Trichosurus vulpecula (common brushtail): 118846442
Help
Entry
118846442 CDS
T10126
Symbol
RANBP2
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03013
Nucleocytoplasmic transport
tvp03250
Viral life cycle - HIV-1
tvp05014
Amyotrophic lateral sclerosis
Brite
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118846442 (RANBP2)
Chaperones and folding catalysts [BR:
tvp03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
118846442 (RANBP2)
Ubiquitin system [BR:
tvp04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
118846442 (RANBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_2
TPR_1
TPR_14
TPR_CcmH_CycH
TPR_16
ARM_TT21_C
TPR_11
TPR_7
TPR_8
ANC1_spectrin
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
118846442
NCBI-ProteinID:
XP_036610885
LinkDB
All DBs
Position
4:complement(394874310..394951985)
Genome browser
AA seq
3002 aa
AA seq
DB search
MRRSKAEVERYIASVQGSAPSPREKSMKGFLFAKLYYEAKEYDLAKRYISTYLNVQERDP
KAHKFLGLLYEAEGNIDKAVGCYKRSVELNPTQKDLVLKIAELLCENGPTDGRAKYWVER
ASKLFPGNPTIYRLKEQLLDCKGEDGWNQLFDLIQSELYARPDDVYVNIRLVELYRSNKR
LKDAVAHCCEAERNLALRTSLEWYACVVRTLKEYLESLQCLEANKSNWRATNKDLLLAYA
NLMLLTLSTRDVQESRELLESFDDALQSVKSFMSGNDDLSITFLEMKGHFYMHAGTLLLK
MAQHSEVQWRALSELAALCYLIAFQVPRPKTKLMKGENAGQNLLEMMAYDRLSQTGHMLL
NLSHGKQDFLKEVVESFANKSGQSALYDALFDSQSPKDKSFLGSDDIRSVSTQTPEPEEL
ARYDIGAIRAHNGSLQHLTWLGLQWSSLSTLPAIRKWLKQLFHHLPQETSRLETNAPESI
CLLDLEVFLLGVIFTSHLQLQEKSNFHYNSHQPPCLPLPVCKQLCTDRQKSWWDAAYNLI
HRKAVSGTSAKLRLLVQHEINTLRGQGKHGLQPAMLVHWAKSLQKTGSGLNSFYDQREYI
GRSVHYWKKVLPLLKTIKKKSNIPEPIDPLFKHFHSADIQVSEVGEYEEEAHITFAMLDA
VDGKTEDALSAFEAIKNVVSYWNLALIFHRKAEDIENDALSPEEREECKNYLRKTRDYLI
KISDESCTDPAVAKKLPVPLESVKEMLNSVMQELEEYSEPHCKNGSPRNIDSEIKHSTPS
PTKFSLSPSKSYKFSPKTPPRWAEDQNSLLKMICQQVEAIKKEMHELKLNSSNSTMSPHR
WPPEAYGTDSVPDGYQGSQNYHGAPLTVATTGPSVYYSQSPAYNSQYLLRTAANVTPTKA
PVYGMNRLTPQQHIYAYPQQMHTPPVQNPPACMFSQEMYGPPFRFDSPATGILSPRGDDY
FNYNVQQTSTNPPLPEPGYFTKPPIVSHPSKSAESRVIEFGKSNFGQPMPGEGVRQPFTT
SSQATQPTTFKFNSNFKSNDGDFTFSSPEVVGHPPPATFGNSESLLGLLTSDKPSHDDSY
SAAKPIPSHTGAPRNTFSFGSKNISNVSFTEGMGHSQCKNSLFGRNDDVFTFQSPGKTVF
GTPTPDLANKSHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLF
RFDAESKEWKERGIGNVKILRHKVSGKIRLLMRREQVLKICANHYINPDMKLTPNAGSDK
SFVWHALDYADESPKPEQLAIKFKTPEEAAHFKRKFEEAQEILRASASDTSTGNQNVRVL
KDTKSQDSKDTGKPDPGHPNFGFQISRKDGLWDCDSCSVKNVATAKKCVSCKNLNPNNKE
LLGPPLVENTPAFKPGTEKTQEGFGLMFAKKEGHWDCSVCLVRNEPTASKCIACQNTNTT
NKSVPSFSQQASFKFGQGELSKPITSDLGTLFPKKDGQWNCSVCLVQNEVNDKKCVACQN
PQSQPSFTIPAPTALKFSTSETSKSAKGGFEGMFTKKEGQWDCSVCLVRNESSSFKCVAC
EAPNPVGKPVAEASSDVTFGFKSKLSEPSGSQMARGFKCDFSEKGFKFGSTEQGFKLGHV
VQGSSPSSFTFQAPSSTDAKPTKEGFSFTMPAPAGGFKFGIQESGDQKGSEKSSEGDAAS
KSHDANDKQNNSDSVFGHSSSNFTFADLAKSGEGFQFGKKDPNFKGFSGAGEKLFSSQSA
