Trichosurus vulpecula (common brushtail): 118846353
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Entry
118846353 CDS
T10126
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118846353 (TNRC6C)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118846353 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
118846353
NCBI-ProteinID:
XP_036610683
LinkDB
All DBs
Position
4:complement(221699808..221885836)
Genome browser
AA seq
1766 aa
AA seq
DB search
MVGRHLSSDLSHSGLVDHYENSHWGQQPTFRSEANCTWDKVIIDRTDKEAWPSITLTETE
SASECTTDIDSASSCGPENSSMATGSAHGNFTGHTKKNNGNNGANGALVQSTCNQSALGA
GGANGNGNSSRVWGVTTGSSSNLAHCSISSGDGKMDNMIGDGRSQNCWATSNSNAGINLN
LNPNANPAAWPVLGHEGTVATGNPSSICSPVGAIGQNMGNQNGNPTGTLGAWGNLLPQES
TEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNSINAMQTNGLPNWGMAVGIGAIIP
PHLQGLPGANGSSVSQVSGGSGEGISSSVWGMSPGSPATGNNNSGFGQGNGDTVNSALSA
KQNGSSRIDPAVQKEGNGANAWDSGPPAGPGVLAWGRGNGSNGVGNMHSGAWGHPSRSTS
SGVNGEWGKPPNQHSNNDINGKGTMGWDNPSVTNQNPAIQQGNEQLNSWAKAGTSGTATS
EGSNDSSGSQNEGSTGREGAGESRRRDKGIIDQGQVQLPRNDLDPRVLSNTGWGQTPVKQ
NTAWEFEESPRSERKNDNGTEAWGCATTQPSNSGGKNDGSIMNSTNTSSVSGWGNSPSAA
VPANTGWGDNNNKAPNGLGGWGDSISSTAVNNAAAKSGHAWSGTVNQGDKSPTWGEPQKP
KSQNWGDGQKSNPGWTSGGGDWTDSSSVLGNLNDGKKSGSGWDTDNNRSGSSWNDTRSGT
SGWGSGTNAKVNPGTNWGESLKPGPQQNWSNKPQDNNVSNWGGAASVKQTGSGWVGGPVP
AKQKDISEATGWEEPSPPSIRRKMEIDDGTSAWGDPSNYNNKTVNMWDRNNPVIQSSTTT
NTTTTTTTTNSNTNMVESLPSHQSSTQLNRSPLLGPVSTGWGDMPNVHSKTEASWGESSS
PAATVDNGTAAWGKPPSSGAGWGDNSEPSGTFGRTSAPAAAPALCKQASKSMQEGWGSGG
DEMNLTTNQWEDEEGDMWNNAASQESNSSCSSWGNAPKKGLQKGMKTSSKQDEAWIMNRL
IKQLTDMGFPREPAEEALKSNNMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCR
PPISKESSMDRPTFLDKDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASGLGMQ
NLNSSRQIPSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQ
LLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQ
QEQQVARTINNMQQQIQQHQRQLAQALLMKQQQPPPPHLSLHPSAGKSAMESFSPHPQGP
GLPDLQTKEQQSSMNTFAPYPSLAGLNPNMNVNSMDITGGLSVKDTSQSQSRLPQWTHPN
SMDNLSSAASPLDQNPSKHGAIPGGLSIGPPGKSSIDDSYGRYDLIQNSESPASPPVAVP
HSWSRAKSDNDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTI
QDVNRYLLKSGGKLSDIKSTWSSGPVSHTQASLSHELWKVPRNTTAPTRPPPGLTNTKPS
STWGTSPLGWTSSYSSGSAWSTDSSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFH
LNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQPLPPTSS
WQSNTGTNQTRMGSTSSSHGLVRNDAGHWNTPCLGSKGSSDLLWGGVPQYSSSLWGPPST
DDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atggttgggcgacacctttcttcagatctcagtcacagtggattggtagaccattatgaa
aattcccactggggacagcagcctacttttagaagtgaagccaactgcacctgggataaa
gtgataatagataggactgacaaggaggcgtggccttccattacactaactgagaccgaa
tctgcttcagaatgtactacagacattgactctgcctccagctgtggcccagagaacagt
