Trichosurus vulpecula (common brushtail): 118847792
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Entry
118847792 CDS
T10126
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03013
Nucleocytoplasmic transport
tvp03015
mRNA surveillance pathway
tvp03040
Spliceosome
tvp05014
Amyotrophic lateral sclerosis
tvp05168
Herpes simplex virus 1 infection
Brite
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118847792 (ALYREF)
TREX complex
118847792 (ALYREF)
Spliceosome [BR:
tvp03041
]
Complex C
Other components
EJC/TREX
118847792 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118847792 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118847792
NCBI-ProteinID:
XP_036612313
LinkDB
All DBs
Position
4:214842503..214846355
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AA seq
258 aa
AA seq
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MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGAQGGRGGGGAQAAARVSRGGGPVRNRP
AMARGGAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSD
ADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQ
LVTSQIDTQRRPTQSVNRGGMTRNRGSGGFGGGGGTRRGSRGGNRGRGRGTGRNSKQQLS
AEELDAQLDAYNARMDTS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgacatcattaaactcaaccggagccagcgg
ggcggacgcggcgggggccggggccgaggccgggccggagcccagggcggccgcggcggc
gggggcgcgcaggcggcagcccgcgtgagccgaggcgggggccccgttcggaacaggccg
gccatggcccgcggaggcgccgggggcggcggcaggaaccgacccgcgccctacagccga
ccaaaacagcttccagataaatggcaacacgacctgttcgacagcggctttggaggcggg
gctggcgtggagaccggtgggaaattgctggtctccaatctggattttggggtctcagat
gcggatattcaggaactatttgctgaatttggaactctgaaaaaggcagctgtacattat
gatcggtctggccggagcttaggaacagcagatgttcactttgagcgaaaagcagatgct
ctgaaggccatgaaacagtataacggagtccctttggatggtcgccctatgaatattcag
cttgttacatcacagatcgatacacaacgaagacctacacagagtgtaaatagaggcgga
atgactagaaaccgtggctctggtggttttggtggtggaggtggcacccggagaggcagt
cgtggaggcaatcgaggaagaggcagagggactggaagaaattcgaaacaacagctttcc
gcagaagaactagatgcacaattggatgcttataatgccaggatggataccagttaa
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integrated database retrieval system
