Trichosurus vulpecula (common brushtail): 118846493
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Entry
118846493 CDS
T10126
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04151
PI3K-Akt signaling pathway
tvp04382
Cornified envelope formation
tvp04510
Focal adhesion
tvp04512
ECM-receptor interaction
tvp04820
Cytoskeleton in muscle cells
tvp04926
Relaxin signaling pathway
tvp04933
AGE-RAGE signaling pathway in diabetic complications
tvp04974
Protein digestion and absorption
tvp05146
Amoebiasis
tvp05165
Human papillomavirus infection
tvp05200
Pathways in cancer
tvp05222
Small cell lung cancer
Brite
Exosome [BR:
tvp04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118846493 (COL4A2)
Glycosaminoglycan binding proteins [BR:
tvp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118846493 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
118846493
NCBI-ProteinID:
XP_036611000
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Position
4:386826011..387117794
Genome browser
AA seq
1703 aa
AA seq
DB search
MGSRMDPTSRVALQRCLLLFVLIVVLTERAHAGVKKYDVPCGGRDCSGGCQCFPEKGARG
QPGPVGPQGYSGPPGLQGIPGLQGRKGDKGERGAPGITGPKGDVGQRGVSGFPGADGIPG
HPGQGGPRGRPGSDGCNGTTGDAGTQGPPGSGGLPGLPGPQGPKGQKGEPYAFSQAERDR
YRGDSGVPGFIGLPGPPGYPGSPGKIGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKGE
KGDIGRPGPTGIPSDSDRAISITENILEQLDQYKGEKGSQGDPGWKGTSGKGEEGIVGYP
GQRGPAGHNGERGEPGEKGLRGADGYPGNDGFKGPPGDIGDRGPPGQPSYSPHPSLMKGI
RGDPGDSGARGPDGSPGEQGDPGLPGPPGTTRDGDGRRGLPGEMGAKGFIGDPGFPALYP
GPPGTDGQPGLQGPPGPPGPPGPDGFLFGLKGAEGSVGYPGPSGFPGTRGQKGWKGDPGD
CKCDVPSGLPGPRGPIGRPGANGEPGRKGELGDPGPHGIPGFPGFKGNPGIPGLPGLKGQ
KGDSREITTKGSRGDQGIPGIPGLQGEDGFPGQDGLDGFPGLPGLPGDGIKGLPGDPGFP
GVPGLKGIPGESGPPGLGLPGPKGEQGFPGDPGLSGSPGFPGPPGPPGAPGQTDCDGGVK
EPISQEIIRPGCVIAPKGSPGLPGLPGSPGAKGQRGIPGFPGADGFIGLKGFQGEAGREG
YPGPPGFVGPRGSKGATGLPGLDGSPGTAGLPGAVGPAGQKGLPGEVLGAQTGLPGDPGL
PGIPGSKGEPGNRGPPGFRGSPGMPGMPGLKGQPGFPGPSGQPGLPGPPGTHGFPGPQGQ
EGPPGLPGPSGFAGLPGDRGDRGDIGVPGPVGMKGLGGDRGDAGFIGEQGRRGEPGYQGI
PGMPGIPGTKGFKGSPGMEGFKGMLGIKGRPGIIGYKGEVGDFGIPGLKGLIGEPGLKGS
RGEPGPPGAPPKFLPGMKDFKGEKGDEGPVGGKGYWGIKGGQGMPGIPGQAGIPGLPGTP
GYIKGAKGEIGVPGVPGLQGFPGIIGSPGIRGFPGFVGIRGDKGMPGREGLFGETGSVGD
AGDEGDTINLPGRPGLKGELGISGLAGEKGFTGEKGTPGDRGFIGLMGIKGSQGLLGLKG
QTGFPGLTGLPGSQGDPGRAGPPGEKGDSGWPGVPGFSGFPGIKGLSGLDGLPGTKGLPG
SPGADGYGNPGFPGPFGDKGERGEPNTIPGPLGAPGQKGERGTLGGQGPSGSPGIQGFPG
FTAPSNISGLPGDKGAPGLFGLQGYRGPPGAPGPSSPPGIKGDVGSPGFTGERGPKGLAG
DPGPQGRPGVYGLPGEKGPKGQQGLMGYHGIPGNVGDRGPKGPKGDRGLPGTPGAIGSPG
IPGVPLRIATEPGVAGPHGRRGPVGIQGEMGPQGPPGDPGLRGLPGKPGPQGRGGISALP
GFRGDQGPMGHQGPVGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCPVGMN
KLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCHYASRNDKSYWLST
TAPLPMMPVAEEEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHT
AAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYFANKYSFWLTTIPEQNFQASPS
ADTLKAGLIRTHISRCQVCMKNL
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtagaatggacccaacttccagagttgcccttcagcggtgtctgctgctgttc
gtgctgatcgtagtgctaactgagagggcacacgctggtgtgaaaaaatatgatgtgccc
tgtggtggaagggactgcagcggaggttgtcaatgctttcctgagaaaggagcccggggt
caaccaggaccagttgggccacaagggtatagtggaccaccagggctacaaggtattcct
ggattacaaggacgaaaaggtgataaaggtgaacggggagcaccaggaataacagggccc
aaaggagatgtgggacaaagaggtgtttctggatttcctggcgctgatggaattcctggt
catccgggtcaaggtggaccccggggaagaccaggcagcgatggttgcaatggaaccact
ggagatgctggaacacagggacccccaggttctgggggtttacctgggctccctggacca
caaggacccaaaggtcagaaaggtgaaccttatgcattttctcaggctgaacgagataga
tacaggggtgattcaggagtacctggttttatcggtttacccggacctccaggttatcct
ggcagtccgggaaaaataggtcctgtcggagcccctgggcgaccgggacctccgggacct
ccaggaccaaaaggacaaccaggcaacagaggtcttggtttttatggcgaaaagggtgaa
aagggtgatattggacggcccggacccactggaattccatcagatagtgatcgtgctatt
tccattactgaaaatattctagaacagctggatcaatataagggtgaaaaaggaagccag
ggagacccaggctggaaaggaacttcaggaaaaggtgaagaagggatagtgggctatcca
ggacaacggggtccagcaggccacaatggtgaacgaggagaaccaggagagaaaggatta
agaggagctgatggatatccaggaaatgatggctttaaaggaccaccgggagacataggt
gaccgaggtccccctgggcaaccttcgtattcaccccatccctctctaatgaaaggtata
agaggtgatccaggagactcaggggctcgtggccctgatggaagtccaggtgaacaagga
gaccctggcctgccaggtcccccgggcacaacaagagatggagatggacgaagaggcctt
ccaggtgaaatgggagccaaaggttttataggtgacccaggttttccagctctatacccg
ggacctccaggtacagatggacaaccaggacttcaaggaccacctggacctcctggtcca
ccaggaccagatggatttctttttggacttaagggagctgagggaagtgtgggttaccca
ggcccttcaggattcccggggacacgaggacaaaaaggatggaaaggtgaccctggagac
tgtaaatgtgatgttcccagcggccttcctggtccacgaggacccattggtcgtcctggt
gcaaatggagaacctggaaggaaaggagaactgggtgacccaggcccacatggtattcct
ggtttccctggcttcaagggtaaccctggcattcctggcctacctgggcttaaaggacag
aagggagactctagagagattacaacaaaaggtagcagaggtgatcaaggcattcccggc
atacctggtttgcaaggtgaagatggctttccggggcaagatgggctagatggttttcca
ggtcttccaggtcttcctggtgatggcatcaaaggccttccaggagatccaggcttccca
ggagtacctggtttaaagggcattccaggagaaagtggtcctccgggcctaggtctacca
ggcccgaaaggtgaacaaggtttccccggtgaccctggactaagtggaagtcctggcttc
ccaggccctccgggacccccaggtgctccaggccaaacagactgtgatggaggtgtgaaa
gagccgattagccaggagataatccgcccaggttgtgtaatagcacctaaaggatctcca
gggctgcctgggctgccaggatctccaggtgctaaaggtcaaagagggattccaggattc
ccaggtgcagatggatttatcggactcaaaggattccaaggagaggcaggtcgtgaagga
tatccaggcccaccaggatttgttggacccagaggatccaaaggtgcaacagggctccct
ggactggatggaagcccaggcactgcagggctaccaggtgctgtaggaccagcgggacaa
aaaggactacctggagaagtcttaggtgcacagactggtctcccaggagatcctggtttg
cctggaatcccagggtcgaagggagaaccaggaaataggggacctccgggatttagagga
agcccaggtatgcctggaatgcctgggttgaagggtcagcctggattcccaggtccttca
ggtcagcctggattaccagggcctcccggaacacatggctttccaggacctcaaggccaa