KMSPKANTSSDLEKDDDAYKTEDNDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFR
FDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRA
WMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRAA
KLIQRAEEMKSGLKDLKTFLTNDKKLTEEENNNSSLAVSTSDLTAKPHGETTGPSLEWDN
YDLREDALDDSVSSSSVYASPLSNSPVRKNLFRFGDSTTGFNFSFKSALSPSKSPAKLNQ
SGTSVGTDEESDVTQEEEKDGQYFEPVVPLPDLVEVSSGEENEQVVFNHRAKLYRYDKDA
GQWKERGIGDIKILQNYDNKHVRIVMRRDQVLKLCANHRVTPDMTLQNMKGTERVWVWTA
CDFADGERKVEQLAVRFKLQDVADAFKQIFDEAKQAQEKDVLLTPYFSRAATPREFPCGK
MAVAVLEETTRERTDLNQGSDTADTMVEVGEVCSTSETPTKAVVSPPKFVFGSESVKSIF
SSEKSKPFAFGNNSATGSLFGFSFNAPLKNKSGEDVSGEIERNLERSKCEAQKSSDIKPF
ADNKADKPLTPFPKEEPSANYAFKTLEKGFNFSLFKSNPMAFWTSTPSSQPESKAETKKE
TEELSTDDVLVVYELTPTPEQKALAVNLKLPPTFFCYKNRPDYISEEEDDDEDFESAVKK
LNGKLYPDDPDECKGSQEFVTGEVVPDLDKECVIVWEKKPTSEEKAKAETLKLPPTFFCG
VCSDTDEDSSHPEDFNSEVQKVQEAKKLHDDEVTSSTDTTSTRETKVPASFICKSEEPDS
TTESSDAVHSSSGANDTPVDLSNKKENEADSTSQEVESRTVSFGFGTSPGLSFADLASGN
SGDFAFGSKDKNFQWANTGAAVFGKHAISKGGEDEEGSDEEVVHNEDIHFEPIVSLPEVE
VKSGEEDEEILFKERAKLYRWDRDVLQWKERGVGEIKILFHTMKNYYRILMRRDQVFKVC
ANHVITKAMELKALNVSNNALVWTATDYADGEAKVEQLAVRFKTKEMSDSFKKRFEECQD
NLSKLQKGQVSLVAELSQETNPVVFFEIFADDEPLGRITMELFSNIVPQTAENFRALCTG
ERGFGYRNSIFHRVIPDFVCHGGDITKNDGTGGRSIYGNAFEDENFTVKHTTPGLLSMAN
RGPDTNNSQFFILLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGVVSKRIMITECG
QI
NT seq
9009 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcagcaaggccgaggtggagcggtacatcgcctcggtacagggctccgccccc
tcgcctcgagagaagtcaatgaaaggattcctttttgctaagctatattatgaagctaaa
gaatatgatcttgctaaaagatatatatctacttaccttaatgtacaagagagggatcct
aaagcacacaagtttttgggtcttctctatgaagctgagggaaacattgacaaggctgtt
ggatgttacaagcgttcagtagaattaaacccaacacaaaaagaccttgtgctcaagatt
gcagaattgttgtgtgaaaatggtcctactgatggaagggcaaaatactgggttgaaaga
gcttctaagcttttccctggaaaccctacaatctataggttgaaggagcagcttttagat
tgtaaaggtgaagatggatggaatcagctttttgacttgattcagtcagagctctatgca
agacctgatgatgtgtacgtgaacatccgattagtagagctgtacaggtcaaataagaga
ctgaaagatgctgtggcccactgctgtgaggcagagagaaatctagccttgagaacaagc
ttggaatggtatgcatgtgttgtacggacacttaaggaatatctggagtctttacagtgt
ttggaggccaataaaagcaactggcgagcaaccaataaagacttacttctggcctatgcc
aaccttatgcttcttacactttctactagagatgtgcaggaaagtagagaattactggaa
agcttcgatgatgcacttcagtctgtgaaatcttttatgagtgggaatgatgacctatca
attactttccttgaaatgaaaggtcacttctacatgcatgctggtactctgcttttgaaa
atggctcagcatagcgaggtacaatggagagctctatctgaattggcagccttatgctat
ctcatagcatttcaggttccaagaccaaagacaaaattaatgaaaggagaaaatgctgga
caaaatttattggaaatgatggcctatgatcgtctgagccagactggacatatgctgctt
aatttaagtcatggcaagcaagacttcttaaaagaggttgtggaatcatttgctaataag
agtggacagtctgctttatatgatgccttgttcgatagtcagtcacctaaagataaatca
ttcttgggtagtgatgatatcagaagtgttagcacacaaaccccagaacctgaagaactg
