Trichosurus vulpecula (common brushtail): 118848064
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Entry
118848064 CDS
T10126
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03030
DNA replication
tvp03410
Base excision repair
tvp03420
Nucleotide excision repair
tvp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118848064 (RFC5)
03410 Base excision repair
118848064 (RFC5)
03420 Nucleotide excision repair
118848064 (RFC5)
03430 Mismatch repair
118848064 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvp03032
]
118848064 (RFC5)
03036 Chromosome and associated proteins [BR:
tvp03036
]
118848064 (RFC5)
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118848064 (RFC5)
DNA replication proteins [BR:
tvp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118848064 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
118848064 (RFC5)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118848064 (RFC5)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118848064 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
118848064 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_22
AAA_11
AAA_24
AAA_assoc_2
AAA_14
RuvB_N
DEAD
DUF815
ResIII
AAA_5
AAA_19
PhoH
ATPase_2
AAA_30
TIP49
AAA_7
TniB
DNAX_ATPase_lid
nSTAND3
bpMoxR
Mg_chelatase
Thioredoxin_6
AAA_3
NPHP3_N
AAA_2
AAA_25
Gp44_lid
Motif
Other DBs
NCBI-GeneID:
118848064
NCBI-ProteinID:
XP_036612701
LinkDB
All DBs
Position
1:complement(26597981..26614212)
Genome browser
AA seq
340 aa
AA seq
DB search
MEAQAVGRQQQQPAARSRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFNSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVIKEENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPPPVRIH
LLIKMADIEHRLAVGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccaggccgtggggcggcagcaacagcagcctgcggccagaagcaggaacctg
ccctgggttgaaaaatatcgaccacagacactgaatgacctaatctctcatcaggatatc
ctaagcaccatccaaaaatttatcagtgaagatcgactgccacatctgcttctctatggc
ccccccgggacaggaaagacatccaccatcttggcctgtgccaaacaactctacaaagac
aaggagttcaactctatggtcctggagctcaatgcttctgatgaccgaggaatagatatt
gtacggggaccaatcctgagctttgccagcacaaggacaatatttaagaaaggttttaaa
cttgtgatattggatgaggcagatgccatgacacaggatgcccagaatgccttgagaaga
gtgattgagaagttcacagagaataccaggttttgcctcatctgtaattatctgtcaaag
atcatccccgccctgcagtctcgatgtacaaggttccgatttggccccttgactcctgag
ctgatggttccccgcctggagcacgtcataaaagaggagaatgttgacataagcgaagat
ggaatgaaagcgctggtcaccctttccagtggtgatatgcgaagggccctaaacattttg
cagagcaccaacatggcctttgggaaggtgaccgaggagacagtgtacacctgtacagga
cacccactcaagtctgacatcgccaacattctggattggatgctgaaccaggactttacc
acggcctacaggaatatcatggaactgaaaacactgaagggtttggcattgcacgatatt
ctgacagagatacacttatttgtacatcgagttgactttccacctccagttcgaatacat
ttgctcatcaaaatggcagacattgaacacagacttgctgtcggcacaagtgagaagatt
cagctaagttccctcattgctgcttttcaagtcaccagagatttaattgtagcagaagcc
tga
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integrated database retrieval system
