ
RLQEDTDKANKHSSVLXRDNQRMEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADI
SSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETRXREEQETTSSRITELQIQLERA
LAELEQLHDSRQHQMQLVDSIVRQRDMYRILLSQTTGVVIPLQASNLEEISLMSTPKHSS
GVSQTISTPAPVSTVESTEAVEAKAALKQLQEIFENYKKEKIEHDKIQNEQVEKLQEQVA
DLRSQHTKISTQXDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQ
DLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLTQQRESLLAEQRGQNLLLTNLQTIQGI
LERSETETKQRLNNQIEKLEREISQLKKKLEGEVEQRHTLTRNQDVHLLDTKRQLETEIN
RHLNTKELLKNAQKETATLKQQLNNVEAQLASQSAQRSGKGQPSTKEDIDDLISQLRQAE
EQITXPERKTQDKFSNVEQYQSYGSXLRGILNKEKQVTEEVRKNVEARLKDSAEYRXQLE
KKLMEAEKEKQELQDEKCRAXESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQAR
RDCQEQAKIAIEAQNKYERELMLHAADVEALQAAKEQVSKNLLVRQQLEETAQKAESQLL
ECKASWEERERMLKDEAAKCVSRCEDLEKQNRLLHDQIEKLSDKVVTSMKEGVQGSLNVS
LNEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAE
REKVQVTAKTMAQHEELMKKTETMNVLIETNKILREEKERLEQELQQMQAKVRKLELDIL
PLQESNAELSEKSGMLQAEKKLLEEDVKRWKARNQHLASQQKEPDLEECRKLLSEKEVNT
KRIQQLTEETGRLKAEIARSNASLTTSQNLIQNLREELNKMRTEKETLQKDLEAKVADIQ
EKVKTITQVKKIGRRYKTQYEELKAQHDKVMETSQSSGELLEQQVSVHEVQELKETLNQA
EIKTKSLENQIENLQKTVSEKEAEARSLQEQITQLQSELSRLHQDLQDRTTQEEQLRQHM
TEKEDKTRKALVAAKAKLAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQY
EGRISRLERELREQQERHLEQRDEPQETTSKVPEQQRQITLKTTPASGERGIASTSDPPT
ANIKPTPVVSTPSKVTAAAIAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQ
EAMQSEGPVDHVPVFGSTSGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQI
EPASQELSPSIVEVVQSSPIERPSTSTAVFGTVSATPSSSLPKRAREEEDDSTIETSEQV
SDETIDMPLSKKLKSIPPVGPEDEVTAEESTDGEVDPLVNQDSQDSIGEGVTQGDYTPME
DSEETSQSLQIDLGPLQSDQQTSTSCQDAQSKGDDVIVIDSDDEDDADDENDGEQEDYEE
DDDDDDDDDDDEDTGMGDEGEDSNEGTGSADGNDGYEADDAEGCDGTDPGTETEESTGGE
SSQRAADSHNSGEGSSITESSLPHENSREQPSSASERQGPRAPQSPRRPPHPLPPRLTIH
APPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDG
FAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGG
RSVPTTPLQVAAPVTVFTESTTTDSSEHASQSVPMVTTSTGSLSTTTETGTGDDGDEVFV
ETETEGISSETGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSADTSSSQPKPFRRVRL
QPQTLRTGVRGRQFNRQRGMTHAMGGRGGLNRGNIN
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccgaaacctcagtgaaaagagctctcggctccttggggcgggacgcgggttg
actaggtcgcgtcgagctagcctcagggaggcgggtgtgcgcgtgggtgtagcacgggag
gattcggcgcgggcaccggccccggccccggccgcggcctccctgtccttgccctcggcc
cccctccaacctcccccgctgggagatccggacattggcaacatggcggcggtgctgcag
caggtcctggagcgtcaggagctgaccaaactgcccaagcccgtccaggccaaattggag