agcatggctacagggagtgcccacggcaacttcactggacatacaaagaaaaataatggc
aataacggcgcaaatggagcactcgtccaaagcacttgtaatcagagcgcccttggagcg
ggcggagcaaacggcaatggaaactcatccagagtgtggggtgtgaccacaggctccagc
tctaatctcgctcactgctccatcagcagtggggatggaaaaatggacaacatgattgga
gatggtagaagtcagaactgctgggctacttccaactcaaacgctggcattaatctgaac
cttaatcctaatgccaacccagccgcctggcctgtacttggacatgaaggaactgtggca
acaggcaacccttccagtatttgcagtccggtcggtgccataggtcaaaatatgggcaac
cagaatgggaacccaacaggcactttaggtgcttggggaaacttgctgcctcaagagagc
acagaaccacaaacgtccacttctcagaatgtgtctttcagcgtacaacctcagaacctt
aacactgatggaccaaataacactaaccctatgaactcttcaccaaactctatcaatgca
atgcagacgaatggactgccgaattgggggatggctgttggtataggggccatcatccca
ccccatctgcaaggccttcctggtgctaatggatcatcagtttctcaagtcagtgggggc
agtggtgaaggaattagcagttcagtgtgggggatgtccccaggtagtcctgccacagga
aataataattctgggttcggtcaggggaatggagacactgtgaactcagcattaagtgct
aaacaaaatggatccagcagaatagatccagctgtgcagaaggaagggaatggagcaaat
gcatgggattcagggcctcctgctggtcctggagttctcgcctggggaaggggcaatggc
agcaatggtgttggtaatatgcattctggagcttggggccaccccagccgtagcacctca
agtggtgtgaatggggaatggggaaagcccccaaaccagcattccaataatgacatcaat
gggaaaggaacgatggggtgggataaccctagtgttaccaaccagaatcctgccatacaa
cagggcaatgaacaactaaactcttgggccaaagctggcacttctggcactgcaacaagt
gaaggaagtaatgacagttctggaagtcaaaatgaaggaagcactgggagggaaggagct
ggagagagccgacggagagataaaggaattatagaccaagggcaagtccagttgccaagg
aatgatcttgacccaagagtactgtccaataccggttggggacagactcctgtaaagcaa
aacactgcctgggaatttgaggaatcccctaggtctgagcgaaaaaatgacaatgggacg
gaggcctggggttgtgcaactactcagccttcaaactcaggggggaagaatgatgggtcc
atcatgaacagtacaaatacctcttcagtatctgggtggggcaactcaccctctgctgct
gttccagcaaatacaggttggggagacaacaacaacaaggcaccaaatggcctcgggggt
tggggggactcaataagctctactgctgtcaataatgctgctgccaaaagtggccatgct
tggagtgggactgtaaatcagggggacaaatcacctacctggggtgaacctcagaaaccc
aaatctcaaaactggggagatggacaaaagtccaatccaggctggacttcagggggggga
gattggacagattcgtcgtctgtccttggaaatttgaatgatggaaaaaagagtggatca
ggatgggatactgacaataatcgatcaggttctagttggaacgatacaagatctgggacc
agtggatggggtagtggcacaaatgctaaagttaatccaggtacaaattggggggagtct
ttaaagcctggtccccagcaaaactggtctaataaaccccaagacaacaatgtgagtaac
tggggaggagctgcttctgttaaacagactggatcaggatgggttggtgggccagtgcca
gccaaacagaaggacattagcgaggctacgggttgggaagaaccttctcctccctccatt
cgacgtaagatggaaatcgatgatggtacctcagcttggggtgacccaagcaattacaac
aataaaactgtaaacatgtgggatagaaacaatcctgtaatccagagcagtaccacaacc
aataccactaccaccaccaccaccaccaatagcaacacaaacatggttgaaagtctacca
tcacaccagtcaagcactcagctcaatcgatctccgctgcttggtccagtttcaacaggc
tggggagacatgcctaatgttcattcaaagactgaagcttcttggggagagtcatcatct
cctgctgctacagttgataatggcacagcagcttggggaaagccacccagcagtggtgca
ggatggggagataattctgagccatcagggacatttggaagaacaagtgccccagctgct
