KEGG   Trichosurus vulpecula (common brushtail): 118846575
Entry
118846575         CDS       T10126                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
tvp  Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tvp03036]
    118846575 (KDM4B)
Enzymes [BR:tvp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     118846575 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     118846575 (KDM4B)
Chromosome and associated proteins [BR:tvp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118846575 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C LBR_tudor DUF7141
Other DBs
NCBI-GeneID: 118846575
NCBI-ProteinID: XP_036611179
LinkDB
Position
1:70759776..71036810
AA seq 1136 aa
MGSENPSPQNPSCKIMTFRPTIEEFQDFGKYVAYIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGDYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYSIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYELWKQGKDITALDHMKPTALTSPELMAWNE
TKAVLKAKLLRRQISLKENRHWKKTEEERKPNIERKREQNRKPGLSSHRKRSQPRRHKTE
DQKSLGEVMAAETLLEEGKVKEEPKHGPDLEEEEQHKAPEGGEGDGKTKIRAPKAKSDKK
KKHHHHHHHHHHHHPPQPPQLLSPPPQLCTDEEAPPPPPPILEPPILAPVSTATEENFPL
AAPLNIVHPSEVPNEEDDFKPRPIIPMLYVVPRTNKVVFDKERVSCQQTLEHFAQKGQIW
REQTVPMELTVKEEERGEAEQVEISPKASEVQAPSTFSKLKMEIKKSRRHPLGKPPTRSP
LSVVKQEGSSDEEAFPFSGEEDVSDPEALKSLLSLQWKNKVHNFQAEKKFNAAAALVEPY
CAVCTLFYPYNQSLQTDKETSQAPVGETSSLLQLSKCGQKTKPLIPEMCFTSSGENTEPL
PANSYIGDDGTSLLIACAKCYLQVHASCYGIRPDLVNEGWTCSRCTANAWTAECCLCNLR
GGALQMTTDKRWIHVICAIAVPEVRFLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKIS
GACIQCSYEHCSTSFHVTCAHVAGVLMEPDDWPYVVSITCFKHKTGSQGVQFLREVSLGQ
TVITKNRNGLYYRCKVIGTTTQTFYEVNFDDGSYSDNLYPESIISRDCIQLGPPPEGEFV
QLRWTDGNIYKAKFISAVISHIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRLSVSTG
APQEKVSSGEEAKAAKRPRVGNARNSEDYGQNPDYLAFMESLLQSQYQPGAQSHMF
NT seq 3411 nt   +upstreamnt  +downstreamnt
atggggtccgagaatccaagtccacaaaaccctagctgtaagatcatgaccttccggcct
acgattgaggagtttcaggactttgggaaatatgtggcctacattgaatcccaaggagct
cacagagcaggacttgctaaggtgatcccaccaaaggagtggaaacctaggaaaacttat
gatgacattgatgacatggtgattccagctcccattcagcaggtggtaacaggacagtct
ggtttatttacccagtataacatacagaagaaacccatgacagtgggagattatcggcgc
ttggccaacagtgaaaagtattgtactcctcgacaccaagactttgaagatctggagcgt
aaatactggaagaacctgacttttgtatcaccaatttatggagctgatatcagtggttct
ttatatgatgcagatgtcgaggagtggaatattgggaatttgaacacccttttggacatg
gtggaacatgaatgtgggattatcatagaaggcgtgaacactccctacctgtactttggg
atgtggaaaaccacctttgcttggcacacagaagacatggatctctacagtatcaattac
ctgcactttggggagcccaaatcttggtatgccatacctccagaacatggcaaacgtctg
gaacgtctggcaaaagggtttttccctggcagttctcagggatgtgatgcctttctccgt
cacaagatgactctcatctctccctccatcttgaagaaatacagcatcccttttgatcgg
atcactcaggaggctggcgagtttatgatcacttttccctatggataccatgcaggattc