aaattcttggcagaccagcagagcgagatcgactgcctgaaggggcggcatgagaagttc
aaggtggagagcgaacaacagtactttgaggtagagaagcggctatcccagtgtcaggag
agacttgtaaatgaaagccgagaatgccaaactttgcgtcaagaactggaaaaactcaat
caacagtttaagtcagtgactgagaaaaacaaagaactggaaactgctcaagatcgacat
gttgctgttcagagccagcttacaagagcaaaggaggaattggaagctgagaaaagagac
ttggtcagaaccagtgagagacgttcacaagaacttgaatatttaactgaggatgttaaa
cgcctaaatgaaaaactcaaagaaagtaacacatcaaaaggagagctacagttaaaacta
gatgaacttcaagcatctgatgtttctattaagtatcgagagaaacgattggaacaagaa
aaggaattactacatagtcaaaacacatggctgaatacagaactaaaaaccaaaactgat
gaactcctggctgttggtagagaaaaaggaaatgaaatcctggaacttaaatgtaatctt
gaaaacaaaaaagaagaggtttccaggatggaggaacaggtgaatggcttgaaaacatca
aatgaacatctacaaaaacatgtggaagagcttctgaccaaattgaaagaggccaaggag
cagcagactagtatggaagaaaagttccacaatgagctaaatgcccacataaagctctct
aacttgtacaagagtgctgctgatgactctgaagcaaaaagcaatgagctaactcgagca
gtggatgagcttcacaagcttttgaaagaagctggagaagctaacaaaggaatgcaagat
catttaatagaagtggaagaatcaaaagcccaaatggaaaaagaaatgctagagaagatt
ggcaaattagagagagaactagaaaatgctaatgatctactctcagccacaaaacggaaa
ggggccatattatctgaagaggagcttgcagctatgtctcctactgcagcagctgtagct
aaaatagtaaagcctggaatgaaactaactgagttgtacaatgcatatgtagaaacacaa
gatcagttactcttagagaaactagagaacaagagaattaataaatatctagatgaaata
gtaaaagaagttgaagcaaaagcaccaattctgaaacgccaacgtgaggaatatgaacgt
gcccaaaaagctgtggcaagtttatctgttaagcttgagcaagcaatgaaggaaattcag
cgattgcaagaggacactgataaagccaacaaacattcatcagtgcttngaagggacaac
caaagaatggaaatacaagtgaaagatctttcacaacagattagagttctcttgatggaa
cttgaagaagcaaggggcaatcatgtcattcgtgatgaagaagtaagttctgctgacatc
agtagttcatctgaagtaatatcacagcacctagtctcctacaggaatattgaagaactc
cagcaacagaaccagcgccttctagtagcacttagggagcttggggagacaagangaaga
gaagaacaagaaacaacttcttcaagaattactgagctgcaaattcagcttgaaagggcc
ctcgctgaattggaacaacttcacgactcacgacagcatcagatgcagcttgttgattca
atagtccgtcagcgtgacatgtaccgcattttgttgtcacagacaacaggagttgtcatt
ccattgcaagcttcaaacttagaggagatttccctgatgtccacacctaaacattcttca
ggtgtgtcacagaccatctccactcctgctccagtttccacagttgagtcaacagaggca
gtggaagccaaggctgcacttaaacagttgcaggaaatttttgaaaactacaaaaaagaa
aagatagagcatgataaaattcaaaatgaacaagtggagaaactgcaggagcaagttgca
gatttacggtcacagcatactaagatttctacacagnttgattttgcttccaaacgctat
gaaatgctacaagataatgtcgagggataccgtcgagaaattacatccttacatgagaga
aaccaaaaactcactgcaacaactcaaaaacaggaacagatcatcaacacaatgactcaa
gatttgagaggagcaaatgagaagttggcagttgcagaagtaagagcagaaaacctgaaa
aaggaaaaggaaatgttgaaattgtcagaagttcgcctcactcagcagagagaatcttta
