Trichosurus vulpecula (common brushtail): 118846415
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Entry
118846415 CDS
T10126
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118846415 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118846415 (DHX36)
03012 Translation factors [BR:
tvp03012
]
118846415 (DHX36)
Enzymes [BR:
tvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118846415 (DHX36)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118846415 (DHX36)
Translation factors [BR:
tvp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
118846415 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
ATPase
AAA_14
NACHT
AAA_23
NPHP3_N
ABC_tran
Motif
Other DBs
NCBI-GeneID:
118846415
NCBI-ProteinID:
XP_036610830
LinkDB
All DBs
Position
4:complement(226995387..227045635)
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AA seq
1012 aa
AA seq
DB search
MSYEHRQNWGRDGGGPRGSSGGGYGGNRGGGGGRGGGGGGGGGGGGGRGRHPGHLKGRDI
GLWYARKQGQKSKDAERQERAVVRMDERREEQIVQLLNSVQTKNDKDFQPQISWFSPEDH
GYGTEIPIQNKPTSEKKFLEKEKKTLDQEKKFIDRGKKLTDRGKSFVDRDSEYLLQENEP
DVDLDQQLKEDLKRKKSDPRYIEMQHFREKLPSYGMQKELVNLINNNQVTVISGETGCGK
TTQVTQFILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAEPCGSGHSTGYQIRL
QSRLPRKQGSILYCTTGIILQWLQSDPQLSSVSHIVLDEIHERNLQSDVLMTVIKDLLTF
RPDLKVILMSATLNAEKFSEYFDHSPMIHIPGFTFPVTEYLLEDVIEKIRYTPENTDRKP
QFKRGFMQGHINRPEKEEKEAVYKERWPDYVRQLRGRYSANTIDVLEMMDDEKVDLNLVA
ALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQV
FKRTPPGVRKIVIATNIAETSITIDDVVHVIDGGKIKETHFDTQNNISTMAAEWVSKANA
KQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLS
RLMDPPSHDAVLLSINHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLD
PVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLTVVNAFEGWEEARRRGFRF
EKDYCWEYFLSSNTLQMLHNMKAQFAEHLLAAGFVSSKNPKDPKSNINSDNEKIIKAVIC
AGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEESEFHYNWLIYHLKMRTSS
IYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKELRKELDAL
LQEKIENPHPVDWKETQSRDCAVLSAILDLIKTQENGTPRNFSPRFQDGYYS
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcaccgccagaactggggccgcgatggcggcgggccccgcggctcgagc
ggcggcgggtacggggggaaccgcggcgggggcggcggccgaggtggcggaggcggtggc
ggcggcggaggcggaggaggccggggccggcatcctggacacctcaaaggccgcgacatc
ggcctgtggtacgcgaggaagcagggccagaagagcaaggatgccgagcgccaggagaga
gctgtagtgcggatggatgaacgtcgagaagaacaaattgtacaactgttgaattctgtc
caaactaagaatgacaaagattttcagccacagatatcctggttttctcctgaggatcat
ggatatggtactgaaattcccatccagaacaaaccaacttcagaaaagaaatttttggaa
aaggaaaagaaaactttggatcaagaaaagaagttcatagaccgagggaagaaattgact
gacaggggaaagtcatttgtagatagagattctgaatatctcttgcaagagaatgaacca
gatgtggatttagaccagcaacttaaggaagacctgaaaagaaagaagtctgatccccgc
tacattgaaatgcagcatttccgtgagaagctgccctcatatggaatgcaaaaggaattg
gtaaatttgataaataacaatcaggttactgtcataagtggcgagactggttgtgggaaa
accacccaagttactcagttcattctagatgactatattgaaagaggaaaaggatccgcc
tgtcggatagtgtgtacgcagcccagaagaatcagtgcaatttcggttgcagaaagggta
gctgcagagagagctgagccgtgtggcagtggccacagtacggggtaccagatccgcctc
cagagccggctgccaaggaaacaaggttccattttgtactgtacaacagggatcatcctt
cagtggctccagtcagatccgcaattatccagtgttagtcacattgtacttgatgaaatc
catgaaaggaatctgcagtcagatgttttaatgactgttattaaagatctcctaaccttt
cgacctgacctgaaagtaattctgatgagtgcaactttgaatgctgagaagttttcggaa
tattttgatcatagtccaatgattcacatacctggttttacattccctgttactgaatat
cttttagaagatgtgattgaaaagataaggtatacaccggaaaatacagatcgcaaaccc
cagtttaagaggggttttatgcaaggtcacataaatagaccagaaaaagaagaaaaggaa
gcagtttataaagaacgctggccagactatgtaaggcagttgcgaggaaggtattcagca
aataccatagatgttttagaaatgatggatgatgagaaagttgatctgaatttagttgct
gcacttatccgacacattgttttggaagaagaggatggtgcgatcttggtattcctccct
ggttgggacaacatcagcactttgcacgatctcttgatgtcccaagtcatgtttaaatca
gataggttcataataatacctttgcattcattgatgcctaccgttaaccagacacaggta
tttaaaaggacccctcctggtgttcggaaaatagtcattgctacgaacattgcagaaact
agtatcaccatagatgatgtcgttcatgtgatcgatggaggaaaaataaaagaaactcac
tttgacacccagaataacatcagtacgatggcggcagagtgggttagtaaggccaacgcc
aagcaaaggaaaggccgagccgggagagttcaaccaggtcactgctatcatctgtataat
ggtcttcgagccagccttctggatgactatcagttaccagaaattttgaggacaccgtta
gaagaactgtgtttacaaataaagattttaaagctgggcggaattgcttatttcctaagc
aggttaatggacccaccatctcatgatgctgttttactgtctataaatcatctaatggaa
ttgaatgctttggataagcaagaagaattgacccctcttggagtccatttagcgcgattg
ccagttgagccacatattggaaaaatgattctctttggggcccttttctgctgtttagac
ccagtcctcaccattgcggctagtctcagcttcaaggatccctttgtcattccactgggc
aaagaaaaagtagccgatgccaggagaaaggaattgtcaaagaacacgaagagtgaccac
ttgacggtcgtgaatgcttttgagggatgggaagaggcaaggaggcgtggtttccggttt
gaaaaggactattgctgggagtattttctctcctcaaacacgcttcagatgctgcacaac
atgaaggcacagtttgctgagcaccttcttgcagctggatttgtaagcagcaagaacccc
aaagatcccaaatcaaatattaattcagataatgaaaagataattaaagctgttatctgt
gctggcttatatcccaaagttgctaaaatccggccaagttttagtaaaaaaaggaaaatg
gtaaaagtttgcaccaaaactgatggaacagttaacattcatcccaaatctgttaatgtt
gaagagtccgagttccactataactggctgatctatcacctgaagatgagaaccagcagc
atatatttatatgactgcacagaggtgtctccctactgtctcttattctttggaggtgat
atttccatccagaaggataaagatcaagatactattgctgtagatgaatggatcgtcttc
cagtctccagcaagaattgcccatcttgttaaggaactaagaaaagaacttgatgccctt
ttgcaagaaaagattgaaaaccctcatcccgtggattggaaagagactcagtccagagac
tgcgctgtactgtccgctatcctagacttgatcaaaactcaggaaaatgggacccccagg
aacttttccccccgattccaggatggatactacagttga
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