gctagatatgatattggggctattcgagcacataatggtagccttcagcacctcacttgg
cttgggttacagtggagttcattgtctaccttacctgcaatccgaaaatggctaaaacag
ctttttcatcatttgccacaagaaacctcaagacttgaaactaatgcccctgagtcaatt
tgtttattagatcttgaagtgtttctacttggggtgatatttaccagccacttacaatta
caagagaaatccaattttcactacaattcacatcagcctccatgcttgccactacctgta
tgcaaacagctttgtacagaccgacaaaagtcctggtgggatgcagcttataatcttatt
cacagaaaagctgtatctggaacctctgcaaagttgcgccttctagttcagcatgaaata
aacacactaaggggtcaaggcaaacatggtcttcaacctgctatgcttgtacattgggca
aaaagtcttcagaaaacaggcagtggacttaattccttttatgatcagcgggaatacata
ggaagaagtgttcactattggaagaaagttttgccattattgaagacaattaaaaaaaag
agcaatattcccgaacccatcgatcctctcttcaaacatttccatagtgcagatattcag
gtgtctgaagttggggaatatgaggaagaagcacacataacatttgctatgttggatgca
gttgatgggaaaaccgaagatgcattgtcagcatttgaagctattaaaaatgttgtttcc
tattggaatcttgccctgatttttcataggaaagcagaagacatcgagaatgatgctctt
tccccagaagaacgagaagaatgcaaaaactatttgaggaaaactagagactacttaata
aagatttcagatgaaagttgcacagatcctgctgtagctaagaagcttccagttcctttg
gagtctgtaaaagaaatgcttaattcagtaatgcaagaacttgaggaatatagtgaacct
cattgtaaaaatggttctccccgaaatatagattctgaaataaaacattctacaccgtct
ccaaccaaattttctttgtcaccaagtaaaagttacaagttttctcctaaaactcctcct
cgatgggcagaagatcaaaattctttattgaaaatgatctgccagcaagtagaagccatt
aagaaagaaatgcatgagttgaagctaaacagcagtaattctactatgtctccacaccgt
tggcctccagaagcctatggaacagattcagtgcctgatggctatcagggatcacaaaat
taccatggagctccactaacagttgcaactactggcccttcagtgtattacagtcagtcc
ccagcatataattcgcagtatcttctcagaacagcagctaatgttacaccgacaaaggct
ccagtttatggcatgaaccggcttacacctcaacagcacatttatgcttatccacaacaa
atgcatacacctccagtgcaaaatccacctgcttgtatgttctctcaagaaatgtatggt
cctccatttcgttttgattctcctgcaactggaattctgtcaccacgaggagatgattac
tttaattataacgttcagcagacaagcacaaatccacctttgcctgaaccaggttatttc
acaaaacctccaattgtatctcacccttcaaaatctgcagaatccagggtcatagaattt
gggaaatctaactttggacagcctatgccaggtgaaggagtgaggcaaccttttacaaca
tcgtcacaagcaacacaaccaactacctttaaatttaactccaattttaaatccaatgat
ggtgactttacattttcatcacctgaagttgtggggcaccctcctcctgcaacttttggt
aacagtgagagcctcctaggtctcctaacttcagataagccttcacacgatgatagctac
agtgcagcaaaaccaattcctagtcacacaggtgcaccaaggaatacattcagttttggt
agcaaaaatatttctaatgtttcatttacagaaggcatgggacacagtcaatgtaaaaat
tctctttttggtcgtaatgatgatgtgtttactttccaaagtccaggcaaaacagtattt
gggacaccaactccagacttggcaaacaagagtcatgaaacagatggaggaagtgcccat
ggagatgatgatgatgatggccctcactttgaaccagtagttccacttcctgataagata
gaagtgaaaaccggtgaggaagatgaagaagaattcttttgtaatcgtgcaaaattgttc
cgctttgatgcagaatccaaagagtggaaggagcgaggtattggcaatgtgaagatactg
aggcataaagtatctggcaaaattcgtcttctcatgagacgagagcaagtactcaaaatc
tgtgcaaatcattatataaatccagatatgaaactgacacccaatgctggctcagataaa
tcatttgtatggcatgctcttgactatgcagatgagtctccaaagccagagcaacttgct