ttagctgaacaaagaggacaaaatttactactaactaatctgcaaacaattcagggaata
ctggagagatctgaaacagaaactaagcagagacttaataaccagatagaaaagctcgaa
cgtgagatatctcaactgaagaagaaattagaaggtgaagtagaacaaagacacacactt
acaagaaatcaagatgttcaccttttagatacaaagagacagctagagactgaaataaac
cgtcaccttaatacaaaagaactattaaaaaatgctcaaaaggaaactgctacattaaaa
caacaactcaataatgttgaagcccagcttgcttcccagtcagcacagagaagtggaaaa
ggtcagcctagtactaaagaagacatagatgatcttataagtcaactaaggcaagctgaa
gagcagattacatgacctgaaagaaagactcaagacaagtttagtaatgtggaacagtat
cagagctatggttcttagcttagaggaatcctaaacaaggaaaaacaagtgacagaagag
gtacgtaagaatgttgaagctcgtttaaaagactcagctgagtatcggncacaactagaa
aaaaaactaatggaagcagagaaggaaaaacaagaacttcaagatgaaaaatgcagagct
ngtgagagtatggagcagcagctatctgaattaaagaagactctgtccagtgttcaaaat
gaagttcaggaagctcttcagagagcaagcacagctttgagtaatgagcagcaagccaga
cgtgattgtcaggaacaagctaaaatagcaatagaagctcagaataagtatgaacgggag
ctgatgctacatgctgctgatgtggaagctttgcaggctgccaaagaacaagtttctaaa
aacttattagtgcgtcagcagttggaagaaacagctcaaaaagcagaatcacaattgttg
gagtgtaaagcctcttgggaggaaagagagagaatgttaaaggatgaagctgccaagtgt
gtctctcgctgtgaagatttagagaaacaaaataggttacttcatgatcagattgaaaaa
ttaagtgacaaggtcgtgacctctatgaaggaaggtgtgcagggttcattaaatgtatct
ctgaatgaagaaggcaagtctcaagaacaaatcttagaaattctcaggtttatacggaga
gaaaaagaaattgcggaaaccaggtttgaagtggcccaagtagaaagcttgcgttacaga
cagcgggtagagctcctagaaagagagcttcaggagctgcaggatagtctaaatgctgag
agggagaaagtccaggtaaccgcaaaaacaatggctcagcatgaagaactgatgaaaaaa
actgaaacaatgaatgtacttatcgaaaccaataagatattgagggaagaaaaagaaagg
ctagaacaagaactacagcagatgcaagcaaaggtcaggaaactggagttagatatctta
ccattacaagaatcaaatgccgaactgagtgagaaaagtggtatgttgcaagcagagaag
aagttgctagaagaagatgtcaaacgctggaaagcacgtaaccagcatcttgcaagccag
caaaaagagccagatttggaagaatgtcgaaagctcctttcagagaaggaagtaaatact
aaacgcattcagcaattgactgaagaaactggaagacttaaagctgaaattgcaaggtca
aatgcatctttgaccaccagccaaaatttaatccagaacttaagggaagaattaaataaa
atgagaactgaaaaagaaactctccagaaggacttagaagccaaagtagctgatatacaa
gaaaaagtcaaaactattactcaagtcaagaaaattggaagaagatacaagactcaatat
gaagagcttaaggcccaacatgataaggtaatggagacttctcagtcttctggagaacta
ttggaacagcaggtatctgtacacgaagtgcaagagctcaaagaaactttgaaccaagct
gaaatcaaaacaaaatctctagagaatcaaatagagaaccttcagaagacagtatctgaa
aaagaggctgaagctagaagtcttcaggaacagataacacagcttcagtctgaactctca
cgtcttcatcaggatcttcaagacagaactacacaggaggagcagctacggcaacatatg
actgagaaggaagacaaaacaagaaaggctcttgttgcagccaaagcaaagctggcacac
ttagctggtgtcaaagatcaactaactaaagaaaatgaagagcttaaacaaagaaatggt