gaaggaccaccaggtcttccagggccttcaggatttgcaggtctacctggtgatagaggt
gatcgaggtgacataggagtccctggccctgtggggatgaaaggtctgggtggtgacaga
ggtgatgctggttttataggagagcaaggcagaagaggagaacctggatatcaagggata
cctggaatgcctggcatcccaggaacaaaaggtttcaaagggtcccctggtatggaaggt
ttcaaaggtatgctgggtatcaaaggaagaccaggaatcattggatacaaaggagaggtt
ggcgattttggaattcctggtttgaaaggtctaattggtgaaccaggcttgaaaggtagt
cgtggagagccagggcctccaggagcacctccgaaattcctgccaggaatgaaagacttc
aaaggggaaaaaggagatgaaggacctgttggtgggaaaggatattggggcataaaaggt
ggacaaggaatgccaggcattcccggacaggcaggaattcctgggttacctgggacaccc
ggttacatcaaaggggccaaaggtgaaatcggtgttcctggagtgcctggtttgcaagga
ttccctggcataattggttctcctggtatcagaggctttcctggatttgtaggtattcgg
ggcgacaagggtatgcctggacgagaaggtctttttggtgagactggaagtgtaggagat
gctggtgatgagggagacactataaacttaccaggaaggccagggctgaagggagaactg
ggcatatctggacttgccggtgaaaagggatttacgggagaaaaaggcacgccaggagac
cgtggtttcataggattgatgggcataaaaggatctcaaggccttcttggactgaaagga
cagacaggtttcccaggactgacaggactgccaggatcccaaggagacccaggtcgtgct
ggacctcctggtgaaaagggagattctggatggccaggggttcccggcttctcaggtttc
cctggcatcaaaggactcagtggactggatggcttgccaggcactaaaggcttacccgga
tctccaggtgcagacggctacgggaatcccggcttccctggtccttttggtgacaaagga
gaaagaggagagcctaacacaattccaggtcccctgggagcaccagggcagaagggagag
aggggaaccctagggggacaaggtccttctggtagcccaggaattcaaggatttccagga
ttcactgcaccttccaatatctctgggttaccaggtgacaaaggagcaccaggtctattt
ggactacagggttatcgaggccccccaggagcacctggaccgtcatctccccctggaatt
aaaggagatgtaggaagtccaggatttacgggagaaaggggacccaaaggattggcagga
gatcctggaccccagggcagacctggagtgtatggactcccaggagaaaaagggcctaaa
ggacaacaagggctcatgggataccatgggataccaggaaatgttggtgacagaggcccc
aagggacctaaaggagacagaggattacctggcactcctggtgctataggatctcctgga
attccaggagtccccctgaggattgccacagaacctggggtggcaggtccccatggaagg
agagggcctgttggaatacaaggagagatgggtccccagggccctccaggtgatccaggt
ttacgaggactacctggaaaaccaggaccccaaggaagaggtggtatttcggcccttcca
ggattcagaggtgaccaaggtcccatgggtcatcaaggaccagtaggccaagaaggtgaa
ccaggacgaccaggaagtcccgggctacctggcatgccaggccgcagtgttagcatcggt
tatctcctggtgaaacacagccagactgatcaggagccaatgtgtccagttggaatgaat
aaactctggagtgggtacagtctcctgtactttgaaggccaagaaaaagcccacaaccaa
gaccttggactggctggctcgtgcttggctcgtttcagtaccatgcctttcctgtactgc
aaccctggagatgtctgccattatgccagccggaatgacaagtcctactggctctcaaca
actgcaccactgcccatgatgcccgtggcagaagaggaaatcaaaccctacatcagccgc
tgctctgtatgtgaagcccccgccgtggccattgctgtccatagccaagacgtctccatt
ccccactgtcctgcagggtggcgcagcctgtggatcggctactcctttctcatgcacact
gcagctggggacgagggtggcggacagtcgctggtatctcccggcagctgtctggaggac
ttccgagccacacccttcatcgaatgcaacgggggccgaggaacctgccactactttgcc
aacaagtacagcttttggctcaccaccattccagaacagaacttccaggcctccccttct
gcagacaccctcaaggcggggctcatccgaactcacatcagtcgttgccaggtctgcatg
aagaacctataa
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