attaagtttaaaactccagaggaggcagcacatttcaaacggaagtttgaagaggcccag
gaaatcttaagagcttcagcttcagatacttccacaggaaatcaaaatgttagggttttg
aaagacaccaagagccaggatagcaaggatactggaaagcctgacccaggacatccaaat
tttggtttccaaatttcaaggaaagatgggctgtgggattgtgatagttgttcagtaaag
aatgttgcaacagcaaagaaatgtgtatcatgcaaaaacctaaatccaaataacaaggag
cttttgggtccaccattagttgaaaacactccagcttttaagcctggcacagaaaagact
caagaaggatttggattaatgtttgctaagaaagaaggtcactgggattgcagtgtgtgt
ttagtgaggaatgaaccaacagcatctaagtgtatagcttgccagaatacaaacacaacg
aataaaagtgttccatcatttagtcagcaagcttccttcaagtttggccagggagagctt
tctaagcctattaccagtgatttgggaactctgtttcctaagaaggatggccagtggaat
tgtagtgtgtgtctggtacagaatgaagtaaatgataaaaaatgtgttgcttgtcagaat
ccacaaagtcaacccagtttcacaattccagcacctactgccttgaaatttagtacttca
gagaccagcaagtctgctaagggtggatttgagggaatgtttactaagaaagaaggacag
tgggactgtagtgtttgcttagtacgaaatgaaagctcttccttcaaatgtgtggcctgt
gaagcaccaaatccagtcggtaaacctgttgcagaagcttcttcagatgttacatttggt
ttcaaaagcaaattatctgaaccttctgggagtcagatggcacgtggttttaagtgtgac
ttttcagaaaaaggttttaaatttggcagtacagagcagggttttaaacttggtcatgtc
gtacaaggaagctcaccttcttccttcacatttcaagctccctctagtacagatgctaag
cccacaaaagaaggatttagttttactatgcctgcacctgctggtggatttaaatttggc
atacaagaatctggtgatcaaaagggtagtgagaagtccagtgaaggagatgctgcttcc
aagtctcatgatgctaatgacaagcaaaataatagcgattcagtttttggacacagtagt
agcaatttcacttttgctgaccttgcaaagtcaggggaaggatttcagtttggcaaaaaa
gatccaaattttaaaggattttcaggtgcaggtgaaaaacttttttcgtcacaaagtgct
aaaatgtcccctaaggccaatacgtcgtcagaccttgagaaagatgatgatgcatataag
actgaggacaatgatgatatccatttcgaacctgtagttcagatgcctgaaaaagtggag
cttgtaacaggagaagaagatgaaaaggttctatattcacaaagggtgaagttatttaga
tttgatgcagagataagccagtggaaagaaaggggcctaggaaatttgaagattcttaaa
aatgaagtcaatggcaaactaagaatgctgatgcgacgagaacaagtactaaaagtatgt
gctaatcattggatcactacaacaatgaaccttaaacctttatctggttcagacagagca
tggatgtggctagccagtgacttttctgatggagatgctaaactcgagcagttggcagct
aagtttaaaacaccagagctggccgaagaattcaaacagaaatttgaagaatgccaaaga
cttttactagacataccacttcaaacgcctcataaacttgtagatactggcagagctgcc
aaactaatacagagagccgaagaaatgaaaagtgggctaaaagatctcaaaacatttttg
acaaatgacaaaaagctcactgaggaagagaataacaactcaagtttagcagtcagtact
tcggacttaacagcaaaaccacatggtgaaaccactggaccttcattagaatgggataac
tatgacttaagagaggatgctttggatgatagtgtaagtagtagttcagtatatgcatct
ccattatcaaatagtcctgtgaggaaaaatctcttccgctttggtgattcaacaacagga
tttaatttcagttttaaatctgctttgagtccatccaagtccccagccaagttgaatcag
agtggaacttctgttggcactgatgaagagtctgatgttacccaagaagaggagaaagat
ggacagtactttgagccagtggtaccattacccgatctggtagaagtgtccagtggtgag
gaaaatgagcaagttgtttttaatcatcgggccaaactctatagatatgacaaagatgct
ggccagtggaaggaaagaggtataggagacataaagattttgcagaattatgataataaa
catgtgcgaatagtgatgcgaagagaccaagtattgaaattgtgtgccaatcatagagta