gccccagccctgtgcaaacaagcttcaaaatctatgcaagaaggctggggcagtggtggg
gatgaaatgaacctcactaccaatcagtgggaagatgaagaaggagatatgtggaataat
gctgcttcacaagaaagcaactcctcctgcagttcctgggggaatgccccaaagaaagga
cttcagaagggcatgaagacatctagcaagcaagatgaggcctggatcatgaaccgactg
attaaacaactcacagacatgggctttccgagagagccagctgaagaagctttgaagagt
aacaatatgaatcttgatcaggccatgagtgctctgctggaaaagaaggtggaaatggac
aagcgtggaatgggagtgactgactataatggaatggtcaccaaaccccttggctgccgc
ccaccaatctccaaagagtcttccatggaccgccccacctttcttgacaaggatggcggc
ctagtggaagagcccactacttcaccatttttgccttcaccaagcctgaagctccccctt
tcaaacagtgcactccctaatcagaccctgggtgggattgcctcagggctgggcatgcaa
aacttgaattcttctagacagataccgagtggcaatctgggtatgtttggcaatagcgga
gcagcacaagccaggaccatgcaacagccgcagcaaccgccagtacaacctcttaactca
tcccagcctagtcttcgtgctcaagtgcctcagtttctatcccctcaggttcaagcacag
cttttgcagtttgcagcaaaaaacattggtctcaaccctgcactattaacctcgccaatt
aatcctcagcatatgacgatgttgaaccagctctatcaactgcagctggcataccaacgt
ttacaaatccagcagcagatgttacaggcccagcgtaatgtttccggaccgatgagacaa
caagagcagcaagttgcacgtacaatcaataacatgcagcagcagatccagcagcaccag
cgccagctggcccaggccttgctcatgaaacagcagcagcctccccctccacatctctct
ttgcacccctctgcaggcaaatcagccatggagagcttttcaccccatccccagggtccc
ggcctacctgacctgcagaccaaagagcaacagtcttcaatgaacacctttgctccttac
ccaagtctcgctggactgaacccaaacatgaatgtaaacagcatggacattactggtggt
ttatcagtgaaggacacttctcagtctcagtctcgccttcctcagtggacacaccctaat
tcaatggataatttatccagtgctgcttctccacttgatcagaaccctagcaagcatggt
gctatccctggaggcttaagcattgggcctccgggtaagtcctccattgatgactcttat
ggccggtatgatttaatccaaaacagtgaatcaccagccagccctcctgtagccgttcct
cacagctggtcacgtgccaaatctgataatgataaaatctcaaatggttccagcattaac
tggccaccagaatttcatcctggagtgccatggaaaggacttcagaatattgaccctgag
aatgatcctgatgtcactccgggaagcgtccccactggacctacaattaatacgacaata
caggatgttaatcgttaccttctcaaaagtggaggtaaactgtcagacattaaatctaca
tggtcctccggcccagtttctcacacacaagcctctctgtctcatgaactgtggaaggta
cccagaaacactactgcacctactagacctcctccaggcttaacaaacaccaagccctct
tctacttggggtaccagtccacttggctggaccagctcttactcctctggttctgcctgg
agcactgacagttcaggaagaacgagcagctggctggtcctccgtaacctcacgccccag
attgatggttctacactgaggactttgtgtttgcaacatggtcctctaattacattccac
ctgaacctgactcaaggaaatgctgtggtccggtatagttccaaggaagaagctgccaaa
gctcagaagtctctgcatatgtgtgtcctaggaaacactaccatactggctgagtttgct
ggtgaagaggaagtaaaccgtttcttagcacaaggccaaccactgccacccacctccagt
tggcagtccaacactggaaccaatcagactcgtatgggctccacaagcagttctcatgga
ttggtgcgaaatgatgcgggccactggaacaccccatgcctgggaagcaaaggaagcagt
gatctgctctggggtggagttcctcagtactccagcagcctttggggccctccaagcacc
gacgatggcagagttattggaagccctacacctttaaacactctgcttcctggtgacctt
ctcagtggggagagtatctag
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integrated database retrieval system