gcattagatcaacagaaggacgagctggacgtgcgtatgactgctcttaaatcacagtat
gaaggtcgaattagccgcttagaaagggaactcagggaacaacaagaaagacatcttgag
caaagagatgagcctcaggaaaccactagcaaggtccctgaacaacaaagacagatcaca
ctcaaaacaactccagcttcaggcgaaagaggaattgctagtacatcagatccaccaaca
gccaatatcaagccaactcctgttgtgtctactccaagcaaagtgacagctgctgccata
gctgggaataagtcaacacctagagctagtatccgaccaatggttacacctgcaacagtt
acaaatccaaccactactccaacagccacagtgatgcccacaacacaggtggaatctcaa
gaagctatgcagtcagaaggacctgtggatcatgttccagtttttggaagtacaagtggg
tctgttcgttctaccagtcccaatgtccagccctctatctctcagcccattttaactgtt
cagcaacaaacacaggctacagcctttgtgcagcccactcaacaaagtcatcctcagatt
gagcctgctagtcaagaactatctcccagtattgtagaagttgtacaaagttcacccatt
gaaagaccttccacttcaacagcagtatttggtacagtttcagctactccaagttcatct
ttgcctaaacgtgcacgtgaagaggaagatgatagcaccatagagacatcagagcaagtc
tctgatgaaacaatagacatgcctctctcaaagaaattgaaaagcataccccctgtagga
cctgaggatgaagttacggcagaagagagcactgatggggaagttgaccctcttgtaaat
caggattcacaagattctattggagaaggcgtcactcagggagattatactcctatggag
gacagtgaagaaacctctcagtcccttcaaatcgatcttggacccctgcagtcagatcaa
cagacttcaacctcttgccaggatgcccagtccaaaggagatgatgtcattgtgatagac
agtgatgatgaagatgatgctgatgatgaaaatgatggtgaacaggaggattatgaggag
gatgatgatgatgatgatgacgacgatgatgatgaagacacagggatgggagatgaaggt
gaagatagtaatgaaggcactggtagtgcagatggcaatgatggctatgaagccgatgat
gctgagggttgtgatggtactgatccgggtactgaaacagaagaaagtacaggaggtgaa
agtagccagagagctgcagattctcacaatagtggtgaagggagttctattacagaatca
tccctgcctcatgaaaattctagagaacagccatcatcagcatctgaaagacagggtcct
cgggcacctcagtcacccagaagaccaccacacccacttcccccacgactaactatccat
gcgcctcctcaggagttgggaccaccagtccagagaatccagatgacacgaagacagtca
gttggacgagggcttcaactaactcctgggataggtggcatgcagcagcacttttttgat
gatgaggacagaacagttccaagtaccccaactcttgtggtaccacatcgtacagatgga
tttgcagaagcaattcattcacctcaggttgctggtgttcctaggttccggtttggaccc
cctgaagatatgccacaaacaagttctagccactcagatcttggtcagcttgcatctcaa
ggaggtttaggtatgtatgaaacacccctcttcctagcacatgaagaagaatctggtggc
cgaagtgttcctactactcccctacaagttgcagctccagtgactgtatttaccgaaagt
accactactgattcttctgagcatgcatctcaatctgttccaatggtgacaacatccact
ggcagtttatccacgactacagaaacagggacaggagatgatggagatgaagtatttgtg
gagacagaaactgaaggaattagttcagaaacaggcctagaaattgatagccagcaggag
gaagagcctgttcaggcatctgatgagtctgatcttccttctaccagccaagaccctccg
tccagctcctctgcagatactagcagtagtcaacctaagcctttcagacgagtcaggctt
caacctcagactttgagaacaggggtccgaggtcgtcagtttaaccgacaaagaggtatg
acccatgcaatgggaggcagaggaggcctaaacagaggaaatattaattaa
DBGET
integrated database retrieval system