acaccagacatgactctgcaaaacatgaaagggacagaaagagtttgggtttggactgct
tgtgactttgctgatggagaaagaaaagtagaacaactagctgtccgttttaaactacag
gatgttgcagatgcattcaaacaaatttttgatgaagcaaaacaggcccaagaaaaagat
gtcttgctaacgccatacttttcccgtgctgccactcctagagaattcccatgtggtaaa
atggcggtagccgtattagaagaaaccacaagggagagaacagatttaaaccagggttcc
gatacagcagatacaatggtagaagttggagaagtatgtagcacttctgaaacaccaacg
aaagcagttgtttctcctccaaagtttgtttttggctctgaatctgttaaaagtattttt
agtagtgagaaatcaaaaccatttgcctttggcaacaactcagctacaggttctttattt
ggattcagctttaatgcacctttgaaaaacaaaagtggggaagatgtttcaggtgagatt
gaaagaaatttggaacgtagtaaatgtgaagcgcagaagagctcggacatcaagccattt
gcagacaacaaagcagacaagcccttgactccttttccaaaggaagagccctcagctaac
tatgcatttaaaacgttagaaaagggatttaattttagtctttttaaatctaatccaatg
gctttttggaccagtaccccttcctcacagcctgagagcaaagctgagacaaagaaggaa
acagaagaactttctacagatgatgtactcgttgtatatgaactaactcctactcctgaa
caaaaagctcttgctgtcaatcttaaacttcctccaacttttttctgctataagaataga
ccagattacataagtgaggaagaagatgatgatgaagattttgaatcagctgtcaagaaa
cttaatggaaagctatatccagatgacccagatgaatgtaaaggatcccaagaatttgta
acaggagaagtcgttccagaccttgataaagaatgtgtgattgtctgggaaaagaaaccg
acatctgaagaaaaagcaaaagcagaaactctaaaacttcctcctacttttttctgtggt
gtttgcagtgataccgatgaggatagcagccatccagaggactttaactcggaggttcag
aaagtccaggaagcaaaaaaattgcatgatgatgaagttacaagttcaactgatacaaca
tctactagagagactaaagttcctgcttcattcatatgtaaatctgaagaacctgactct
actactgaatcttctgatgcagtacacagttcatctggggctaatgacacacctgtagac
ttatctaataaaaaagaaaatgaggcagactccacaagccaagaagtagaaagcagaaca
gtatcatttggatttggtactagtccaggattgtcatttgcggatttggcttctggtaat
tctggggattttgcttttggttcaaaagataaaaatttccagtgggcaaatactggagca
gctgtgtttgggaagcacgcaatcagtaaaggtggagaagatgaagaaggtagtgatgaa
gaagttgtacataatgaagatatacattttgagccaattgtgtctttaccagaggtggaa
gtgaaatctggagaagaagatgaagaaattttgtttaaagaaagagctaaactttacagg
tgggacagagatgttcttcagtggaaagagaggggagttggagagataaagatccttttc
catacaatgaagaactattatcgaatccttatgagaagagaccaagtctttaaagtttgt
gcaaatcatgttattaccaaagcaatggaattaaaggccttaaacgtttcaaacaatgct
ttagtttggactgctacagactatgcagatggagaagcaaaagttgaacagcttgcagtc
agatttaaaactaaagaaatgtctgattcttttaagaagagatttgaagaatgtcaggat
aatttatcaaaactgcagaagggacaagtatcacttgtagcagagttgtcacaggaaaca
aatcctgtggtattttttgaaatatttgctgatgatgaacctctgggacgtatcactatg
gaactattctcaaacattgtaccccaaactgctgagaacttcagggcactgtgcacagga
gaaaggggctttggttacaggaactcaatttttcaccgtgtaattccagattttgtttgc
catggaggagatatcaccaaaaatgatggtacaggaggacggtccatttatgggaacgca
tttgaagatgaaaactttacagtgaaacatactactcctggtttattgtcaatggctaat
cgtggcccagacaccaataattctcaattttttatccttctgaagaaagcagaacatttg
gactttaagcatgtagtatttggatttgttaaagacggcatggatactgtgaaaaaaatt
gaatcatttggttctcctaaaggtgtggtgagcaaaagaattatgatcacagagtgtgga
caaatataa
DBGET
integrated database retrieval system
