KEGG   Trichosurus vulpecula (common brushtail): 118847622
Entry
118847622         CDS       T10126                                 
Name
(RefSeq) elongin-C-like
  KO
K03872  elongin-C
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp04066  HIF-1 signaling pathway
tvp04120  Ubiquitin mediated proteolysis
tvp05170  Human immunodeficiency virus 1 infection
tvp05200  Pathways in cancer
tvp05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118847622
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    118847622
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    118847622
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    118847622
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    118847622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tvp04121]
    118847622
   03400 DNA repair and recombination proteins [BR:tvp03400]
    118847622
Ubiquitin system [BR:tvp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     118847622
   Cul5 complex
     118847622
DNA repair and recombination proteins [BR:tvp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     118847622
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 118847622
NCBI-ProteinID: XP_036612061
LinkDB
Position
4:178404683..178405177
AA seq 96 aa
MYVKLISSDGHEFIVKREHALTTGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMY
FTYKVHYTNSSTEIPEFPIAPEIALELLMAANFLDC
NT seq 291 nt   +upstreamnt  +downstreamnt
atgtatgtgaaattgatatcttctgatggtcatgaatttattgtgaaaagggagcatgct
ttaacaacaggaacaataaaagccatgttaagtggcccgggtcagtttgctgaaaatgaa
accaatgaggttaattttagagaaattccatcacatgtgctatcaaaagtatgcatgtat
tttacctacaaggttcactacactaacagctctacagagattcctgaattcccaattgca
cctgaaattgcgctggaattgctgatggctgcgaacttcctagattgttaa

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