aatcatggcttcaactgtgctgagtcaaccaattttgccacgctgcggtggattgattat
ggcaagatggctactcagtgcacctgccgaaaggacatggtgaaaatttcaatggatgtt
tttgtgagagtgctgcagcccgagcgctatgagctgtggaaacaaggaaaggatattact
gctttggaccacatgaaacccactgcactaactagccctgaactgatggcttggaatgag
accaaggctgtgctgaaagctaagctccttcggagacaaattagtctgaaggaaaacaga
cactggaaaaagactgaggaggagagaaaaccaaatatagaaaggaagagagagcagaac
agaaagcctggcctatcgtcccacagaaaaagaagccagcctaggcggcataagacagaa
gaccagaagtctttgggagaggttatggctgcagaaacccttttggaggagggcaaagtg
aaggaagaacccaaacatgggcctgacctagaggaagaagagcagcacaaagctcccgaa
ggtggcgaaggggatggtaagaccaagatccgtgcccccaaggccaaaagtgataagaag
aagaagcaccaccaccaccaccaccatcatcaccatcaccacccacctcagccgcctcag
ttgttgtcacctccaccccagctctgtacagatgaagaggctcccccaccgccgcctccc
atattggagccccctatattagcaccagtctctactgccacagaagaaaactttccctta
gctgcccccctcaacattgtccacccctctgaggtgcccaacgaagaggatgactttaag
ccacgacctatcattcccatgctttatgtggttccacggaccaataaggtggtatttgac
aaagagcgtgtatcttgccagcaaacactcgagcactttgctcagaagggccagatttgg
agggaacagaccgtcccaatggagctaacagtgaaggaagaagaaaggggagaagctgag
caggtggagatcagtcccaaagccagtgaggttcaggccccatctaccttttctaagttg
aaaatggagatcaagaagagccggcgtcatccgctgggtaaaccaccaactcgatcccca
ttgtccgttgtcaaacaagagggctcaagtgatgaggaagcgtttcccttctctggagaa
gaggatgtgagtgaccctgaggccttgaagtctttactttccctccagtggaagaataaa
gtgcataacttccaggcagagaagaagttcaatgcggctgcagccctggtagagccatat
tgtgctgtctgtactctcttctacccatataaccagtccttacagacagataaagagact
tcccaggcccctgtgggggagacctcctcactacttcagctttccaagtgtggacagaag
accaagcccttgatcccagaaatgtgttttacttcaagcggtgagaataccgagcctctc
cctgcaaattcttatattggtgacgatggaaccagcctcctcattgcctgtgccaaatgc
tacttgcaagttcatgccagttgctacggaatccgtcctgatctggtaaatgaaggttgg
acctgttcccggtgcacagccaatgcctggacggcggaatgctgtttgtgtaacctcagg
ggaggagctcttcagatgacaaccgataaaaggtggatccatgtcatctgtgctattgct
gtcccagaagtacgatttcttaatgtaatagagcgtcaccctgtggatatcagtgcaata
ccagagcaacgatggaaattgaaatgtgtttactgtcgaaagcggatgaagaagatatct
ggagcttgcatccagtgttcgtacgagcactgctcaacttcttttcatgtgacctgtgcc
cacgtggctggggtcctaatggaacctgatgattggccctacgttgtgtctatcacttgc
tttaagcataaaacaggcagccaaggtgtccaatttctaagggaggtgtcattgggccag
acagttatcacaaagaaccgcaatggcctctattatcggtgcaaagtaattggcacaacc
acacagacattctatgaagtgaactttgatgatggttcctacagtgacaacttgtaccca
gagagcattattagcagagattgtatccagctgggaccccctcctgaaggggagtttgtt
cagctccggtggactgatggaaatatctataaagccaagttcatttcagctgtgatcagt
cacatttatcaggtggagtttgaggatggttcccagctgatggtgaagcgtggtgatatt
tacacccttgaggaggagctgcccaagagggtcaaatctagactgtctgtcagcacaggt
gctccacaagagaaagtatcctcaggagaggaggccaaggcagcgaagcgcccaagggtg
ggcaatgcccggaattctgaggactatggacagaatcctgattacctggccttcatggag
agcctcctgcagtcacaataccagcctggagcccagagccacatgttttag

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